Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094904

Identifier: 20094904

GI number: 20094904

Start: 1493507

End: 1494061

Strand: Direct

Name: 20094904

Synonym: MK1468

Alternate gene names: NA

Gene position: 1493507-1494061 (Clockwise)

Preceding gene: 20094903

Following gene: 20094905

Centisome position: 88.11

GC content: 60.36

Gene sequence:

>555_bases
CTGAAGGCCCAATGGGTCGCCCTGAACGAGGTAGTGAGCGAGCTTCGAGCACGGGGAGAAGAGGTGCCGGGAGAAGTCCT
CGAGAACTTGCGGACGGCGCGAGTAATCCTCCATCATTACGAGTTCGACCCTCACACATCCGCCAGGACTCTGGGGAAGG
CCCACAAGTACCTGGATAGGGCTCAGCGGGCGCTCGCCAGGATCTGTGAGTCCCATCCGGATCTACTGGATAAGTTGGTG
GAGTGGCCGAAGCGCGTGAAGGAGCTGGCCGCGAGGTTCCGGGAGGACACCGCCCGCTCTAAGTTCGAGCCGATGCCCAA
TCGACCGGTTCCCAGGGCCGGTGACGGGTTCGCCCGTGTGAGGCTCCCGGAACCTATCGAAGTCGAGAGGCTTCAGGACG
TGTGTGAGTTCGCGGGAGTGATAGTCGAGATGAAGGAGGTAGACGTAGTGGAGGTATTCGGGGACAGGGACCGCGTCGGG
ACGGCGCTCAAGGAACTCAGAGAGCTGCCGGAATCTTGGAAGAAGATGCTCGAGAAACGCAAGAGCAATGAATAA

Upstream 100 bases:

>100_bases
AGGTAGAATCCGAAGAGGACGTCGAACGCCTGTTAAGGGAGGATATGGGGGCGGAGCTATCACGGGATTCGAAGGCGTCG
GTGAGGAGAGTGCTGAACCG

Downstream 100 bases:

>100_bases
GTAAAGATCGACGGACGGTCCCGCTGATCGCACGACCGGGGTGATGCGCTCGTGATCGGTATCGCGACGGCTGACTTCCA
CGGGGACGTGGAGAAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKAQWVALNEVVSELRARGEEVPGEVLENLRTARVILHHYEFDPHTSARTLGKAHKYLDRAQRALARICESHPDLLDKLV
EWPKRVKELAARFREDTARSKFEPMPNRPVPRAGDGFARVRLPEPIEVERLQDVCEFAGVIVEMKEVDVVEVFGDRDRVG
TALKELRELPESWKKMLEKRKSNE

Sequences:

>Translated_184_residues
MKAQWVALNEVVSELRARGEEVPGEVLENLRTARVILHHYEFDPHTSARTLGKAHKYLDRAQRALARICESHPDLLDKLV
EWPKRVKELAARFREDTARSKFEPMPNRPVPRAGDGFARVRLPEPIEVERLQDVCEFAGVIVEMKEVDVVEVFGDRDRVG
TALKELRELPESWKKMLEKRKSNE
>Mature_184_residues
MKAQWVALNEVVSELRARGEEVPGEVLENLRTARVILHHYEFDPHTSARTLGKAHKYLDRAQRALARICESHPDLLDKLV
EWPKRVKELAARFREDTARSKFEPMPNRPVPRAGDGFARVRLPEPIEVERLQDVCEFAGVIVEMKEVDVVEVFGDRDRVG
TALKELRELPESWKKMLEKRKSNE

Specific function: Unknown

COG id: COG4010

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017098 [H]

Pfam domain/function: PF09869 DUF2096 [H]

EC number: NA

Molecular weight: Translated: 21303; Mature: 21303

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQWVALNEVVSELRARGEEVPGEVLENLRTARVILHHYEFDPHTSARTLGKAHKYLDR
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AQRALARICESHPDLLDKLVEWPKRVKELAARFREDTARSKFEPMPNRPVPRAGDGFARV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
RLPEPIEVERLQDVCEFAGVIVEMKEVDVVEVFGDRDRVGTALKELRELPESWKKMLEKR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KSNE
CCCC
>Mature Secondary Structure
MKAQWVALNEVVSELRARGEEVPGEVLENLRTARVILHHYEFDPHTSARTLGKAHKYLDR
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AQRALARICESHPDLLDKLVEWPKRVKELAARFREDTARSKFEPMPNRPVPRAGDGFARV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
RLPEPIEVERLQDVCEFAGVIVEMKEVDVVEVFGDRDRVGTALKELRELPESWKKMLEKR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
KSNE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]