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The map label for this gene is ycbL [C]

Identifier: 20095070

GI number: 20095070

Start: 1634606

End: 1635241

Strand: Reverse

Name: ycbL [C]

Synonym: MK1634

Alternate gene names: 20095070

Gene position: 1635241-1634606 (Counterclockwise)

Preceding gene: 20095072

Following gene: 20095066

Centisome position: 96.48

GC content: 65.88

Gene sequence:

>636_bases
GTGAGGGTGTTCCGGGTCGGCGGTAAGGGGATTACACCCTCGCCGGACTGCAATTGCTACCTGCTGGCCGTGGGCGACGA
GGGGATCCTCATCGATCTCGGGGCCTCCGGGGAGGTCATCGACAGGTTGCCGGGGAACGTGGACGTCAGGTACGCTCTGC
TCACGCACAGTCACTTCGACCACGCGGCCGCGGGTCCCGATGCCCTGGAGGCCGGGCTCGAGGTAGGGGTGCACCGGGCG
GAGGCCGAGGTACTGCGGGAGGGCGACGACAGGCTGTCGGCGGCGTACCTCTTCGGACGCCCGATGCCCGCGTACGAGCC
TTCTTTCACGTTCCGGGATGGGGAGACGTTCGACGTGGGTGGTGAGGAGGTGGAGGTCCTGTACACCCCTGGACACTCTC
CCGGGAGCTGCTGTTTCCTGCTCGGTGACTTGGCGTTCACCGGGGATACCGTGTTCGGGTTCGGTCCGGGTAGGTGGGAC
CTTCCGGGCGGGGACAGGAAGAAGCTGTGTGAATCCCTGGAGCGGCTGCTGAGTACGGGTGTTCGGTCGATCTTCCCCGG
ACACGGGTACGAGGTGATCGGGGAGGCCGTCCCGGCGATAGAGGCGGCGTTGCGTGAGGCCGAAAAAGATATTTAG

Upstream 100 bases:

>100_bases
ACACCGTCCTGCGGAGGGCCTCCCGTACGGCCTTCAGCGCGAGCTCCTCGGGTCGCATGGGGGAGTCGCCCCTTTGTTGG
AGGTGTACTCCGACGGTGAG

Downstream 100 bases:

>100_bases
TAGGGAGATGGGGAGCCGGGTGGCGGCGGAGCGAGCGGCCGCAGTCTAGTCTGGTAGGACGCGGGCCTGCCGAGCCCGTG
GCCCGGGTTCAAATCCCGGC

Product: Zn-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MRVFRVGGKGITPSPDCNCYLLAVGDEGILIDLGASGEVIDRLPGNVDVRYALLTHSHFDHAAAGPDALEAGLEVGVHRA
EAEVLREGDDRLSAAYLFGRPMPAYEPSFTFRDGETFDVGGEEVEVLYTPGHSPGSCCFLLGDLAFTGDTVFGFGPGRWD
LPGGDRKKLCESLERLLSTGVRSIFPGHGYEVIGEAVPAIEAALREAEKDI

Sequences:

>Translated_211_residues
MRVFRVGGKGITPSPDCNCYLLAVGDEGILIDLGASGEVIDRLPGNVDVRYALLTHSHFDHAAAGPDALEAGLEVGVHRA
EAEVLREGDDRLSAAYLFGRPMPAYEPSFTFRDGETFDVGGEEVEVLYTPGHSPGSCCFLLGDLAFTGDTVFGFGPGRWD
LPGGDRKKLCESLERLLSTGVRSIFPGHGYEVIGEAVPAIEAALREAEKDI
>Mature_211_residues
MRVFRVGGKGITPSPDCNCYLLAVGDEGILIDLGASGEVIDRLPGNVDVRYALLTHSHFDHAAAGPDALEAGLEVGVHRA
EAEVLREGDDRLSAAYLFGRPMPAYEPSFTFRDGETFDVGGEEVEVLYTPGHSPGSCCFLLGDLAFTGDTVFGFGPGRWD
LPGGDRKKLCESLERLLSTGVRSIFPGHGYEVIGEAVPAIEAALREAEKDI

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI42822880, Length=221, Percent_Identity=29.4117647058824, Blast_Score=71, Evalue=8e-13,
Organism=Escherichia coli, GI1787158, Length=181, Percent_Identity=32.0441988950276, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 22554; Mature: 22554

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFRVGGKGITPSPDCNCYLLAVGDEGILIDLGASGEVIDRLPGNVDVRYALLTHSHFD
CEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHCCCCCEEEEEEEECCCCC
HAAAGPDALEAGLEVGVHRAEAEVLREGDDRLSAAYLFGRPMPAYEPSFTFRDGETFDVG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCEEECCCCEEECC
GEEVEVLYTPGHSPGSCCFLLGDLAFTGDTVFGFGPGRWDLPGGDRKKLCESLERLLSTG
CCEEEEEECCCCCCCCEEEEEECHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
VRSIFPGHGYEVIGEAVPAIEAALREAEKDI
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVFRVGGKGITPSPDCNCYLLAVGDEGILIDLGASGEVIDRLPGNVDVRYALLTHSHFD
CEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHCCCCCEEEEEEEECCCCC
HAAAGPDALEAGLEVGVHRAEAEVLREGDDRLSAAYLFGRPMPAYEPSFTFRDGETFDVG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCCEEECCCCEEECC
GEEVEVLYTPGHSPGSCCFLLGDLAFTGDTVFGFGPGRWDLPGGDRKKLCESLERLLSTG
CCEEEEEECCCCCCCCEEEEEECHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
VRSIFPGHGYEVIGEAVPAIEAALREAEKDI
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]