| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094831
Identifier: 20094831
GI number: 20094831
Start: 1421041
End: 1421427
Strand: Reverse
Name: 20094831
Synonym: MK1395
Alternate gene names: NA
Gene position: 1421427-1421041 (Counterclockwise)
Preceding gene: 20094832
Following gene: 20094829
Centisome position: 83.86
GC content: 62.53
Gene sequence:
>387_bases GTGTCCCTGAGGTGTCCACGGTGCGGAGGTCCTGTCCGTCCATCGCTCGATCGGCTGGAATGTGAGGAGTGCGAGTGGTC CAAAGAGCTCCGGAGTAGGCCCAGAAAGGACACCAGGCTCAAGTGGATGAAGGAGTACGCCAGACGATTTTTGCGGGAGG AATTCGACGACTGCGGTGTGAGTGAGGTGATAGTGAGGGGCCCCAGGGGCAAGGGGGCCGGTTACCTGGCCGCCACGGTG TACGTGGACGATCACCACAAGGCGATCGGCAAGGACGGCAGCCGCGTGAAAGAGGTCGAGGAGAAGCTCGAAACGTTGGC GGACGAGCTCGGGGTGCCTCCAGTCCGCATAACGGTTCATCCGTCGTCGGCCCTAGGTCGGCGGTAG
Upstream 100 bases:
>100_bases CCTCCGAAAGTCGAGCGTAAGCTCAGAAAGACGGAGCCTAAGGAGGAAGAAGTTGAGAGGGTAAGGAAGCTGTGGAAGCA AGTAAAGGAGGGGGACTGAA
Downstream 100 bases:
>100_bases TACGCCAGCGGATTCTTCACCCCACAATCCTTGCCGGGGCACAACCCCCATGCTTTCATCTTATCGCAGTTCGGTGGTAG ATATCGAGTACCTCCGCCCA
Product: Zn-ribbon-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSLRCPRCGGPVRPSLDRLECEECEWSKELRSRPRKDTRLKWMKEYARRFLREEFDDCGVSEVIVRGPRGKGAGYLAATV YVDDHHKAIGKDGSRVKEVEEKLETLADELGVPPVRITVHPSSALGRR
Sequences:
>Translated_128_residues MSLRCPRCGGPVRPSLDRLECEECEWSKELRSRPRKDTRLKWMKEYARRFLREEFDDCGVSEVIVRGPRGKGAGYLAATV YVDDHHKAIGKDGSRVKEVEEKLETLADELGVPPVRITVHPSSALGRR >Mature_127_residues SLRCPRCGGPVRPSLDRLECEECEWSKELRSRPRKDTRLKWMKEYARRFLREEFDDCGVSEVIVRGPRGKGAGYLAATVY VDDHHKAIGKDGSRVKEVEEKLETLADELGVPPVRITVHPSSALGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14579; Mature: 14448
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRCPRCGGPVRPSLDRLECEECEWSKELRSRPRKDTRLKWMKEYARRFLREEFDDCGV CCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH SEVIVRGPRGKGAGYLAATVYVDDHHKAIGKDGSRVKEVEEKLETLADELGVPPVRITVH HHHHEECCCCCCCCEEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEC PSSALGRR CCHHCCCC >Mature Secondary Structure SLRCPRCGGPVRPSLDRLECEECEWSKELRSRPRKDTRLKWMKEYARRFLREEFDDCGV CCCCCCCCCCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH SEVIVRGPRGKGAGYLAATVYVDDHHKAIGKDGSRVKEVEEKLETLADELGVPPVRITVH HHHHEECCCCCCCCEEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEC PSSALGRR CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA