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The map label for this gene is RPL21A

Identifier: 20095096

GI number: 20095096

Start: 1663977

End: 1664285

Strand: Reverse

Name: RPL21A

Synonym: MK1660

Alternate gene names: 20095096

Gene position: 1664285-1663977 (Counterclockwise)

Preceding gene: 20095097

Following gene: 20095095

Centisome position: 98.19

GC content: 53.72

Gene sequence:

>309_bases
TTGGTGAGAAGATCCAAAGGTTTCCGGAGTCGTACACGGAAAAAACTCCGAAAGAAGCCTAGAGAGCGCGGTCTTTCCCC
GTTGGGTCCGATGACGCAGGAGTTCGAGGAGGGTCAGAAAGTACACATCGTAATCGATCCCAGTGTCCACAAAGGCATGC
CCCATCCCAGGTACCACGGGAGAACTGGAGAAGTCGTAGGACGCCAAGGCCGAGCTTACATCGTGAAGATCAGGGATGGA
GGGAAGGAGAAGAAACTGATAGTGTACCCCGAGCATTTGAAGCCACAGGAGCAGCCTGAACTCCAGTGA

Upstream 100 bases:

>100_bases
GAGATCGATATAGAGCCTGATCTCACCGTCGGTGTCAGCGCTCCTGTCGGAGAGCTGGCCGCGCTGGCCGTCGTATTGTA
CGAGTTGGGGGGAGCTTGAG

Downstream 100 bases:

>100_bases
TAGGGGTCCCCGGCCTTGCCCTCGATATCCCTTCAGGCCCGGGAACGGAGTCCGACTAACGTACACGAGGCTCGCAAAGT
GGTAGAGAAGGTCCTAAAGG

Product: 50S ribosomal protein L21e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MVRRSKGFRSRTRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVVGRQGRAYIVKIRDG
GKEKKLIVYPEHLKPQEQPELQ

Sequences:

>Translated_102_residues
MVRRSKGFRSRTRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVVGRQGRAYIVKIRDG
GKEKKLIVYPEHLKPQEQPELQ
>Mature_102_residues
MVRRSKGFRSRTRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVVGRQGRAYIVKIRDG
GKEKKLIVYPEHLKPQEQPELQ

Specific function: Unknown

COG id: COG2139

COG function: function code J; Ribosomal protein L21E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L21e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL21_METKA (Q8TUU3)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614943.1
- ProteinModelPortal:   Q8TUU3
- SMR:   Q8TUU3
- GeneID:   1478255
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1660
- NMPDR:   fig|190192.1.peg.1656
- HOGENOM:   HBG497499
- OMA:   RFHGKTG
- ProtClustDB:   PRK04306
- BioCyc:   MKAN190192:MK1660-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00369
- InterPro:   IPR001147
- InterPro:   IPR022856
- InterPro:   IPR018259
- InterPro:   IPR008991
- PANTHER:   PTHR20981

Pfam domain/function: PF01157 Ribosomal_L21e; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 11873; Mature: 11873

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: PS01171 RIBOSOMAL_L21E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRSKGFRSRTRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHG
CCCCCCCHHHHHHHHHHHCHHHCCCCCCCCCHHHHHCCCEEEEEECCHHHCCCCCCCCCC
RTGEVVGRQGRAYIVKIRDGGKEKKLIVYPEHLKPQEQPELQ
CCCCEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVRRSKGFRSRTRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHG
CCCCCCCHHHHHHHHHHHCHHHCCCCCCCCCHHHHHCCCEEEEEECCHHHCCCCCCCCCC
RTGEVVGRQGRAYIVKIRDGGKEKKLIVYPEHLKPQEQPELQ
CCCCEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014