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The map label for this gene is yebC [C]

Identifier: 203283954

GI number: 203283954

Start: 34831

End: 35562

Strand: Reverse

Name: yebC [C]

Synonym: BDU_30

Alternate gene names: 203283954

Gene position: 35562-34831 (Counterclockwise)

Preceding gene: 203283955

Following gene: 203283953

Centisome position: 3.82

GC content: 33.33

Gene sequence:

>732_bases
ATGTCTGGTCACAGTAAATGGTCAACTATAAAGAGAAAGAAAGGTACTCTTGATGCTAAGAGAAATAAGATTTTTACTAA
GTTAATTCGTGAAATAAGTATTGCCGCTAGAATGGGAGGAGGAGATATTGATTCTAATCCTCGCTTGAGACTTGCTGTTA
ATAAGGCTAGAGTTGCTAATATGCCTAAGGATAATATTGAAAAGGCAATAAAAAAGGGCATTGGTGATAATATGGGATCT
GAATATTTTGAACTTACTTATGAAGCCTATGCTCTTTATGGTGTGGCTTTAATAATTAAATGTTTGACGGATAATAAGAA
TAGGACAGCAAGTGAAGTGAGAAGTGTTCTCTCAAAAAGTGGGGGTTCTCTTGGAGCTCCAGGTTCTGTTTCTTATATGT
TTCATAAAAAGGGATTGATTTCTTACAATTTAGATAAATATCATGAGGATGAAATAATAGAGCTTGCATTGGAAGCAGGT
GCAGAAGATATTTATAGTGAAGGTTCTCAAGTAGAAGTAATAACGAGTGCTGATAATTTTGAATCCGTTTCATCTATTTT
GCGAACTAAGTTTGAAGAGGATATTGCAGAGGTTGCACTTGTTCCTGAGAGTAAAGTTGCTTTAGATAAAGAACAAATGG
ATAAAGTACTTGCTATTATTGAAAAATTGGAAGATTGTGATGATGTACAAGAAGTTTATCATAATTTAGAAATTGTTGAT
GATATTTGTTAG

Upstream 100 bases:

>100_bases
TACAGTTCTTATGTTGATGTTTAATACAATTAAAGCCTATTTAATTAGGCGTAAGAAGTTTGATCTTTTAGAAAAATTGA
TGAAATTGGTGGAGGTTTGA

Downstream 100 bases:

>100_bases
TATAGTGTTAAAGTTTTTTTATTTTGCTTTTATTTTTATAAATAAGATAAGCTTGAATTTTTATGAATTATAATTTAGTT
CTATGATTAATAAAATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSGHSKWSTIKRKKGTLDAKRNKIFTKLIREISIAARMGGGDIDSNPRLRLAVNKARVANMPKDNIEKAIKKGIGDNMGS
EYFELTYEAYALYGVALIIKCLTDNKNRTASEVRSVLSKSGGSLGAPGSVSYMFHKKGLISYNLDKYHEDEIIELALEAG
AEDIYSEGSQVEVITSADNFESVSSILRTKFEEDIAEVALVPESKVALDKEQMDKVLAIIEKLEDCDDVQEVYHNLEIVD
DIC

Sequences:

>Translated_243_residues
MSGHSKWSTIKRKKGTLDAKRNKIFTKLIREISIAARMGGGDIDSNPRLRLAVNKARVANMPKDNIEKAIKKGIGDNMGS
EYFELTYEAYALYGVALIIKCLTDNKNRTASEVRSVLSKSGGSLGAPGSVSYMFHKKGLISYNLDKYHEDEIIELALEAG
AEDIYSEGSQVEVITSADNFESVSSILRTKFEEDIAEVALVPESKVALDKEQMDKVLAIIEKLEDCDDVQEVYHNLEIVD
DIC
>Mature_242_residues
SGHSKWSTIKRKKGTLDAKRNKIFTKLIREISIAARMGGGDIDSNPRLRLAVNKARVANMPKDNIEKAIKKGIGDNMGSE
YFELTYEAYALYGVALIIKCLTDNKNRTASEVRSVLSKSGGSLGAPGSVSYMFHKKGLISYNLDKYHEDEIIELALEAGA
EDIYSEGSQVEVITSADNFESVSSILRTKFEEDIAEVALVPESKVALDKEQMDKVLAIIEKLEDCDDVQEVYHNLEIVDD
IC

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=28.7449392712551, Blast_Score=103, Evalue=2e-22,
Organism=Escherichia coli, GI1788171, Length=246, Percent_Identity=48.3739837398374, Blast_Score=237, Evalue=4e-64,
Organism=Escherichia coli, GI1788294, Length=236, Percent_Identity=35.1694915254237, Blast_Score=128, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=26.2295081967213, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=267, Percent_Identity=31.4606741573034, Blast_Score=102, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24583305, Length=257, Percent_Identity=27.2373540856031, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26944; Mature: 26813

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWSTIKRKKGTLDAKRNKIFTKLIREISIAARMGGGDIDSNPRLRLAVNKARVAN
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHCC
MPKDNIEKAIKKGIGDNMGSEYFELTYEAYALYGVALIIKCLTDNKNRTASEVRSVLSKS
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
GGSLGAPGSVSYMFHKKGLISYNLDKYHEDEIIELALEAGAEDIYSEGSQVEVITSADNF
CCCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECCCCH
ESVSSILRTKFEEDIAEVALVPESKVALDKEQMDKVLAIIEKLEDCDDVQEVYHNLEIVD
HHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
DIC
HCC
>Mature Secondary Structure 
SGHSKWSTIKRKKGTLDAKRNKIFTKLIREISIAARMGGGDIDSNPRLRLAVNKARVAN
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHCC
MPKDNIEKAIKKGIGDNMGSEYFELTYEAYALYGVALIIKCLTDNKNRTASEVRSVLSKS
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
GGSLGAPGSVSYMFHKKGLISYNLDKYHEDEIIELALEAGAEDIYSEGSQVEVITSADNF
CCCCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECCCCH
ESVSSILRTKFEEDIAEVALVPESKVALDKEQMDKVLAIIEKLEDCDDVQEVYHNLEIVD
HHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
DIC
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA