| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094893
Identifier: 20094893
GI number: 20094893
Start: 1483561
End: 1484421
Strand: Reverse
Name: 20094893
Synonym: MK1457
Alternate gene names: NA
Gene position: 1484421-1483561 (Counterclockwise)
Preceding gene: 20094901
Following gene: 20094881
Centisome position: 87.58
GC content: 60.16
Gene sequence:
>861_bases ATGACGGATCTTAACTTGTCCCTGTTCCGCCGGGACTGTAGGTTCGTACTGGAGGAGCTGGGCTGCGTCGTGGAGGAGGT AGACAGCGACTACCAGCTGGACTTCGTAGTCCGTTCGGACGATTTCTGCTTCGCGCTGGTATGCGTCGGAGGTCTCAGCG ATCTAGCTTCGATATCGGCCTTGGGGGAGTGGGAAGAGGGACTGGCCGAGATCGCACGTGACGCGGAGGCATTGGGTTTA GGGGCTCTGGTGGTCTTTCCCCGCGAACCGAGGGAAGAAGTGGTATCCGTATCGGCGTTCTGTGAGCACTACGGTCTCGG GTTAGCCGTGACCGAGTGGGAGACGCTGCCCCTGGAGGTCATTGAGGACCCATTCAGGCTGGACTACGGCTCGGCGACCG AGGTGTTTCTCGAGGCGAAGCTCGGAAGGATTCCGGAGTGGCCGGACACCGAGCCACTGGAGGACCTCCTGGTGGGAGAC CGCCCGGTGACTCCGGGTGACGTGGTGCAAGTCGTCAAGCGTGAGGTGAGTCTCGACTGGCGGGACCTCGTGATGAGACT CCGATGGGCAGGGTACTCCGGTGAGGGACTTTCCGAAGCCCTATACTCGGCGCTAATGAGCGACGAGGTGGAGATGACGG AAGATGGTGAGCTAATGCACGTGCCCGAGCGCCTGTCCGAGGTACTCGGTGCCTTGCTGGTGTGGTTGCAGAATCGGGGC AGAGTACCAGAGGATGAGGTCTACGAGTTCTTGTTCGCACAGTTCGGCGTCCCGTACGACGTTACGTACGTTGCCCTCAA AAAGCTCGAAGAACGTGGGGAGATCGAGGTCAAAAGGGGCCTTGTGGTGGCGAAGGTTTAG
Upstream 100 bases:
>100_bases CGTCCGTCACGACACCCACGCCGAGTTTCTCGGCCGTAGACTCTATACCCACACAGATCATCGTCGACATTACGGCACCC CGCCTGCGGGGAAAGGCGCG
Downstream 100 bases:
>100_bases ATGTACCGGACCCTGGACTTGAGGTCCTCCAAGGCCCGGAGCACCGTGTCGGTGGCTTCTTCCCTCTCTTCCCTGTAGCC TCGTAGGAAGGCTCTCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTDLNLSLFRRDCRFVLEELGCVVEEVDSDYQLDFVVRSDDFCFALVCVGGLSDLASISALGEWEEGLAEIARDAEALGL GALVVFPREPREEVVSVSAFCEHYGLGLAVTEWETLPLEVIEDPFRLDYGSATEVFLEAKLGRIPEWPDTEPLEDLLVGD RPVTPGDVVQVVKREVSLDWRDLVMRLRWAGYSGEGLSEALYSALMSDEVEMTEDGELMHVPERLSEVLGALLVWLQNRG RVPEDEVYEFLFAQFGVPYDVTYVALKKLEERGEIEVKRGLVVAKV
Sequences:
>Translated_286_residues MTDLNLSLFRRDCRFVLEELGCVVEEVDSDYQLDFVVRSDDFCFALVCVGGLSDLASISALGEWEEGLAEIARDAEALGL GALVVFPREPREEVVSVSAFCEHYGLGLAVTEWETLPLEVIEDPFRLDYGSATEVFLEAKLGRIPEWPDTEPLEDLLVGD RPVTPGDVVQVVKREVSLDWRDLVMRLRWAGYSGEGLSEALYSALMSDEVEMTEDGELMHVPERLSEVLGALLVWLQNRG RVPEDEVYEFLFAQFGVPYDVTYVALKKLEERGEIEVKRGLVVAKV >Mature_285_residues TDLNLSLFRRDCRFVLEELGCVVEEVDSDYQLDFVVRSDDFCFALVCVGGLSDLASISALGEWEEGLAEIARDAEALGLG ALVVFPREPREEVVSVSAFCEHYGLGLAVTEWETLPLEVIEDPFRLDYGSATEVFLEAKLGRIPEWPDTEPLEDLLVGDR PVTPGDVVQVVKREVSLDWRDLVMRLRWAGYSGEGLSEALYSALMSDEVEMTEDGELMHVPERLSEVLGALLVWLQNRGR VPEDEVYEFLFAQFGVPYDVTYVALKKLEERGEIEVKRGLVVAKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32100; Mature: 31969
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLNLSLFRRDCRFVLEELGCVVEEVDSDYQLDFVVRSDDFCFALVCVGGLSDLASISA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHCHHHHHHHHH LGEWEEGLAEIARDAEALGLGALVVFPREPREEVVSVSAFCEHYGLGLAVTEWETLPLEV HHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHH IEDPFRLDYGSATEVFLEAKLGRIPEWPDTEPLEDLLVGDRPVTPGDVVQVVKREVSLDW HCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCH RDLVMRLRWAGYSGEGLSEALYSALMSDEVEMTEDGELMHVPERLSEVLGALLVWLQNRG HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCC RVPEDEVYEFLFAQFGVPYDVTYVALKKLEERGEIEVKRGLVVAKV CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCEEEECC >Mature Secondary Structure TDLNLSLFRRDCRFVLEELGCVVEEVDSDYQLDFVVRSDDFCFALVCVGGLSDLASISA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHCHHHHHHHHH LGEWEEGLAEIARDAEALGLGALVVFPREPREEVVSVSAFCEHYGLGLAVTEWETLPLEV HHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHH IEDPFRLDYGSATEVFLEAKLGRIPEWPDTEPLEDLLVGDRPVTPGDVVQVVKREVSLDW HCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCH RDLVMRLRWAGYSGEGLSEALYSALMSDEVEMTEDGELMHVPERLSEVLGALLVWLQNRG HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCC RVPEDEVYEFLFAQFGVPYDVTYVALKKLEERGEIEVKRGLVVAKV CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA