Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20095076

Identifier: 20095076

GI number: 20095076

Start: 1640674

End: 1641513

Strand: Reverse

Name: 20095076

Synonym: MK1640

Alternate gene names: NA

Gene position: 1641513-1640674 (Counterclockwise)

Preceding gene: 20095078

Following gene: 20095074

Centisome position: 96.85

GC content: 59.76

Gene sequence:

>840_bases
GTGGCCTTGGAGAAGCTAGCGGATCTGCTGGACGTACGCAACGAAAACACCCGGCACTCATACCGCTTCGCTTTACGGAG
GCTGGATGAGTTCCTCCGGAGGATCCTGGAGGACGAGGAGCCGGAAGAGTGGCTCGAGAAGGCCCCAGACGAGGAGATTT
TAGAGGTAGCACGCGAACTCCGTAACTTGCTGGTGGAGTCAGTCCGTAACATGGAGTTGGACCATGAAATGGGTAGACTG
TGCTGGTACGCGCTCACTAAAGCCCTACGAGCCGTTGGTAGGGACCCACTGCTCGTCCTGACCGTGAAGGCGTACGGATC
GCCTGCATCGCCCGAGATGACCGAGCAGGACGCTCGTGAAATTTTAGAGCTGGTAGATTTGATCGAGGAGTGGGCAAAAG
AAAACAAGGACGCATCCTGGTGGGCGCCGTTCCGCATCATCGCCGAATCGGGAATCAGCGTGATGGACCTAGTGAGGATG
CGCTGGGCGGATGTGTGTCCCGGCGAGCCCTGGCTCGAAGAAACGCCGGACGAGCCCCGCCTGAGGGTCGAGAAACCGGA
GGAAACCATCGAGTTCCCCATTACCGAGCGAGGACTGGAAGCACTCCGAGAGCTGGCGGAATGGGCCGGTGTAGATCCGA
CAGAGGAACCCGAGCGTCCGATACTCATGAGCGAGGACGACGAGTACCACACGGACGCGCAGCGCATGGACTCCTGGAGG
GCGAGGCTGACGTACCGCTGGCGTGAAGCTCAGCGGAGTGTACTAGGGGAGTCCGAGTGGAGGATCAAGGATCTCACCAG
AGCCACGAGGATACTGCGGCTACCCGAGCTACGTCGGTAA

Upstream 100 bases:

>100_bases
TAGCACAACGGCTAATGTGCTGATGGCGTGACGGCGCCACGGCTGGGAGCCGGGGCCCATCCGGACGCCACGTAAAACTT
TCACGTAGGGGGAGCCCCCC

Downstream 100 bases:

>100_bases
CCTCGTTCGCTCAATCAATTCTTAAATCCCAAATCGTTATAATATTCGTAACGATTCTCAGAATTGGTGGGGCCGCCCGG
ATTTGAACCGGGGTCTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MALEKLADLLDVRNENTRHSYRFALRRLDEFLRRILEDEEPEEWLEKAPDEEILEVARELRNLLVESVRNMELDHEMGRL
CWYALTKALRAVGRDPLLVLTVKAYGSPASPEMTEQDAREILELVDLIEEWAKENKDASWWAPFRIIAESGISVMDLVRM
RWADVCPGEPWLEETPDEPRLRVEKPEETIEFPITERGLEALRELAEWAGVDPTEEPERPILMSEDDEYHTDAQRMDSWR
ARLTYRWREAQRSVLGESEWRIKDLTRATRILRLPELRR

Sequences:

>Translated_279_residues
MALEKLADLLDVRNENTRHSYRFALRRLDEFLRRILEDEEPEEWLEKAPDEEILEVARELRNLLVESVRNMELDHEMGRL
CWYALTKALRAVGRDPLLVLTVKAYGSPASPEMTEQDAREILELVDLIEEWAKENKDASWWAPFRIIAESGISVMDLVRM
RWADVCPGEPWLEETPDEPRLRVEKPEETIEFPITERGLEALRELAEWAGVDPTEEPERPILMSEDDEYHTDAQRMDSWR
ARLTYRWREAQRSVLGESEWRIKDLTRATRILRLPELRR
>Mature_278_residues
ALEKLADLLDVRNENTRHSYRFALRRLDEFLRRILEDEEPEEWLEKAPDEEILEVARELRNLLVESVRNMELDHEMGRLC
WYALTKALRAVGRDPLLVLTVKAYGSPASPEMTEQDAREILELVDLIEEWAKENKDASWWAPFRIIAESGISVMDLVRMR
WADVCPGEPWLEETPDEPRLRVEKPEETIEFPITERGLEALRELAEWAGVDPTEEPERPILMSEDDEYHTDAQRMDSWRA
RLTYRWREAQRSVLGESEWRIKDLTRATRILRLPELRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33062; Mature: 32931

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALEKLADLLDVRNENTRHSYRFALRRLDEFLRRILEDEEPEEWLEKAPDEEILEVAREL
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH
RNLLVESVRNMELDHEMGRLCWYALTKALRAVGRDPLLVLTVKAYGSPASPEMTEQDARE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH
ILELVDLIEEWAKENKDASWWAPFRIIAESGISVMDLVRMRWADVCPGEPWLEETPDEPR
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LRVEKPEETIEFPITERGLEALRELAEWAGVDPTEEPERPILMSEDDEYHTDAQRMDSWR
EECCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ARLTYRWREAQRSVLGESEWRIKDLTRATRILRLPELRR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ALEKLADLLDVRNENTRHSYRFALRRLDEFLRRILEDEEPEEWLEKAPDEEILEVAREL
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH
RNLLVESVRNMELDHEMGRLCWYALTKALRAVGRDPLLVLTVKAYGSPASPEMTEQDARE
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH
ILELVDLIEEWAKENKDASWWAPFRIIAESGISVMDLVRMRWADVCPGEPWLEETPDEPR
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LRVEKPEETIEFPITERGLEALRELAEWAGVDPTEEPERPILMSEDDEYHTDAQRMDSWR
EECCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ARLTYRWREAQRSVLGESEWRIKDLTRATRILRLPELRR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA