Definition Borrelia duttonii Ly, complete genome.
Accession NC_011229
Length 931,674

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The map label for this gene is 203283989

Identifier: 203283989

GI number: 203283989

Start: 68956

End: 70011

Strand: Reverse

Name: 203283989

Synonym: BDU_67

Alternate gene names: NA

Gene position: 70011-68956 (Counterclockwise)

Preceding gene: 203283990

Following gene: 203283987

Centisome position: 7.51

GC content: 28.69

Gene sequence:

>1056_bases
TTGATGGATAATAAACCACCACATAATCAGTTATTTTTGGATAGTCAAAATCTAAGTGATGGTAATTTGCATGAATTTAG
AGAAAATCATGATAATAAAATTCATGATTTGCCCGAGCATGTGTCTAGGGGTTTAGTGCTTACTATTGTTGGGTCTTTAA
TTATTTCATGTGCGATATTTTTTATTTTTTTAAAGAGTAGTGATATTGTTGTTGTTCCAAATCTAAGTGGACTTTATATT
GAAGAGGCAATTACTGAGCTTCAACATAAAGAATTAATTCCTTATGTTGAACTTAAGTTCTCATCAACTTCGCTTGATAA
AGGTAAGGTTATAGATCAAAAACCTAAGGCAGGTACTGTTTTGAGACTTGATAGTAAGGTTAAAATCTTTATTAGTAAAG
GAGCTGTGATAAATAAAGTTGATAATTTTATTGGCAAGAATATTGATGATGTTCTTATTAATTTGAAAGCCAATGCAATT
AATAATAATAGGATGCTTTATCATTTGTTAAGGCCTGTTGAAATTGAGAGTACTCTTCCAAAAGGAACAATAATTCGACA
AGAACCATCACCAGGTACTAAGATTGCGAGTTTAGTTGATCTTCAATTTTTAGTAAGTAAAGGTCAAGAAGATTCGTCTG
TTAAATATATAAAAAATTATGTTGGACTCTATTATAAAGATGTGATAATTTCTCTTTTAAATGATGAGATTGATTTTGAT
GTCAATGTTTCTAAGGGTAATGATTTTGGGAGTGTTATTTATCAATCTTTATCTCCTGGAAATAGGATTGAAAACTTAGA
TAAATTGATAATTACTATTAATGAACCAAGAGTTAATAGTACAAGTGTGTTTGGAATTATGACTTATAAATTGGATGTAT
ATTCATCTAGTGTAGATATTATGTTAAAAGTAAAAGATTCTAGTGGAAATAGTTCTTTATTTTATTCTTTTAGATCTAAA
GGTGGACTTATTAAATTGCCTTATGAGGCAGTAAAAGGCTCGACAGTTGAGCTTTATATTCATGATAAACTTATAAATCA
AACATTAGTGAATTGA

Upstream 100 bases:

>100_bases
TGGGAAAAAAGTTTTAGATTGTGTATCATTTTATCATGGAAATAGAGATTTAATAGGCAAGGTTTTTTCTTAAAATAAAG
TGTAAGGAGATGATATAATA

Downstream 100 bases:

>100_bases
AATAATGAAGACAAAATTTTATTTTTGAGTTTAATATATCTTTATACATTTTCAATGTATAAAGATATTATTATTAATCA
TTTATTTTTGATGTAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MMDNKPPHNQLFLDSQNLSDGNLHEFRENHDNKIHDLPEHVSRGLVLTIVGSLIISCAIFFIFLKSSDIVVVPNLSGLYI
EEAITELQHKELIPYVELKFSSTSLDKGKVIDQKPKAGTVLRLDSKVKIFISKGAVINKVDNFIGKNIDDVLINLKANAI
NNNRMLYHLLRPVEIESTLPKGTIIRQEPSPGTKIASLVDLQFLVSKGQEDSSVKYIKNYVGLYYKDVIISLLNDEIDFD
VNVSKGNDFGSVIYQSLSPGNRIENLDKLIITINEPRVNSTSVFGIMTYKLDVYSSSVDIMLKVKDSSGNSSLFYSFRSK
GGLIKLPYEAVKGSTVELYIHDKLINQTLVN

Sequences:

>Translated_351_residues
MMDNKPPHNQLFLDSQNLSDGNLHEFRENHDNKIHDLPEHVSRGLVLTIVGSLIISCAIFFIFLKSSDIVVVPNLSGLYI
EEAITELQHKELIPYVELKFSSTSLDKGKVIDQKPKAGTVLRLDSKVKIFISKGAVINKVDNFIGKNIDDVLINLKANAI
NNNRMLYHLLRPVEIESTLPKGTIIRQEPSPGTKIASLVDLQFLVSKGQEDSSVKYIKNYVGLYYKDVIISLLNDEIDFD
VNVSKGNDFGSVIYQSLSPGNRIENLDKLIITINEPRVNSTSVFGIMTYKLDVYSSSVDIMLKVKDSSGNSSLFYSFRSK
GGLIKLPYEAVKGSTVELYIHDKLINQTLVN
>Mature_351_residues
MMDNKPPHNQLFLDSQNLSDGNLHEFRENHDNKIHDLPEHVSRGLVLTIVGSLIISCAIFFIFLKSSDIVVVPNLSGLYI
EEAITELQHKELIPYVELKFSSTSLDKGKVIDQKPKAGTVLRLDSKVKIFISKGAVINKVDNFIGKNIDDVLINLKANAI
NNNRMLYHLLRPVEIESTLPKGTIIRQEPSPGTKIASLVDLQFLVSKGQEDSSVKYIKNYVGLYYKDVIISLLNDEIDFD
VNVSKGNDFGSVIYQSLSPGNRIENLDKLIITINEPRVNSTSVFGIMTYKLDVYSSSVDIMLKVKDSSGNSSLFYSFRSK
GGLIKLPYEAVKGSTVELYIHDKLINQTLVN

Specific function: Unknown

COG id: COG2815

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PASTA domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005543 [H]

Pfam domain/function: PF03793 PASTA [H]

EC number: NA

Molecular weight: Translated: 39279; Mature: 39279

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDNKPPHNQLFLDSQNLSDGNLHEFRENHDNKIHDLPEHVSRGLVLTIVGSLIISCAIF
CCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
FIFLKSSDIVVVPNLSGLYIEEAITELQHKELIPYVELKFSSTSLDKGKVIDQKPKAGTV
HHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEE
LRLDSKVKIFISKGAVINKVDNFIGKNIDDVLINLKANAINNNRMLYHLLRPVEIESTLP
EEECCEEEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCEEECCCCC
KGTIIRQEPSPGTKIASLVDLQFLVSKGQEDSSVKYIKNYVGLYYKDVIISLLNDEIDFD
CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VNVSKGNDFGSVIYQSLSPGNRIENLDKLIITINEPRVNSTSVFGIMTYKLDVYSSSVDI
EEECCCCCHHHHHHHHCCCCCHHCCCEEEEEEECCCCCCCCEEEEEEEEEEEEECCCEEE
MLKVKDSSGNSSLFYSFRSKGGLIKLPYEAVKGSTVELYIHDKLINQTLVN
EEEEECCCCCCEEEEEEECCCCEEECCHHHHCCCEEEEEEEHHHHHHHHCC
>Mature Secondary Structure
MMDNKPPHNQLFLDSQNLSDGNLHEFRENHDNKIHDLPEHVSRGLVLTIVGSLIISCAIF
CCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHH
FIFLKSSDIVVVPNLSGLYIEEAITELQHKELIPYVELKFSSTSLDKGKVIDQKPKAGTV
HHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEE
LRLDSKVKIFISKGAVINKVDNFIGKNIDDVLINLKANAINNNRMLYHLLRPVEIESTLP
EEECCEEEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEECCCEEECCCCC
KGTIIRQEPSPGTKIASLVDLQFLVSKGQEDSSVKYIKNYVGLYYKDVIISLLNDEIDFD
CCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VNVSKGNDFGSVIYQSLSPGNRIENLDKLIITINEPRVNSTSVFGIMTYKLDVYSSSVDI
EEECCCCCHHHHHHHHCCCCCHHCCCEEEEEEECCCCCCCCEEEEEEEEEEEEECCCEEE
MLKVKDSSGNSSLFYSFRSKGGLIKLPYEAVKGSTVELYIHDKLINQTLVN
EEEEECCCCCCEEEEEEECCCCEEECCHHHHCCCEEEEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]