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The map label for this gene is fliD [H]

Identifier: 203284073

GI number: 203284073

Start: 160414

End: 162414

Strand: Reverse

Name: fliD [H]

Synonym: BDU_151

Alternate gene names: 203284073

Gene position: 162414-160414 (Counterclockwise)

Preceding gene: 203284076

Following gene: 203284072

Centisome position: 17.43

GC content: 28.74

Gene sequence:

>2001_bases
ATGTCTTCTGGATTTTTTGTTCCTGGTGTAGATAATAAATATAATACCAAAGAAATCCGTGAATCAATGCTTAAGCCTGA
TAAGTCTAAAATAGATTCGTCTGTGCAAAAGCTTGAAAGTTTGCAACAGGAAAAACGTGCTTGGCAAACAATTAATAAAA
AGGTATCTGTTTTGAATTCTCTTGCAAAACAAATTACATCTCTTGATGGTCCTTTTAATTATATGTCGGGTAATTCTAGC
AATAATGATGTTCTGTCTGTTTCTGCTCGTTATGGGGCTAAAAATGAAAATTATAAAATCGGTGTTAATCAAATAGCAAG
TTCTGATGTTTTCTTATCTGCAAATTTTAAACAAAAAGAAATTAATATTCCTGTAGGAGAATATACATTTTTAGTTGGGA
AGAAAGAAATTAAGATTAGAAATAATGGAGATCTTGAATCTCTTGTTAGAGATGTTAATAATAGAGGCAAGGGATTTTTG
TCTGCTAAAATTGTTAAGAGTGATAGTTCTGGTAATAGTAGGTTAATTTTGCAGTCTTTAAAGGAAGGTGAAAATAATAG
ACTTATTATGAAAGATGAAGCTTTAAATCTTGCTAAGAAAATAGGCATTTTAAGTGAACGTACGACAAATTTTAGTCCAA
ATATAAGGGAAATTGTTAATAGTCAACAAAATAGTAGTAATAAAATTTTTCTTGATAAAGATGATATTGTGTTAGAGCCC
CTTTCAGAGATTGCAATAAGTATTCCAGACAATATTGAAATTGGTAAGGGGAGTAAAATTAAATTTGAAATTAAATATTA
TGATATGGATGATAAGAGTATTTTAAATGAAATAGTTTTTAATCCTGGTGAGGCTACATTTGAGGGTGCTAAAGTTGAAG
GTGAGGATAGTATTATTAATCTTGAATCTGATTATAAACCTTTTTTGAAAGAAAAAAAATATATTCAAATGAATATGATT
AAGATTCACAGTGGTACAGGTTCTTTAGAATTACCCCCAATCAATGTTGCAAGTGATTTTGAAAAAGTTGAGGTTGAAGT
TGGGTCTCTTTTAGGTTTAAAGGAGATTAATATTGAGAATAAATTAAATAATAAGGCTTTTGTTATTCGAAATATTGAAA
TATTTGATCCAAAAAACAGAGATGGTCATTTGCCAATTAATGCTAAAAGCTTTGCAGAGAATGCAAAAATGAAGTTTGAT
GGAGTTGATGTTGAACGAGATTCGAATACTATTAATGATTTAATACCAAATGTTACATTAAATTTAAAACAGTCATCAGA
TGATACTGTTGATGTGCGTGTTGAACCTGATTATGAAGGGATTAGGAAACTTTTATTAGATTTTTTAATTGCCTATAATG
AAGTTTTGGCTGGGATTAATATTGTAAGCTTGAATGAAGATAATGTGGATACTCAAAAGTCAGATTTATTAGAGGAATGG
TCTTATTTAAATGAAGAGGAAAAGGAAGAGGCTTATAAAAATTTGGGAATTCTTAGAAGTGAATTTACACTGAAAAATCT
TAAATCAAGATTAGAATCAATAATGTTTAATGTTTATAGAACAAATGATCCTAATTTTTCACTTATTAATCAGATGGGAG
TTTTTACTAGTTCTATGTCTTCATCAGGAGGATTTTCACGTTATTTAAAACTTGATGAGAAGAAATTTAATGAGGTTTTA
CAGAGTAATATTAGTTCAGTTAAAGAGTTTTTTGCGTTTGATTTTAATGATGATAGAATTTATGATGATGGGCTTGCTAA
GGTGCTTGGTGATTATTTGTCTCTCTTAATAGGTGCTGGGGGATTTATTTATAATAAGATAAAAAGTTATGATTTTAGAA
TTCCCAATCAAAAAAATATGGTTGAAGATTATAAAAGGAAATATGAAGAGAGAGAAAGAAAGGTTGAAGGAGAACTTAAT
ACTTTGGATTTTACTGTAAAGCGAATGAAAGAACAGGAAGAAATTCTTAAGTCTTTAAATTTATATAGACAAAACAAGTA
A

Upstream 100 bases:

>100_bases
CTAAAATTAGATTTTTATTATTGGCTTTAAAGTATAATATTATTTCTTATGTAATATCTATATGTTTTTATGTTAAACTT
TCTACTTAAGAGGTGTTGTA

Downstream 100 bases:

>100_bases
CAAATTTAATTTAAATGAATATTGTATTTATTTTTTTCTTGTTTTTGTGATATCCTTTTAAAAAGACGACAAATGGATTT
GTCGAAAACATCAAAATTAT

Product: flagellar hook-associated protein FliD

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 666; Mature: 665

Protein sequence:

>666_residues
MSSGFFVPGVDNKYNTKEIRESMLKPDKSKIDSSVQKLESLQQEKRAWQTINKKVSVLNSLAKQITSLDGPFNYMSGNSS
NNDVLSVSARYGAKNENYKIGVNQIASSDVFLSANFKQKEINIPVGEYTFLVGKKEIKIRNNGDLESLVRDVNNRGKGFL
SAKIVKSDSSGNSRLILQSLKEGENNRLIMKDEALNLAKKIGILSERTTNFSPNIREIVNSQQNSSNKIFLDKDDIVLEP
LSEIAISIPDNIEIGKGSKIKFEIKYYDMDDKSILNEIVFNPGEATFEGAKVEGEDSIINLESDYKPFLKEKKYIQMNMI
KIHSGTGSLELPPINVASDFEKVEVEVGSLLGLKEINIENKLNNKAFVIRNIEIFDPKNRDGHLPINAKSFAENAKMKFD
GVDVERDSNTINDLIPNVTLNLKQSSDDTVDVRVEPDYEGIRKLLLDFLIAYNEVLAGINIVSLNEDNVDTQKSDLLEEW
SYLNEEEKEEAYKNLGILRSEFTLKNLKSRLESIMFNVYRTNDPNFSLINQMGVFTSSMSSSGGFSRYLKLDEKKFNEVL
QSNISSVKEFFAFDFNDDRIYDDGLAKVLGDYLSLLIGAGGFIYNKIKSYDFRIPNQKNMVEDYKRKYEERERKVEGELN
TLDFTVKRMKEQEEILKSLNLYRQNK

Sequences:

>Translated_666_residues
MSSGFFVPGVDNKYNTKEIRESMLKPDKSKIDSSVQKLESLQQEKRAWQTINKKVSVLNSLAKQITSLDGPFNYMSGNSS
NNDVLSVSARYGAKNENYKIGVNQIASSDVFLSANFKQKEINIPVGEYTFLVGKKEIKIRNNGDLESLVRDVNNRGKGFL
SAKIVKSDSSGNSRLILQSLKEGENNRLIMKDEALNLAKKIGILSERTTNFSPNIREIVNSQQNSSNKIFLDKDDIVLEP
LSEIAISIPDNIEIGKGSKIKFEIKYYDMDDKSILNEIVFNPGEATFEGAKVEGEDSIINLESDYKPFLKEKKYIQMNMI
KIHSGTGSLELPPINVASDFEKVEVEVGSLLGLKEINIENKLNNKAFVIRNIEIFDPKNRDGHLPINAKSFAENAKMKFD
GVDVERDSNTINDLIPNVTLNLKQSSDDTVDVRVEPDYEGIRKLLLDFLIAYNEVLAGINIVSLNEDNVDTQKSDLLEEW
SYLNEEEKEEAYKNLGILRSEFTLKNLKSRLESIMFNVYRTNDPNFSLINQMGVFTSSMSSSGGFSRYLKLDEKKFNEVL
QSNISSVKEFFAFDFNDDRIYDDGLAKVLGDYLSLLIGAGGFIYNKIKSYDFRIPNQKNMVEDYKRKYEERERKVEGELN
TLDFTVKRMKEQEEILKSLNLYRQNK
>Mature_665_residues
SSGFFVPGVDNKYNTKEIRESMLKPDKSKIDSSVQKLESLQQEKRAWQTINKKVSVLNSLAKQITSLDGPFNYMSGNSSN
NDVLSVSARYGAKNENYKIGVNQIASSDVFLSANFKQKEINIPVGEYTFLVGKKEIKIRNNGDLESLVRDVNNRGKGFLS
AKIVKSDSSGNSRLILQSLKEGENNRLIMKDEALNLAKKIGILSERTTNFSPNIREIVNSQQNSSNKIFLDKDDIVLEPL
SEIAISIPDNIEIGKGSKIKFEIKYYDMDDKSILNEIVFNPGEATFEGAKVEGEDSIINLESDYKPFLKEKKYIQMNMIK
IHSGTGSLELPPINVASDFEKVEVEVGSLLGLKEINIENKLNNKAFVIRNIEIFDPKNRDGHLPINAKSFAENAKMKFDG
VDVERDSNTINDLIPNVTLNLKQSSDDTVDVRVEPDYEGIRKLLLDFLIAYNEVLAGINIVSLNEDNVDTQKSDLLEEWS
YLNEEEKEEAYKNLGILRSEFTLKNLKSRLESIMFNVYRTNDPNFSLINQMGVFTSSMSSSGGFSRYLKLDEKKFNEVLQ
SNISSVKEFFAFDFNDDRIYDDGLAKVLGDYLSLLIGAGGFIYNKIKSYDFRIPNQKNMVEDYKRKYEERERKVEGELNT
LDFTVKRMKEQEEILKSLNLYRQNK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 75758; Mature: 75626

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGFFVPGVDNKYNTKEIRESMLKPDKSKIDSSVQKLESLQQEKRAWQTINKKVSVLNS
CCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAKQITSLDGPFNYMSGNSSNNDVLSVSARYGAKNENYKIGVNQIASSDVFLSANFKQKE
HHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHCCCCEEEECCCCCCE
INIPVGEYTFLVGKKEIKIRNNGDLESLVRDVNNRGKGFLSAKIVKSDSSGNSRLILQSL
ECCCCCCEEEEEECEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHH
KEGENNRLIMKDEALNLAKKIGILSERTTNFSPNIREIVNSQQNSSNKIFLDKDDIVLEP
HCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEECCCCHHHCC
LSEIAISIPDNIEIGKGSKIKFEIKYYDMDDKSILNEIVFNPGEATFEGAKVEGEDSIIN
HHHHEEECCCCCEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCEECCCCCEEE
LESDYKPFLKEKKYIQMNMIKIHSGTGSLELPPINVASDFEKVEVEVGSLLGLKEINIEN
CCCCCCHHHHCCCEEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCEEEECCCC
KLNNKAFVIRNIEIFDPKNRDGHLPINAKSFAENAKMKFDGVDVERDSNTINDLIPNVTL
CCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCHHHHHCCCCEE
NLKQSSDDTVDVRVEPDYEGIRKLLLDFLIAYNEVLAGINIVSLNEDNVDTQKSDLLEEW
EEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH
SYLNEEEKEEAYKNLGILRSEFTLKNLKSRLESIMFNVYRTNDPNFSLINQMGVFTSSMS
HHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCC
SSGGFSRYLKLDEKKFNEVLQSNISSVKEFFAFDFNDDRIYDDGLAKVLGDYLSLLIGAG
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHCC
GFIYNKIKSYDFRIPNQKNMVEDYKRKYEERERKVEGELNTLDFTVKRMKEQEEILKSLN
HHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LYRQNK
HHHCCC
>Mature Secondary Structure 
SSGFFVPGVDNKYNTKEIRESMLKPDKSKIDSSVQKLESLQQEKRAWQTINKKVSVLNS
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAKQITSLDGPFNYMSGNSSNNDVLSVSARYGAKNENYKIGVNQIASSDVFLSANFKQKE
HHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHCCCCEEEECCCCCCE
INIPVGEYTFLVGKKEIKIRNNGDLESLVRDVNNRGKGFLSAKIVKSDSSGNSRLILQSL
ECCCCCCEEEEEECEEEEEECCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHH
KEGENNRLIMKDEALNLAKKIGILSERTTNFSPNIREIVNSQQNSSNKIFLDKDDIVLEP
HCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCEEEECCCCHHHCC
LSEIAISIPDNIEIGKGSKIKFEIKYYDMDDKSILNEIVFNPGEATFEGAKVEGEDSIIN
HHHHEEECCCCCEECCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCEECCCCCEEE
LESDYKPFLKEKKYIQMNMIKIHSGTGSLELPPINVASDFEKVEVEVGSLLGLKEINIEN
CCCCCCHHHHCCCEEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCEEEECCCC
KLNNKAFVIRNIEIFDPKNRDGHLPINAKSFAENAKMKFDGVDVERDSNTINDLIPNVTL
CCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCHHHHHCCCCEE
NLKQSSDDTVDVRVEPDYEGIRKLLLDFLIAYNEVLAGINIVSLNEDNVDTQKSDLLEEW
EEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH
SYLNEEEKEEAYKNLGILRSEFTLKNLKSRLESIMFNVYRTNDPNFSLINQMGVFTSSMS
HHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCC
SSGGFSRYLKLDEKKFNEVLQSNISSVKEFFAFDFNDDRIYDDGLAKVLGDYLSLLIGAG
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHCC
GFIYNKIKSYDFRIPNQKNMVEDYKRKYEERERKVEGELNTLDFTVKRMKEQEEILKSLN
HHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LYRQNK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685; 9168617 [H]