| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094829
Identifier: 20094829
GI number: 20094829
Start: 1419288
End: 1419860
Strand: Reverse
Name: 20094829
Synonym: MK1393
Alternate gene names: NA
Gene position: 1419860-1419288 (Counterclockwise)
Preceding gene: 20094831
Following gene: 20094826
Centisome position: 83.77
GC content: 65.62
Gene sequence:
>573_bases ATGAGCGCAAACGACCACCCCATCCGCAGACCCGTGGCAGTGTACGGGGTTCACGGGGACGAGGGTCGTGCCCTCGAGCC CGTGGTGCGTAGGGTACTACCCGAAGGGTTCCGGGTCTCCAGGGTGTTCGAGAACGGACCTTACGTGAGCACGGTGGATC CGTCGTTCCACCGCTCCGAGGTCGGCGCCCGTTGGCGACGGGTAGTCGAGGACCTTCGACCGTTCGACACCTACGTGGAG CTCCACTGCTATCGGCCGAGGGCTTACAGGAAGTTGACCGCGGAGCGGCGGAGTGGTGGAGTCCCCGGCCTGGTCGACTT CGGTGCCGGGGTGCTCCTGGGCTCCGTTCCACGCCAGCACAAGCGCATCCTCGGGGACGTGCTCACGCTCACCCTGGAAG TACCCAGGAGGCCGTCGGATCGGGCGTTGAGGGTTGTCTCCGAGATATTGGGGCTGATCCCGGGGAGAACGCGTGGGGAG TTCGTGAAGGAGCTACGTCGGCGTTTCCCCGAGGCGACCGAGGAGGCCCTCCGAAGGTTCAGGAGCTACTACCCCGATCG AGACCCCTTCTGA
Upstream 100 bases:
>100_bases AAGGCGTAGGATCTGACCCTGGTTCGGATCTCGTCTCGGTACGACAGGGCCTCTTCCGGTTCTATCTCCGGAACGGATAC CGTCGGGGCGTGGGGGAACC
Downstream 100 bases:
>100_bases TCGAAAGGGTTAACTCCCGGATGCCCGGCGATCACCCACGAGAGGACGGCCCCGAAAACCTGAGGGTGACTCCCGATGAG GGGGAGTAGGGGCCGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSANDHPIRRPVAVYGVHGDEGRALEPVVRRVLPEGFRVSRVFENGPYVSTVDPSFHRSEVGARWRRVVEDLRPFDTYVE LHCYRPRAYRKLTAERRSGGVPGLVDFGAGVLLGSVPRQHKRILGDVLTLTLEVPRRPSDRALRVVSEILGLIPGRTRGE FVKELRRRFPEATEEALRRFRSYYPDRDPF
Sequences:
>Translated_190_residues MSANDHPIRRPVAVYGVHGDEGRALEPVVRRVLPEGFRVSRVFENGPYVSTVDPSFHRSEVGARWRRVVEDLRPFDTYVE LHCYRPRAYRKLTAERRSGGVPGLVDFGAGVLLGSVPRQHKRILGDVLTLTLEVPRRPSDRALRVVSEILGLIPGRTRGE FVKELRRRFPEATEEALRRFRSYYPDRDPF >Mature_189_residues SANDHPIRRPVAVYGVHGDEGRALEPVVRRVLPEGFRVSRVFENGPYVSTVDPSFHRSEVGARWRRVVEDLRPFDTYVEL HCYRPRAYRKLTAERRSGGVPGLVDFGAGVLLGSVPRQHKRILGDVLTLTLEVPRRPSDRALRVVSEILGLIPGRTRGEF VKELRRRFPEATEEALRRFRSYYPDRDPF
Specific function: Unknown
COG id: COG4073
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019218 - InterPro: IPR012026 [H]
Pfam domain/function: PF09892 DUF2119 [H]
EC number: NA
Molecular weight: Translated: 21830; Mature: 21699
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANDHPIRRPVAVYGVHGDEGRALEPVVRRVLPEGFRVSRVFENGPYVSTVDPSFHRSE CCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCHHHHH VGARWRRVVEDLRPFDTYVELHCYRPRAYRKLTAERRSGGVPGLVDFGAGVLLGSVPRQH HHHHHHHHHHHHCCHHHHHHHEECCCHHHHHHHHHHHCCCCCCHHHHCCHHHHCCCCHHH KRILGDVLTLTLEVPRRPSDRALRVVSEILGLIPGRTRGEFVKELRRRFPEATEEALRRF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH RSYYPDRDPF HHHCCCCCCC >Mature Secondary Structure SANDHPIRRPVAVYGVHGDEGRALEPVVRRVLPEGFRVSRVFENGPYVSTVDPSFHRSE CCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCHHHHH VGARWRRVVEDLRPFDTYVELHCYRPRAYRKLTAERRSGGVPGLVDFGAGVLLGSVPRQH HHHHHHHHHHHHCCHHHHHHHEECCCHHHHHHHHHHHCCCCCCHHHHCCHHHHCCCCHHH KRILGDVLTLTLEVPRRPSDRALRVVSEILGLIPGRTRGEFVKELRRRFPEATEEALRRF HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH RSYYPDRDPF HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]