| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is TrxB
Identifier: 20094997
GI number: 20094997
Start: 1574882
End: 1575400
Strand: Direct
Name: TrxB
Synonym: MK1561
Alternate gene names: NA
Gene position: 1574882-1575400 (Clockwise)
Preceding gene: 20094996
Following gene: 20094999
Centisome position: 92.92
GC content: 58.77
Gene sequence:
>899_bases ATGGCGAAGCCGTATGACGTCATCGTAATTGGGGCCGGACCCGCCGGGCTCTCCGCCGCGATTCATGCCGCTAGGGCCGG GGCCGAGGTCCCCGTCGTCGCACAGGAGCTCGGTGGGCAGCTCACCACGGCGCCCGAGGTCGGGAACTATCCCGGTTTCC CACCCGCACCGGGATACGAGCTCGTCGATCGAATGGTGGAGCACGCTGAAACGGTCGGAGTAGAGCTGAACGTTAAGTAC TCTAACAGAGTTGAAGGGATCGAGCTGACGGACGGGACCTTCCGTGTCCTGGATGAGGAGTGCAGGGCGGTGGTGATCGC CACGGGCGCCAGGCCGAAGCGGTTGGGGGTTCCTGGGGAGCGAGAGCTCGAAGGCCGGGGGTCAGCTACTGTGCGATCTG CGACGGTCCCGCCTTTCAAAACCGAATCGTCGCGATCGTTGGGAGCGGTACCCACGCTGCGAACACGGCTCTCTTCCTCT CGGAGATAGCCGAGCGCGTTTATGTGATAACTCCGGACGGTAAGCTCGAGTCCCCAGATAGGGCCTTAATTGAACGCGTG CTATCATGCCGCAATGTGGAGGTCGTCCATGACGAAGTTCGGCGGATCGTCGGGGATGAGCGCGTCGAGGGCGTCGAGCT CTCCGACGGGGACATCCTGCCATGCGAGGGCGTCTTCATAGCGGCTGGTAAAGTGCCTAACTCGGAACCGTTTCGGGATC TCGTGGAAACCGACGATCGCGGTTACATAGTCGTGGACAGTGAGATGCGCACATCCTTGGAGGGAGTTTACTCCGCCGGA GACGTCACGACGATCCCGCACCGAAACGTGCCTTCTGCCGTTTATCAGGGCAGTGTGGCTGGAATCAACGCCGCCGAGTA CGCGTTGAAGTCTCGATGA
Upstream 100 bases:
>100_bases AACCCCCGGTCGGCGTTATCCTGGCGATGGCCGAGGATTTCTGCGATAAGCTGAGGAGGAGTGAGTGACCTCCTTCCCGT CCTCAAGGGTGAGGCTTCCG
Downstream 100 bases:
>100_bases GCTGCCACTCCGCGTACTCCGGGACGTCGAACTTCTTACGCTTTAACTCCACGTACACTACATCCGGCCTGGTCTTCACG GTTACGAACGCCCTGAGTAA
Product: thioredoxin reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>299_residues MAKPYDVIVIGAGPAGLSAAIHAARAGAEVPVVAQELGGQLTTAPEVGNYPGFPPAPGYELVDRMVEHAETVGVELNVKY SNRVEGIELTDGTFRVLDEECRAVVIATGARPKRLGVPGERELEGRGVSYCAICDGPAFQNRIVAIVGSGTHAANTALFL SEIAERVYVITPDGKLESPDRALIERVLSCRNVEVVHDEVRRIVGDERVEGVELSDGDILPCEGVFIAAGKVPNSEPFRD LVETDDRGYIVVDSEMRTSLEGVYSAGDVTTIPHRNVPSAVYQGSVAGINAAEYALKSR
Sequences:
>Translated_173_residues SSRLQRVLGGVDSSHTALINGRRHVSVRDRRDVSGGVNSLQGCAHLTVHDYVTAIVGFHEIPKRFRVRHFTSRYEDALAW QDVPVGELDALDALIPDDPPNFVMDDLHIAA**HAFN*GPIWGLELTVRSYHINALGYLREEESRVRSVGTAPNDRDDSV LKGGTVADRTVAD >Mature_173_residues SSRLQRVLGGVDSSHTALINGRRHVSVRDRRDVSGGVNSLQGCAHLTVHDYVTAIVGFHEIPKRFRVRHFTSRYEDALAW QDVPVGELDALDALIPDDPPNFVMDDLHIAA**HAFN*GPIWGLELTVRSYHINALGYLREEESRVRSVGTAPNDRDDSV LKGGTVADRTVAD
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18735; Mature: 18735
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure SSRLQRVLGGVDSSHTALINGRRHVSVRDRRDVSGGVNSLQGCAHLTVHDYVTAIVGFHE CCHHHHHHCCCCCCCEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IPKRFRVRHFTSRYEDALAWQDVPVGELDALDALIPDDPPNFVMDDLHIAAHAFNGPIWG HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEE LELTVRSYHINALGYLREEESRVRSVGTAPNDRDDSVLKGGTVADRTVAD EEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA