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The map label for this gene is ybfF [C]

Identifier: 20094817

GI number: 20094817

Start: 1407623

End: 1409290

Strand: Direct

Name: ybfF [C]

Synonym: MK1381

Alternate gene names: 20094817

Gene position: 1407623-1409290 (Clockwise)

Preceding gene: 20094812

Following gene: 20094818

Centisome position: 83.05

GC content: 62.29

Gene sequence:

>1668_bases
GTGCTCGACGGAGGACTGACGCTGTTAGTACTCACCGCCCTGGCACTGTTCAGGGAGAGGAAGAAGCGGCCGCAAAAGGT
CTCGGTGGTGATTCCGGCGTACAACGAAGAGAAGACTGTAGCTCGCGTAGTTCGGGCCGCGAAGGAATGCGACCTGGTTA
ACGAGGTAATAGTTGTAGATGACGGTAGTGAGGATAGGACCGCGGAAGAGGCCGAAGCCGCCGGCGCCATCGTGATCTCG
CACTCGGTAAACCGCGGCAAGGGAGAGGCGATGAAAACCGGGCTAAAACACGCCTCCGGCGAGATCGTGGCCTTCGTGGA
TGCCGACATCAAGAACATTCGACCCGAGATGATCGAGAAGATGATCCGGCCCGTACTCGAGGGGGAGGCGGATCTCGTCA
AGACCAAGTTCAAGCGCAAGGCGGGCAGGGTCACGCTCCTGACCGCCAAACCCCTACTGAGGTTCTTCTTCCCGGAGGTC
GCGCACTTGGAGCAACCGCTCAGCGGACAGATCTGCGCCCGTAGGAAGCTGCTCGAGCGCGTCGACTTCGAGCCGGACTA
CGGTGTGGACATCGGTATAATCCTCGACGCCGTAGCCCTCGGCGCCAGGATCGAGGAGGTGGACATCGGTGAGATCAAGC
ACGAGATGCAACCCCTGGAACGACTCCACCGGATGGCCCTCCAGGTCGTCCGGACGATCCTGGATCGGGCCCATAAGTAC
GGTCGTGTCGTCCTCAGGTGGAACGTCGGCAAAGCGCTCAACCGCATGAACCTGGGCGTGTCCCTGCTCGCCTTGGCCCT
CGCCACCCTGTTCTACACGGAGCTCCCGTTGGCGAGCGTGCTGGCGCTGGGGATCCTGGGTCTGGGGATCGCACTGTTCT
CCCTGGCCCAACTCGTCTACGAGCTCCTCCGCGTCGAGGGTAAGAAGCGGCGCATCCTCCGCCCGTTCCTCCACATGCAC
GCTTCCGTGATCATGTCGTTGGCGGTCGTCGCCGTGCTCGTCGGTGCGATGTTCTCGTCGATACAGATCGCCCACGACCG
CGTCGAGGTCAACCCGCTACCCAGGAAGGTCGTCTGGGGAGAACGGGAGGTCAAAGCCGAAGGTCCGTACGTGGTGCAGT
ACGGTCGTGAGTTGAAGATGGGGAGGAACGTCCTCAAGGTGCTGGACCTGAAGCCCGACGATGTCCTCGTTTACCAGCGG
GGGGAGTACAGGGTCGAGAGCGCGGGCCGTGATAACCTGCTCATGGTCCCGACTGAACTGGCTCGACAGCTCGGGATCAA
GCCGGGGAACGCCACGGACTCGGAGATACGGCTGGCGTTCCGAAACATCACGGTCAAGCGTAAGGTGGAGGGCCCGGACG
TCAACATCCGGGTGACCGCGGTTCTGTCCGCGACCCCCGACCGCGCCGAGGCCTTGACGGTGTACGTGGACGGTAAGAAG
GAGGCGTGGATTCCGGTGGCCACCAGGGGCGGATCCGTCTACGTGTACGTCTCGGGGTACGGGCTGATAAAGCTGGAAGA
CCGGAGTGTCGTCTACGTAGGCAACAGGGAGATCCTCCTGAAGCTCGAGGACACCGACATTGAGACGCTCCTCCTCGCTC
CGGCCGAGCCGACACCCTTCGCGGTCATCGAGCTCAAGATGCCGTCGGTGAGGGCAGTGGTCGAATGA

Upstream 100 bases:

>100_bases
TCATTACCTTCCCCGGGTGCTCCGACGCGGCGATGTCGCCGACGATCCTTTTTAGCACGAGGCTCCTCGGCAACGAGATC
ACTCCCCGCGGGTGATTCAA

Downstream 100 bases:

>100_bases
GGGAGCTCCTCGCCGTCGAGCCGAGCCCGGGCGCCGACCTCCGCGTATGCCTCACGTACCCGAACGAGTACCGCGGTATG
GCCTCCAACCTCGGATTCCA

Product: cell wall biosynthesis glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MLDGGLTLLVLTALALFRERKKRPQKVSVVIPAYNEEKTVARVVRAAKECDLVNEVIVVDDGSEDRTAEEAEAAGAIVIS
HSVNRGKGEAMKTGLKHASGEIVAFVDADIKNIRPEMIEKMIRPVLEGEADLVKTKFKRKAGRVTLLTAKPLLRFFFPEV
AHLEQPLSGQICARRKLLERVDFEPDYGVDIGIILDAVALGARIEEVDIGEIKHEMQPLERLHRMALQVVRTILDRAHKY
GRVVLRWNVGKALNRMNLGVSLLALALATLFYTELPLASVLALGILGLGIALFSLAQLVYELLRVEGKKRRILRPFLHMH
ASVIMSLAVVAVLVGAMFSSIQIAHDRVEVNPLPRKVVWGEREVKAEGPYVVQYGRELKMGRNVLKVLDLKPDDVLVYQR
GEYRVESAGRDNLLMVPTELARQLGIKPGNATDSEIRLAFRNITVKRKVEGPDVNIRVTAVLSATPDRAEALTVYVDGKK
EAWIPVATRGGSVYVYVSGYGLIKLEDRSVVYVGNREILLKLEDTDIETLLLAPAEPTPFAVIELKMPSVRAVVE

Sequences:

>Translated_555_residues
MLDGGLTLLVLTALALFRERKKRPQKVSVVIPAYNEEKTVARVVRAAKECDLVNEVIVVDDGSEDRTAEEAEAAGAIVIS
HSVNRGKGEAMKTGLKHASGEIVAFVDADIKNIRPEMIEKMIRPVLEGEADLVKTKFKRKAGRVTLLTAKPLLRFFFPEV
AHLEQPLSGQICARRKLLERVDFEPDYGVDIGIILDAVALGARIEEVDIGEIKHEMQPLERLHRMALQVVRTILDRAHKY
GRVVLRWNVGKALNRMNLGVSLLALALATLFYTELPLASVLALGILGLGIALFSLAQLVYELLRVEGKKRRILRPFLHMH
ASVIMSLAVVAVLVGAMFSSIQIAHDRVEVNPLPRKVVWGEREVKAEGPYVVQYGRELKMGRNVLKVLDLKPDDVLVYQR
GEYRVESAGRDNLLMVPTELARQLGIKPGNATDSEIRLAFRNITVKRKVEGPDVNIRVTAVLSATPDRAEALTVYVDGKK
EAWIPVATRGGSVYVYVSGYGLIKLEDRSVVYVGNREILLKLEDTDIETLLLAPAEPTPFAVIELKMPSVRAVVE
>Mature_555_residues
MLDGGLTLLVLTALALFRERKKRPQKVSVVIPAYNEEKTVARVVRAAKECDLVNEVIVVDDGSEDRTAEEAEAAGAIVIS
HSVNRGKGEAMKTGLKHASGEIVAFVDADIKNIRPEMIEKMIRPVLEGEADLVKTKFKRKAGRVTLLTAKPLLRFFFPEV
AHLEQPLSGQICARRKLLERVDFEPDYGVDIGIILDAVALGARIEEVDIGEIKHEMQPLERLHRMALQVVRTILDRAHKY
GRVVLRWNVGKALNRMNLGVSLLALALATLFYTELPLASVLALGILGLGIALFSLAQLVYELLRVEGKKRRILRPFLHMH
ASVIMSLAVVAVLVGAMFSSIQIAHDRVEVNPLPRKVVWGEREVKAEGPYVVQYGRELKMGRNVLKVLDLKPDDVLVYQR
GEYRVESAGRDNLLMVPTELARQLGIKPGNATDSEIRLAFRNITVKRKVEGPDVNIRVTAVLSATPDRAEALTVYVDGKK
EAWIPVATRGGSVYVYVSGYGLIKLEDRSVVYVGNREILLKLEDTDIETLLLAPAEPTPFAVIELKMPSVRAVVE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=135, Percent_Identity=34.0740740740741, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI1788588, Length=121, Percent_Identity=33.8842975206612, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25146207, Length=131, Percent_Identity=35.1145038167939, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 61532; Mature: 61532

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDGGLTLLVLTALALFRERKKRPQKVSVVIPAYNEEKTVARVVRAAKECDLVNEVIVVD
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHCEEEEEE
DGSEDRTAEEAEAAGAIVISHSVNRGKGEAMKTGLKHASGEIVAFVDADIKNIRPEMIEK
CCCCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCHHHCCHHHHHH
MIRPVLEGEADLVKTKFKRKAGRVTLLTAKPLLRFFFPEVAHLEQPLSGQICARRKLLER
HHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHH
VDFEPDYGVDIGIILDAVALGARIEEVDIGEIKHEMQPLERLHRMALQVVRTILDRAHKY
CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRVVLRWNVGKALNRMNLGVSLLALALATLFYTELPLASVLALGILGLGIALFSLAQLVY
CEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ELLRVEGKKRRILRPFLHMHASVIMSLAVVAVLVGAMFSSIQIAHDRVEVNPLPRKVVWG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEECC
EREVKAEGPYVVQYGRELKMGRNVLKVLDLKPDDVLVYQRGEYRVESAGRDNLLMVPTEL
CCEECCCCCEEEECCCHHHHCHHHHHHHCCCCCCEEEEECCCEEECCCCCCCEEEECHHH
ARQLGIKPGNATDSEIRLAFRNITVKRKVEGPDVNIRVTAVLSATPDRAEALTVYVDGKK
HHHHCCCCCCCCCHHHEEEEECEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEECCCC
EAWIPVATRGGSVYVYVSGYGLIKLEDRSVVYVGNREILLKLEDTDIETLLLAPAEPTPF
CEEEEEEECCCEEEEEEECCEEEEECCCEEEEECCCEEEEEEECCCEEEEEEECCCCCCE
AVIELKMPSVRAVVE
EEEEEECCCCHHHCC
>Mature Secondary Structure
MLDGGLTLLVLTALALFRERKKRPQKVSVVIPAYNEEKTVARVVRAAKECDLVNEVIVVD
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCHHCEEEEEE
DGSEDRTAEEAEAAGAIVISHSVNRGKGEAMKTGLKHASGEIVAFVDADIKNIRPEMIEK
CCCCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCHHHCCHHHHHH
MIRPVLEGEADLVKTKFKRKAGRVTLLTAKPLLRFFFPEVAHLEQPLSGQICARRKLLER
HHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHH
VDFEPDYGVDIGIILDAVALGARIEEVDIGEIKHEMQPLERLHRMALQVVRTILDRAHKY
CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GRVVLRWNVGKALNRMNLGVSLLALALATLFYTELPLASVLALGILGLGIALFSLAQLVY
CEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
ELLRVEGKKRRILRPFLHMHASVIMSLAVVAVLVGAMFSSIQIAHDRVEVNPLPRKVVWG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCEECC
EREVKAEGPYVVQYGRELKMGRNVLKVLDLKPDDVLVYQRGEYRVESAGRDNLLMVPTEL
CCEECCCCCEEEECCCHHHHCHHHHHHHCCCCCCEEEEECCCEEECCCCCCCEEEECHHH
ARQLGIKPGNATDSEIRLAFRNITVKRKVEGPDVNIRVTAVLSATPDRAEALTVYVDGKK
HHHHCCCCCCCCCHHHEEEEECEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEEECCCC
EAWIPVATRGGSVYVYVSGYGLIKLEDRSVVYVGNREILLKLEDTDIETLLLAPAEPTPF
CEEEEEEECCCEEEEEEECCEEEEECCCEEEEECCCEEEEEEECCCEEEEEEECCCCCCE
AVIELKMPSVRAVVE
EEEEEECCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]