Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094828

Identifier: 20094828

GI number: 20094828

Start: 1418283

End: 1419104

Strand: Direct

Name: 20094828

Synonym: MK1392

Alternate gene names: NA

Gene position: 1418283-1419104 (Clockwise)

Preceding gene: 20094827

Following gene: 20094830

Centisome position: 83.68

GC content: 65.45

Gene sequence:

>822_bases
GTGATCGAACCGTACAAGCTGGCGTGGTCGGTTGTTTTCGGTATCTCCAGGGGTCTCTACGTGTTTGCGGGGTCGTTCAT
AGCGGCGGCCCTGTACCGGTACGTGGCGGAAGAGCGGATAACGATGACCACGGCCATGTTCGTGGGCCTCATCACCGCGG
GCTTCGCGTCGGGTCCGCAGAAGCTGGCGGCACTGGCCATCAGTCAGCCCAACGTCGAGGTGCTCTCCTGGACGATCGCA
GCCCTGTTCGCGATACCCGCCAGGACCTACGGGGACGCACTGGGTAAGCGGCTCCTGGAGGCGCGGCTGTCCTCGATGAA
GCCCACGACCAAGGTATATCGGCTCCCCGAAGACCCGGACAACATCGAGGACGTCCCGGGAGAACCCCCGGCCCCCCGGG
AGGTGAAGAAGCGGATTGCGGGGCGTGAGTACGAGTTCCCGCGGGGAACCCCACGGGAGGACGTGGAGCGGGTGATCAAG
CGGGACCTGGAGGAAGAGGGAGGTGTGGGACGCGCGGTGGTGCGCGTCGACGGGGACGAGGTCAAGGTGAGGCTCGCCGG
CGCGAAGCCGCCGGTCTCGCACACGCTCCCCCCGGACAAGGTCGCGGTTTCGGTGAAACCCAAGGGTGGATCGGCCCACA
TCGGCGAAGGGGACAAGGTGATAGTGTACGCCGACGGTCAGAAGCTCTGCGAGGCGGAGGTCTGGAAGCGGTCCAAGAGC
GGCGTGGTCTTGGTGGTGGATCGGGAGCACGCGGACGAGCTCATGCGCCTGGTTACCAAGGGCAAGGACGTATCCCTCGT
CGTGGAGCCTACTGAGGAATGA

Upstream 100 bases:

>100_bases
GTGAGGTGGCCGACGCGGTGCTGGTCGGTACGTACCTGATGCGTGCCCCCGACCCGAGCGAAGCGGTAAGGAAGCTCGTG
GAAGCGGGGCGGTCGACGGA

Downstream 100 bases:

>100_bases
CTGTGCCCCGCGGTTAGCCAGGCCGGTCATCCGTCGCCTTCCGGTCGTCACCCGTCCCGGCCCCAGCCTGGACCGCGGGG
CTCATCGGCGGCCCCTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MIEPYKLAWSVVFGISRGLYVFAGSFIAAALYRYVAEERITMTTAMFVGLITAGFASGPQKLAALAISQPNVEVLSWTIA
ALFAIPARTYGDALGKRLLEARLSSMKPTTKVYRLPEDPDNIEDVPGEPPAPREVKKRIAGREYEFPRGTPREDVERVIK
RDLEEEGGVGRAVVRVDGDEVKVRLAGAKPPVSHTLPPDKVAVSVKPKGGSAHIGEGDKVIVYADGQKLCEAEVWKRSKS
GVVLVVDREHADELMRLVTKGKDVSLVVEPTEE

Sequences:

>Translated_273_residues
MIEPYKLAWSVVFGISRGLYVFAGSFIAAALYRYVAEERITMTTAMFVGLITAGFASGPQKLAALAISQPNVEVLSWTIA
ALFAIPARTYGDALGKRLLEARLSSMKPTTKVYRLPEDPDNIEDVPGEPPAPREVKKRIAGREYEFPRGTPREDVERVIK
RDLEEEGGVGRAVVRVDGDEVKVRLAGAKPPVSHTLPPDKVAVSVKPKGGSAHIGEGDKVIVYADGQKLCEAEVWKRSKS
GVVLVVDREHADELMRLVTKGKDVSLVVEPTEE
>Mature_273_residues
MIEPYKLAWSVVFGISRGLYVFAGSFIAAALYRYVAEERITMTTAMFVGLITAGFASGPQKLAALAISQPNVEVLSWTIA
ALFAIPARTYGDALGKRLLEARLSSMKPTTKVYRLPEDPDNIEDVPGEPPAPREVKKRIAGREYEFPRGTPREDVERVIK
RDLEEEGGVGRAVVRVDGDEVKVRLAGAKPPVSHTLPPDKVAVSVKPKGGSAHIGEGDKVIVYADGQKLCEAEVWKRSKS
GVVLVVDREHADELMRLVTKGKDVSLVVEPTEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29793; Mature: 29793

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEPYKLAWSVVFGISRGLYVFAGSFIAAALYRYVAEERITMTTAMFVGLITAGFASGPQ
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLAALAISQPNVEVLSWTIAALFAIPARTYGDALGKRLLEARLSSMKPTTKVYRLPEDPD
HHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCC
NIEDVPGEPPAPREVKKRIAGREYEFPRGTPREDVERVIKRDLEEEGGVGRAVVRVDGDE
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCE
VKVRLAGAKPPVSHTLPPDKVAVSVKPKGGSAHIGEGDKVIVYADGQKLCEAEVWKRSKS
EEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCC
GVVLVVDREHADELMRLVTKGKDVSLVVEPTEE
CEEEEEECHHHHHHHHHHHCCCCEEEEEECCCC
>Mature Secondary Structure
MIEPYKLAWSVVFGISRGLYVFAGSFIAAALYRYVAEERITMTTAMFVGLITAGFASGPQ
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
KLAALAISQPNVEVLSWTIAALFAIPARTYGDALGKRLLEARLSSMKPTTKVYRLPEDPD
HHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCC
NIEDVPGEPPAPREVKKRIAGREYEFPRGTPREDVERVIKRDLEEEGGVGRAVVRVDGDE
CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCE
VKVRLAGAKPPVSHTLPPDKVAVSVKPKGGSAHIGEGDKVIVYADGQKLCEAEVWKRSKS
EEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCC
GVVLVVDREHADELMRLVTKGKDVSLVVEPTEE
CEEEEEECHHHHHHHHHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA