Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094989

Identifier: 20094989

GI number: 20094989

Start: 1568769

End: 1569284

Strand: Direct

Name: 20094989

Synonym: MK1553

Alternate gene names: NA

Gene position: 1568769-1569284 (Clockwise)

Preceding gene: 20094985

Following gene: 20094990

Centisome position: 92.55

GC content: 59.3

Gene sequence:

>516_bases
ATGAAACGGTTCGAGTTAGACGTGGTGTTGCCGGATAAGCCCGGACAGCTCGTGAAAGTCCTCGAACCGTTGTCGAAAAT
CGGCGGTAACGTGATCAGTATATCCCATTCGCGAGATGGTGACCGCGCCCGGGTGCACATAGTGTTCGAGGCCACGGAGG
ATGTCGCCCGTGAGTACTCGCGGCGCATCAGTGAGTTGGAGGGCGTCAAGATCCTGCGGTTCGGTAGGGGGCCGGGGCAC
GAGACGGACGTCGTACTGATAGGACATATCGTAGACACGGATATTAAGGACACGATCGACCGGGTGAACGCTATACAGGG
CGCCCGCGTCGTGGACGTCGACTTGGAGATGCCGGATCCGGAGCGGGAGTCGTCCGCGGGATTCACGCTCATCTACGAAG
ACGAGGAGGCGCTGAGGAAAGCCGTCCAGACCATCGAGGAGATCGCTGAAGAGAAGGATCTTGTGGCCATCTTCCCGGTG
GAGGTGATACAGTGCGTCAGGCGCGCCTCTTCGTGA

Upstream 100 bases:

>100_bases
ACTCCTGTACACTGATGGCATGTGCCGCTCCTCCCAGCACCATGATAAAGGCCAGGATGGAGAAGGGCCGAAGCATGCGG
ACCACCCCGGGGGATTCGGA

Downstream 100 bases:

>100_bases
TCGGCCTCGGGGCCGTTGGGCTGGGACTGATGCGACTTCTGGCCAAGAAGCGGGACGCGTACGCCCGGGAGTTCGGCATC
GACGTTCGCGTGGTAGGAGT

Product: homoserine dehydrogenase regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKRFELDVVLPDKPGQLVKVLEPLSKIGGNVISISHSRDGDRARVHIVFEATEDVAREYSRRISELEGVKILRFGRGPGH
ETDVVLIGHIVDTDIKDTIDRVNAIQGARVVDVDLEMPDPERESSAGFTLIYEDEEALRKAVQTIEEIAEEKDLVAIFPV
EVIQCVRRASS

Sequences:

>Translated_171_residues
MKRFELDVVLPDKPGQLVKVLEPLSKIGGNVISISHSRDGDRARVHIVFEATEDVAREYSRRISELEGVKILRFGRGPGH
ETDVVLIGHIVDTDIKDTIDRVNAIQGARVVDVDLEMPDPERESSAGFTLIYEDEEALRKAVQTIEEIAEEKDLVAIFPV
EVIQCVRRASS
>Mature_171_residues
MKRFELDVVLPDKPGQLVKVLEPLSKIGGNVISISHSRDGDRARVHIVFEATEDVAREYSRRISELEGVKILRFGRGPGH
ETDVVLIGHIVDTDIKDTIDRVNAIQGARVVDVDLEMPDPERESSAGFTLIYEDEEALRKAVQTIEEIAEEKDLVAIFPV
EVIQCVRRASS

Specific function: Unknown

COG id: COG2061

COG function: function code E; ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912 [H]

Pfam domain/function: PF01842 ACT [H]

EC number: NA

Molecular weight: Translated: 19100; Mature: 19100

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFELDVVLPDKPGQLVKVLEPLSKIGGNVISISHSRDGDRARVHIVFEATEDVAREYS
CCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEECHHHHHHHHH
RRISELEGVKILRFGRGPGHETDVVLIGHIVDTDIKDTIDRVNAIQGARVVDVDLEMPDP
HHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCC
ERESSAGFTLIYEDEEALRKAVQTIEEIAEEKDLVAIFPVEVIQCVRRASS
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCC
>Mature Secondary Structure
MKRFELDVVLPDKPGQLVKVLEPLSKIGGNVISISHSRDGDRARVHIVFEATEDVAREYS
CCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEEECHHHHHHHHH
RRISELEGVKILRFGRGPGHETDVVLIGHIVDTDIKDTIDRVNAIQGARVVDVDLEMPDP
HHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCC
ERESSAGFTLIYEDEEALRKAVQTIEEIAEEKDLVAIFPVEVIQCVRRASS
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]