| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094942
Identifier: 20094942
GI number: 20094942
Start: 1521830
End: 1522651
Strand: Reverse
Name: 20094942
Synonym: MK1506
Alternate gene names: NA
Gene position: 1522651-1521830 (Counterclockwise)
Preceding gene: 20094945
Following gene: 20094941
Centisome position: 89.83
GC content: 59.49
Gene sequence:
>822_bases TTGAAAGCCGCGGTGATTAACCGGAGCAAGGGTACCGTACTGGCTCACAGTGCCGAGATCGCGGAGTCGTTCCTCGCGAG GCTTCGGGGGTTGATGTTCCGTCGAAGGTTGGAGGAGGGAGAGGGGCTGATCCTGAAGCCCCCTTACCGCGGACGCAGAC GCTGCGCGATCCACACCTTCTTCATGCGCTTCCCGATCGACGTGGTGTTCCTGGCGGACGGGGAAGTGGTGGACGTGGTC GAGCGCCTTAAGCCATGGCGAGTGTACGTACCAGAAGAACCTCCTGAGGAGATCGTGGAGCTCCCGGCTGGCATCGTCAG CGCGACCGATACTGAGGTCGGCGACTCCGTTGAAGTTGTGGCGGGGGACCTCGAATCGGAGCTGGCCGTCAGGATCCTCA ACCGGAAGCTGGTCACGAGAAAGCTCGCCCAGGTGATCATGCGGGCGGTAGCTAAATCCGGGCTACAGGGCGAGGTGTTC TACAACAAGGACACTGGTTGCATCCACATCTCGGGGGAGGACAAGTACATCGTCGCGGACACCATTAAAGAGACGTTTGG GGACAGCGTCGAGATCGTCGAGGGGCGGGCGAAGATACTCTCCGACGATCATTCTCTCGTCGTGATCGTAAAGGATGCGC ATTCGGTCCTCGAGAAGATCGGTATCTCCCGCCCCGGTGGAGAGCTCATGTACCGAAAGGAACCCAAACCGGTGCGGTGG GGAAAGCAGCGTGAAAAAGGAGCTGATGACGGTAGTGAACAGGCTGAGGAAGGAGATAGGAACGAAGGGGAAGGGAGAAC CCGACATCGTGGACGTACGTGA
Upstream 100 bases:
>100_bases AGGATCGAAGTCCACGACTACCGCCGACGGTTGTAAGCATCGGAGGGCTCGACGGAACGTCTCGACGAAGTTCAAAGTCG CACCCCCCGGGGTGCGTTAA
Downstream 100 bases:
>100_bases GGAGGACGGCACGCTAGTGATCGTAGGTAGGGATCGTTCCGACATGTCTTACTTCATCGGTCCGGGTGGATACGTCGCCG GCAGACTTAAAGAGGAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MKAAVINRSKGTVLAHSAEIAESFLARLRGLMFRRRLEEGEGLILKPPYRGRRRCAIHTFFMRFPIDVVFLADGEVVDVV ERLKPWRVYVPEEPPEEIVELPAGIVSATDTEVGDSVEVVAGDLESELAVRILNRKLVTRKLAQVIMRAVAKSGLQGEVF YNKDTGCIHISGEDKYIVADTIKETFGDSVEIVEGRAKILSDDHSLVVIVKDAHSVLEKIGISRPGGELMYRKEPKPVRW GKQREKGADDGSEQAEEGDRNEGEGRTRHRGRT
Sequences:
>Translated_273_residues MKAAVINRSKGTVLAHSAEIAESFLARLRGLMFRRRLEEGEGLILKPPYRGRRRCAIHTFFMRFPIDVVFLADGEVVDVV ERLKPWRVYVPEEPPEEIVELPAGIVSATDTEVGDSVEVVAGDLESELAVRILNRKLVTRKLAQVIMRAVAKSGLQGEVF YNKDTGCIHISGEDKYIVADTIKETFGDSVEIVEGRAKILSDDHSLVVIVKDAHSVLEKIGISRPGGELMYRKEPKPVRW GKQREKGADDGSEQAEEGDRNEGEGRTRHRGRT >Mature_273_residues MKAAVINRSKGTVLAHSAEIAESFLARLRGLMFRRRLEEGEGLILKPPYRGRRRCAIHTFFMRFPIDVVFLADGEVVDVV ERLKPWRVYVPEEPPEEIVELPAGIVSATDTEVGDSVEVVAGDLESELAVRILNRKLVTRKLAQVIMRAVAKSGLQGEVF YNKDTGCIHISGEDKYIVADTIKETFGDSVEIVEGRAKILSDDHSLVVIVKDAHSVLEKIGISRPGGELMYRKEPKPVRW GKQREKGADDGSEQAEEGDRNEGEGRTRHRGRT
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0127 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003795 - InterPro: IPR022906 [H]
Pfam domain/function: PF02643 DUF192 [H]
EC number: NA
Molecular weight: Translated: 30470; Mature: 30470
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAAVINRSKGTVLAHSAEIAESFLARLRGLMFRRRLEEGEGLILKPPYRGRRRCAIHTF CCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHH FMRFPIDVVFLADGEVVDVVERLKPWRVYVPEEPPEEIVELPAGIVSATDTEVGDSVEVV HHHCCEEEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCEECCCCCCCCCCEEE AGDLESELAVRILNRKLVTRKLAQVIMRAVAKSGLQGEVFYNKDTGCIHISGEDKYIVAD ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEEHH TIKETFGDSVEIVEGRAKILSDDHSLVVIVKDAHSVLEKIGISRPGGELMYRKEPKPVRW HHHHHHCCCEEEECCHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEECCCCCCCC GKQREKGADDGSEQAEEGDRNEGEGRTRHRGRT CCHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKAAVINRSKGTVLAHSAEIAESFLARLRGLMFRRRLEEGEGLILKPPYRGRRRCAIHTF CCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHH FMRFPIDVVFLADGEVVDVVERLKPWRVYVPEEPPEEIVELPAGIVSATDTEVGDSVEVV HHHCCEEEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCEECCCCCCCCCCEEE AGDLESELAVRILNRKLVTRKLAQVIMRAVAKSGLQGEVFYNKDTGCIHISGEDKYIVAD ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEEHH TIKETFGDSVEIVEGRAKILSDDHSLVVIVKDAHSVLEKIGISRPGGELMYRKEPKPVRW HHHHHHCCCEEEECCHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEECCCCCCCC GKQREKGADDGSEQAEEGDRNEGEGRTRHRGRT CCHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]