| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095008
Identifier: 20095008
GI number: 20095008
Start: 1584936
End: 1585493
Strand: Direct
Name: 20095008
Synonym: MK1572
Alternate gene names: NA
Gene position: 1584936-1585493 (Clockwise)
Preceding gene: 20095006
Following gene: 20095009
Centisome position: 93.51
GC content: 33.87
Gene sequence:
>558_bases ATGAATGTATCAACCACCCTAATATTTACAACAATATCACCAGGTACATCACCAGTAACCTTCATCAGAACTTTACCATT TACTAGTAACTTATTATTCCTAACTTCAATATCGATAGTATCGTTATTCGAAAATTTAAATGCCAAGGTCTTTGTCGTGA CTTTATCCCCTTCAGGAAGTTTAATATTATCAACAAGAACCTTATATTTTAAATGTTTTGAACTTATACTAGCCAATGGA ACGTTAGTGCCCAAACCTTTATTAACGATTTCCTCAATTATAAAATGTTCAGATTTTATCTTATTTATTTTCAAATCGAA CCCAATCTCAATACTTACCTCGTACAGTCCTTCAGAGGCGGTTAAGGCAATTTTATCGTTCCTTTTAAACTCGTATGTTT CAGTAGTCGTCTCTGATTTAGCATTTATTAACACTTTGTTTTCAGTTGGAACAATCCTTATCGTATCCCCGATGTTTAAC TTACTTAAGATCAAACGATCGTTCAGCTTTAGACTCCGATTGGCAACCTTAATTCGTACGATGTTCGCAGAAGTGTGA
Upstream 100 bases:
>100_bases ATCCCCATCATCACTAATTACTACCACACTACCGAAAGTTTCAATATTACGTGTTTTCAAACACCCGTCGTAATAACACC ATAACTTAATTTTCCCATGA
Downstream 100 bases:
>100_bases ACTTCTAAGGGATCGTCGTATGATATATTTGTAATCATATGTTTTGATGGATCCCATTCTATTTAGACCTTACAGGAGCG AGCTTGTGAACCTATGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MNVSTTLIFTTISPGTSPVTFIRTLPFTSNLLFLTSISIVSLFENLNAKVFVVTLSPSGSLILSTRTLYFKCFELILANG TLVPKPLLTISSIIKCSDFILFIFKSNPISILTSYSPSEAVKAILSFLLNSYVSVVVSDLAFINTLFSVGTILIVSPMFN LLKIKRSFSFRLRLATLIRTMFAEV
Sequences:
>Translated_185_residues MNVSTTLIFTTISPGTSPVTFIRTLPFTSNLLFLTSISIVSLFENLNAKVFVVTLSPSGSLILSTRTLYFKCFELILANG TLVPKPLLTISSIIKCSDFILFIFKSNPISILTSYSPSEAVKAILSFLLNSYVSVVVSDLAFINTLFSVGTILIVSPMFN LLKIKRSFSFRLRLATLIRTMFAEV >Mature_185_residues MNVSTTLIFTTISPGTSPVTFIRTLPFTSNLLFLTSISIVSLFENLNAKVFVVTLSPSGSLILSTRTLYFKCFELILANG TLVPKPLLTISSIIKCSDFILFIFKSNPISILTSYSPSEAVKAILSFLLNSYVSVVVSDLAFINTLFSVGTILIVSPMFN LLKIKRSFSFRLRLATLIRTMFAEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20397; Mature: 20397
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSTTLIFTTISPGTSPVTFIRTLPFTSNLLFLTSISIVSLFENLNAKVFVVTLSPSGS CCCEEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC LILSTRTLYFKCFELILANGTLVPKPLLTISSIIKCSDFILFIFKSNPISILTSYSPSEA EEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCEEEEECCCHHHH VKAILSFLLNSYVSVVVSDLAFINTLFSVGTILIVSPMFNLLKIKRSFSFRLRLATLIRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFAEV HHHCC >Mature Secondary Structure MNVSTTLIFTTISPGTSPVTFIRTLPFTSNLLFLTSISIVSLFENLNAKVFVVTLSPSGS CCCEEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC LILSTRTLYFKCFELILANGTLVPKPLLTISSIIKCSDFILFIFKSNPISILTSYSPSEA EEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCCCEEEEECCCHHHH VKAILSFLLNSYVSVVVSDLAFINTLFSVGTILIVSPMFNLLKIKRSFSFRLRLATLIRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFAEV HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA