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The map label for this gene is yfdV [C]

Identifier: 20094996

GI number: 20094996

Start: 1573487

End: 1574383

Strand: Direct

Name: yfdV [C]

Synonym: MK1560

Alternate gene names: 20094996

Gene position: 1573487-1574383 (Clockwise)

Preceding gene: 20094990

Following gene: 20094997

Centisome position: 92.83

GC content: 60.31

Gene sequence:

>897_bases
GTGGGAGGGCTGGAAGCGTTCCTTGAGATACTCGGACTAGTGTTCGTGGGATACACGTTACGTAAGGTTGGGGTCTTTTC
CAAAGATACGCCGTCCCATCTCAACGCGTACGTGGTTTATCTGGCCATGCCGGCGTTAGTGTTCACCGCGATGTTGAGGG
CCCCGATTCAGGGACTACTCCAGCATCTCAAGCTCGTGGTCATCTCGATGTTGCTGTCGGTCATGTGTGCCCTCATCGGT
TTCGCGGTCGCTCGTAAGATGGCCCGCGATCGGCGCGATGCGATGGCTGTTGCCCTAGCCTCGGGGCTGGGGAACACCGG
GTTTTTGGGGTACCCAGTATGCCTCTCCACGTTCGGGGAACCGGGTCTCGAAGCAGCGGTTTTCTACGACTTCGGGACGA
CCCTGTCGGTGATAGCGGCTTACCTGATGCTGTCCTCCCGCCGCGAAAACCCATTGAAGATGAGCCTACGTTTTCCGCCC
GCCCATGCCGCCGTCGCGGGAATGTGTTGGGCGGCTCTCGGGCTTCACCTACCCGATACCATCCGCTCGACTCTGCAGCT
GCTGGGACGCTCCGTAGTGCCGGTCATCATGGTCTCACTCGGAGCCTCACTTCGGTGGGATCTCCCCAAATCCGTCATCA
GTGTGATACCGACCGTCTGGGTCGTTAAATTGTGTGCATCGCCGGTAGTGGCGGCGACCATCGCTCCGTCGGGGTTGGAC
GGCAAAGTGGCCGTTCTGGAGGCCGCAATGCCTCCAGCCCTGATGAACTTGGTATTGGCGGAGCTCTTGGGACTGAGACC
GCACGTGACCGCCGCCTTGGTGTTCTCGACCACCGTGATATCGCTGGCGACGGTTCCGACGGTGATCTACCTGGTATCGG
GTGGGGGCGGAGCGTGA

Upstream 100 bases:

>100_bases
AGAATTGAGAGGGTATCTCCGAGTGTCCAGCGACTTCGACGGCCTCTCGGAACCGCAGGTACAACTCGTCCAGAACATCC
AAGAGGGGGGTCCCCCGCAC

Downstream 100 bases:

>100_bases
AAGTCCCAACCGTATGTTATCGGGACGTGCAGCGCTGCGAAACCTCCGATTGGTCCTCCTATGAGGAGTATCTCGACGAC
GTCCTACGGGAAATAGCCTC

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MGGLEAFLEILGLVFVGYTLRKVGVFSKDTPSHLNAYVVYLAMPALVFTAMLRAPIQGLLQHLKLVVISMLLSVMCALIG
FAVARKMARDRRDAMAVALASGLGNTGFLGYPVCLSTFGEPGLEAAVFYDFGTTLSVIAAYLMLSSRRENPLKMSLRFPP
AHAAVAGMCWAALGLHLPDTIRSTLQLLGRSVVPVIMVSLGASLRWDLPKSVISVIPTVWVVKLCASPVVAATIAPSGLD
GKVAVLEAAMPPALMNLVLAELLGLRPHVTAALVFSTTVISLATVPTVIYLVSGGGGA

Sequences:

>Translated_298_residues
MGGLEAFLEILGLVFVGYTLRKVGVFSKDTPSHLNAYVVYLAMPALVFTAMLRAPIQGLLQHLKLVVISMLLSVMCALIG
FAVARKMARDRRDAMAVALASGLGNTGFLGYPVCLSTFGEPGLEAAVFYDFGTTLSVIAAYLMLSSRRENPLKMSLRFPP
AHAAVAGMCWAALGLHLPDTIRSTLQLLGRSVVPVIMVSLGASLRWDLPKSVISVIPTVWVVKLCASPVVAATIAPSGLD
GKVAVLEAAMPPALMNLVLAELLGLRPHVTAALVFSTTVISLATVPTVIYLVSGGGGA
>Mature_297_residues
GGLEAFLEILGLVFVGYTLRKVGVFSKDTPSHLNAYVVYLAMPALVFTAMLRAPIQGLLQHLKLVVISMLLSVMCALIGF
AVARKMARDRRDAMAVALASGLGNTGFLGYPVCLSTFGEPGLEAAVFYDFGTTLSVIAAYLMLSSRRENPLKMSLRFPPA
HAAVAGMCWAALGLHLPDTIRSTLQLLGRSVVPVIMVSLGASLRWDLPKSVISVIPTVWVVKLCASPVVAATIAPSGLDG
KVAVLEAAMPPALMNLVLAELLGLRPHVTAALVFSTTVISLATVPTVIYLVSGGGGA

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 31315; Mature: 31184

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLEAFLEILGLVFVGYTLRKVGVFSKDTPSHLNAYVVYLAMPALVFTAMLRAPIQGLL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHLKLVVISMLLSVMCALIGFAVARKMARDRRDAMAVALASGLGNTGFLGYPVCLSTFGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
PGLEAAVFYDFGTTLSVIAAYLMLSSRRENPLKMSLRFPPAHAAVAGMCWAALGLHLPDT
CCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHH
IRSTLQLLGRSVVPVIMVSLGASLRWDLPKSVISVIPTVWVVKLCASPVVAATIAPSGLD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
GKVAVLEAAMPPALMNLVLAELLGLRPHVTAALVFSTTVISLATVPTVIYLVSGGGGA
CCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC
>Mature Secondary Structure 
GGLEAFLEILGLVFVGYTLRKVGVFSKDTPSHLNAYVVYLAMPALVFTAMLRAPIQGLL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHLKLVVISMLLSVMCALIGFAVARKMARDRRDAMAVALASGLGNTGFLGYPVCLSTFGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
PGLEAAVFYDFGTTLSVIAAYLMLSSRRENPLKMSLRFPPAHAAVAGMCWAALGLHLPDT
CCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHH
IRSTLQLLGRSVVPVIMVSLGASLRWDLPKSVISVIPTVWVVKLCASPVVAATIAPSGLD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
GKVAVLEAAMPPALMNLVLAELLGLRPHVTAALVFSTTVISLATVPTVIYLVSGGGGA
CCHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]