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The map label for this gene is rsgA

Identifier: 203284024

GI number: 203284024

Start: 107806

End: 108747

Strand: Reverse

Name: rsgA

Synonym: BDU_102

Alternate gene names: 203284024

Gene position: 108747-107806 (Counterclockwise)

Preceding gene: 203284025

Following gene: 203284023

Centisome position: 11.67

GC content: 28.24

Gene sequence:

>942_bases
TTGAATAGTAGTACATTTGAGGTTCTCTGGGGTGTTAATAATATTTATTCTGTTGTTGAAGTTAATACTAATACAGTTTA
TGAGGGTGTTATTAAAGGTAAATTCTTAAATACTAGGGAGAAAGAGTATAGTCCTTTAGTTCCGGGTGATTTTGTTTGTG
GTGATATTTATGATGAACATAAGGTATACATTAAAGAGAGAATGGAACGTAGAAATGTTTTTTGGCGTTATAATAAAAAG
GTTGCTTTAAGGCAAGTGATTGTTTCAAATATCGATAATATTTTGATTGTAAGTTCTGCTACTCTTCCAGAATTTAAAAA
TTCATTTATTGATAGAACATTGATAGTTGCTGAGGAGCAGGGAATTACCCCTATTATTTTGGTAAATAAGGTTGATGAAG
GCATAAATCTGAGGGTTGATTCTTTTATTAAGATTTATGAATATTTAGGTTATAGAGTTATTAAGACTTCTGTTGTTACT
TTGCAGGGAATTGATGAGGTGAAAAAAATTATTAAAAATTCAAGAACTTCTTTTATTGGGCAGTCTGGAGTTGGAAAATC
TTCACTTATAAATGTTATAGATTTAAATGCATCTCAGGCTATAAATGAGATATCTTATAAGTATGCACGAGGCAGACATA
CTACGGTTTATGCTGTGGCTTTTCATTCTGATAATAAAATTTTAATTGATACTCCTGGAATAAAGGAATTTGGCATTGAA
GGTTTAGGATATCTTGAGCTTAAATATTATTTTAAAGAATTTAAATATTTTAATGATTTATGTAGATTTAATTCTTGTTT
ACATATCAATGAGCCAAATTGTTTTGTAATAAGTCAAATTGGATTTAAAATTGCAGAAGCTAGGTATAATAGTTATTTGA
AAATTTTTAGTGAACTTAAGAGATATAAAAGTTATGCAAGAGAAATATTTGGAAAAAATTGA

Upstream 100 bases:

>100_bases
ATTGTTTTAAACGTTATTTTTATTTAACACAAGATAAAAATTTACACTTTTATAAGAATTTTTGTGAAAAATATAATTTT
TATTTTAAAGGAATATTCAA

Downstream 100 bases:

>100_bases
TTTTTATCAAATATTATCTTCAGTTGCATCTTATGTAACTGTTTCAGATACGGTTAAACTTTTAAATGAACAGCAAATAT
TAAAAACTGATAGAGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNSSTFEVLWGVNNIYSVVEVNTNTVYEGVIKGKFLNTREKEYSPLVPGDFVCGDIYDEHKVYIKERMERRNVFWRYNKK
VALRQVIVSNIDNILIVSSATLPEFKNSFIDRTLIVAEEQGITPIILVNKVDEGINLRVDSFIKIYEYLGYRVIKTSVVT
LQGIDEVKKIIKNSRTSFIGQSGVGKSSLINVIDLNASQAINEISYKYARGRHTTVYAVAFHSDNKILIDTPGIKEFGIE
GLGYLELKYYFKEFKYFNDLCRFNSCLHINEPNCFVISQIGFKIAEARYNSYLKIFSELKRYKSYAREIFGKN

Sequences:

>Translated_313_residues
MNSSTFEVLWGVNNIYSVVEVNTNTVYEGVIKGKFLNTREKEYSPLVPGDFVCGDIYDEHKVYIKERMERRNVFWRYNKK
VALRQVIVSNIDNILIVSSATLPEFKNSFIDRTLIVAEEQGITPIILVNKVDEGINLRVDSFIKIYEYLGYRVIKTSVVT
LQGIDEVKKIIKNSRTSFIGQSGVGKSSLINVIDLNASQAINEISYKYARGRHTTVYAVAFHSDNKILIDTPGIKEFGIE
GLGYLELKYYFKEFKYFNDLCRFNSCLHINEPNCFVISQIGFKIAEARYNSYLKIFSELKRYKSYAREIFGKN
>Mature_313_residues
MNSSTFEVLWGVNNIYSVVEVNTNTVYEGVIKGKFLNTREKEYSPLVPGDFVCGDIYDEHKVYIKERMERRNVFWRYNKK
VALRQVIVSNIDNILIVSSATLPEFKNSFIDRTLIVAEEQGITPIILVNKVDEGINLRVDSFIKIYEYLGYRVIKTSVVT
LQGIDEVKKIIKNSRTSFIGQSGVGKSSLINVIDLNASQAINEISYKYARGRHTTVYAVAFHSDNKILIDTPGIKEFGIE
GLGYLELKYYFKEFKYFNDLCRFNSCLHINEPNCFVISQIGFKIAEARYNSYLKIFSELKRYKSYAREIFGKN

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=225, Percent_Identity=36.8888888888889, Blast_Score=135, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_BORDL (B5RLH3)

Other databases:

- EMBL:   CP000976
- RefSeq:   YP_002221764.1
- EnsemblBacteria:   EBBORT00000001542
- GeneID:   6918186
- GenomeReviews:   CP000976_GR
- KEGG:   bdu:BDU_102
- GeneTree:   EBGT00050000006830
- HOGENOM:   HBG652450
- OMA:   TRARGVF
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR004881
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258

EC number: NA

Molecular weight: Translated: 36095; Mature: 36095

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSTFEVLWGVNNIYSVVEVNTNTVYEGVIKGKFLNTREKEYSPLVPGDFVCGDIYDEH
CCCCEEEEEECCCCEEEEEEECCCCEEHHHHCCCEECCCCCCCCCCCCCCEEECCCCCHH
KVYIKERMERRNVFWRYNKKVALRQVIVSNIDNILIVSSATLPEFKNSFIDRTLIVAEEQ
HHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCEEEEEEECC
GITPIILVNKVDEGINLRVDSFIKIYEYLGYRVIKTSVVTLQGIDEVKKIIKNSRTSFIG
CCCEEEEEEECCCCCCEEHHHHHHHHHHHCEEEEHEEEEEECCHHHHHHHHHCCCHHHCC
QSGVGKSSLINVIDLNASQAINEISYKYARGRHTTVYAVAFHSDNKILIDTPGIKEFGIE
CCCCCHHHEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEECCCCHHHCCC
GLGYLELKYYFKEFKYFNDLCRFNSCLHINEPNCFVISQIGFKIAEARYNSYLKIFSELK
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
RYKSYAREIFGKN
HHHHHHHHHHCCC
>Mature Secondary Structure
MNSSTFEVLWGVNNIYSVVEVNTNTVYEGVIKGKFLNTREKEYSPLVPGDFVCGDIYDEH
CCCCEEEEEECCCCEEEEEEECCCCEEHHHHCCCEECCCCCCCCCCCCCCEEECCCCCHH
KVYIKERMERRNVFWRYNKKVALRQVIVSNIDNILIVSSATLPEFKNSFIDRTLIVAEEQ
HHHHHHHHHHCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCEEEEEEECC
GITPIILVNKVDEGINLRVDSFIKIYEYLGYRVIKTSVVTLQGIDEVKKIIKNSRTSFIG
CCCEEEEEEECCCCCCEEHHHHHHHHHHHCEEEEHEEEEEECCHHHHHHHHHCCCHHHCC
QSGVGKSSLINVIDLNASQAINEISYKYARGRHTTVYAVAFHSDNKILIDTPGIKEFGIE
CCCCCHHHEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEECCCCHHHCCC
GLGYLELKYYFKEFKYFNDLCRFNSCLHINEPNCFVISQIGFKIAEARYNSYLKIFSELK
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
RYKSYAREIFGKN
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA