| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095061
Identifier: 20095061
GI number: 20095061
Start: 1626880
End: 1627365
Strand: Reverse
Name: 20095061
Synonym: MK1625
Alternate gene names: NA
Gene position: 1627365-1626880 (Counterclockwise)
Preceding gene: 20095062
Following gene: 20095058
Centisome position: 96.01
GC content: 63.37
Gene sequence:
>486_bases GTGATTCAGGGGTGGTCGGCCTTACGGCGCGGGAGACTCAACTTGGAGGCTGTGATCCGCGCCCTGGCCGCCGAGCGGAT GGCATCCGAGCTGCCTCTCGTCGAGGTGGCGGCGCGGCTCGACGTTGACCCATCCACGGTCTCACATTACCTAAGCGGTG ATTACCCGTCGGAAGAGACGCGTGACAAGGTACGTCGTGTGGTCGAAGAGACACCGCCCTTCGGACTTTGGCCCCAGCTC CGTGAAGCGTTGGGCGTGGACGTCGCTGCTGAGGCGTTGAAGTGGGTGATGGGTCCTCGGACCGAGGCGGAACCGGATGT CGACGACGAGAGGTGCCTAGCGTGCGGCCGGTGCTCCGAAATCTGTCCATCACCGGACGGTGAGTGCTTAGGGTGCGGAG AGTGCGTGCGGGCGTGTCCTTCGGGAGCTAGGTCACTCAGCGTCAGGTACCGCGGACTGGTCTATCGAGTCTTTTCACCC AAGTAA
Upstream 100 bases:
>100_bases GGGAGTTACTGGAGAAGGGAGCACGTCGCGTTGGATCACCCGGAATTGTACGGGTCGTACGGCTCGCACGATCGCTGGAC ATTCTAGGACGCATTAAACC
Downstream 100 bases:
>100_bases CGCTCGGCGAGCTCGATCGCACGGTCGGCGGCTTTCGGTACCGCCTTACGGACGGGATCGGAGAGACCAGGTTGGACCTC GGGAATCGGTAGCTCTTTCA
Product: fused ferredoxin domain/DNA-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MIQGWSALRRGRLNLEAVIRALAAERMASELPLVEVAARLDVDPSTVSHYLSGDYPSEETRDKVRRVVEETPPFGLWPQL REALGVDVAAEALKWVMGPRTEAEPDVDDERCLACGRCSEICPSPDGECLGCGECVRACPSGARSLSVRYRGLVYRVFSP K
Sequences:
>Translated_161_residues MIQGWSALRRGRLNLEAVIRALAAERMASELPLVEVAARLDVDPSTVSHYLSGDYPSEETRDKVRRVVEETPPFGLWPQL REALGVDVAAEALKWVMGPRTEAEPDVDDERCLACGRCSEICPSPDGECLGCGECVRACPSGARSLSVRYRGLVYRVFSP K >Mature_161_residues MIQGWSALRRGRLNLEAVIRALAAERMASELPLVEVAARLDVDPSTVSHYLSGDYPSEETRDKVRRVVEETPPFGLWPQL REALGVDVAAEALKWVMGPRTEAEPDVDDERCLACGRCSEICPSPDGECLGCGECVRACPSGARSLSVRYRGLVYRVFSP K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17720; Mature: 17720
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQGWSALRRGRLNLEAVIRALAAERMASELPLVEVAARLDVDPSTVSHYLSGDYPSEET CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCHHH RDKVRRVVEETPPFGLWPQLREALGVDVAAEALKWVMGPRTEAEPDVDDERCLACGRCSE HHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHH ICPSPDGECLGCGECVRACPSGARSLSVRYRGLVYRVFSPK CCCCCCCCEECHHHHHHHCCCCHHHHHHHHHEEEEEECCCC >Mature Secondary Structure MIQGWSALRRGRLNLEAVIRALAAERMASELPLVEVAARLDVDPSTVSHYLSGDYPSEET CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCHHH RDKVRRVVEETPPFGLWPQLREALGVDVAAEALKWVMGPRTEAEPDVDDERCLACGRCSE HHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHH ICPSPDGECLGCGECVRACPSGARSLSVRYRGLVYRVFSPK CCCCCCCCEECHHHHHHHCCCCHHHHHHHHHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA