Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094942

Identifier: 20094942

GI number: 20094942

Start: 1521830

End: 1522651

Strand: Reverse

Name: 20094942

Synonym: MK1506

Alternate gene names: NA

Gene position: 1522651-1521830 (Counterclockwise)

Preceding gene: 20094945

Following gene: 20094941

Centisome position: 89.83

GC content: 59.49

Gene sequence:

>822_bases
TTGAAAGCCGCGGTGATTAACCGGAGCAAGGGTACCGTACTGGCTCACAGTGCCGAGATCGCGGAGTCGTTCCTCGCGAG
GCTTCGGGGGTTGATGTTCCGTCGAAGGTTGGAGGAGGGAGAGGGGCTGATCCTGAAGCCCCCTTACCGCGGACGCAGAC
GCTGCGCGATCCACACCTTCTTCATGCGCTTCCCGATCGACGTGGTGTTCCTGGCGGACGGGGAAGTGGTGGACGTGGTC
GAGCGCCTTAAGCCATGGCGAGTGTACGTACCAGAAGAACCTCCTGAGGAGATCGTGGAGCTCCCGGCTGGCATCGTCAG
CGCGACCGATACTGAGGTCGGCGACTCCGTTGAAGTTGTGGCGGGGGACCTCGAATCGGAGCTGGCCGTCAGGATCCTCA
ACCGGAAGCTGGTCACGAGAAAGCTCGCCCAGGTGATCATGCGGGCGGTAGCTAAATCCGGGCTACAGGGCGAGGTGTTC
TACAACAAGGACACTGGTTGCATCCACATCTCGGGGGAGGACAAGTACATCGTCGCGGACACCATTAAAGAGACGTTTGG
GGACAGCGTCGAGATCGTCGAGGGGCGGGCGAAGATACTCTCCGACGATCATTCTCTCGTCGTGATCGTAAAGGATGCGC
ATTCGGTCCTCGAGAAGATCGGTATCTCCCGCCCCGGTGGAGAGCTCATGTACCGAAAGGAACCCAAACCGGTGCGGTGG
GGAAAGCAGCGTGAAAAAGGAGCTGATGACGGTAGTGAACAGGCTGAGGAAGGAGATAGGAACGAAGGGGAAGGGAGAAC
CCGACATCGTGGACGTACGTGA

Upstream 100 bases:

>100_bases
AGGATCGAAGTCCACGACTACCGCCGACGGTTGTAAGCATCGGAGGGCTCGACGGAACGTCTCGACGAAGTTCAAAGTCG
CACCCCCCGGGGTGCGTTAA

Downstream 100 bases:

>100_bases
GGAGGACGGCACGCTAGTGATCGTAGGTAGGGATCGTTCCGACATGTCTTACTTCATCGGTCCGGGTGGATACGTCGCCG
GCAGACTTAAAGAGGAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKAAVINRSKGTVLAHSAEIAESFLARLRGLMFRRRLEEGEGLILKPPYRGRRRCAIHTFFMRFPIDVVFLADGEVVDVV
ERLKPWRVYVPEEPPEEIVELPAGIVSATDTEVGDSVEVVAGDLESELAVRILNRKLVTRKLAQVIMRAVAKSGLQGEVF
YNKDTGCIHISGEDKYIVADTIKETFGDSVEIVEGRAKILSDDHSLVVIVKDAHSVLEKIGISRPGGELMYRKEPKPVRW
GKQREKGADDGSEQAEEGDRNEGEGRTRHRGRT

Sequences:

>Translated_273_residues
MKAAVINRSKGTVLAHSAEIAESFLARLRGLMFRRRLEEGEGLILKPPYRGRRRCAIHTFFMRFPIDVVFLADGEVVDVV
ERLKPWRVYVPEEPPEEIVELPAGIVSATDTEVGDSVEVVAGDLESELAVRILNRKLVTRKLAQVIMRAVAKSGLQGEVF
YNKDTGCIHISGEDKYIVADTIKETFGDSVEIVEGRAKILSDDHSLVVIVKDAHSVLEKIGISRPGGELMYRKEPKPVRW
GKQREKGADDGSEQAEEGDRNEGEGRTRHRGRT
>Mature_273_residues
MKAAVINRSKGTVLAHSAEIAESFLARLRGLMFRRRLEEGEGLILKPPYRGRRRCAIHTFFMRFPIDVVFLADGEVVDVV
ERLKPWRVYVPEEPPEEIVELPAGIVSATDTEVGDSVEVVAGDLESELAVRILNRKLVTRKLAQVIMRAVAKSGLQGEVF
YNKDTGCIHISGEDKYIVADTIKETFGDSVEIVEGRAKILSDDHSLVVIVKDAHSVLEKIGISRPGGELMYRKEPKPVRW
GKQREKGADDGSEQAEEGDRNEGEGRTRHRGRT

Specific function: Unknown

COG id: COG1430

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0127 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003795
- InterPro:   IPR022906 [H]

Pfam domain/function: PF02643 DUF192 [H]

EC number: NA

Molecular weight: Translated: 30470; Mature: 30470

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAVINRSKGTVLAHSAEIAESFLARLRGLMFRRRLEEGEGLILKPPYRGRRRCAIHTF
CCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHH
FMRFPIDVVFLADGEVVDVVERLKPWRVYVPEEPPEEIVELPAGIVSATDTEVGDSVEVV
HHHCCEEEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCEECCCCCCCCCCEEE
AGDLESELAVRILNRKLVTRKLAQVIMRAVAKSGLQGEVFYNKDTGCIHISGEDKYIVAD
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEEHH
TIKETFGDSVEIVEGRAKILSDDHSLVVIVKDAHSVLEKIGISRPGGELMYRKEPKPVRW
HHHHHHCCCEEEECCHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEECCCCCCCC
GKQREKGADDGSEQAEEGDRNEGEGRTRHRGRT
CCHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKAAVINRSKGTVLAHSAEIAESFLARLRGLMFRRRLEEGEGLILKPPYRGRRRCAIHTF
CCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHH
FMRFPIDVVFLADGEVVDVVERLKPWRVYVPEEPPEEIVELPAGIVSATDTEVGDSVEVV
HHHCCEEEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCEECCCCCCCCCCEEE
AGDLESELAVRILNRKLVTRKLAQVIMRAVAKSGLQGEVFYNKDTGCIHISGEDKYIVAD
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEEHH
TIKETFGDSVEIVEGRAKILSDDHSLVVIVKDAHSVLEKIGISRPGGELMYRKEPKPVRW
HHHHHHCCCEEEECCHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEECCCCCCCC
GKQREKGADDGSEQAEEGDRNEGEGRTRHRGRT
CCHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]