| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094782
Identifier: 20094782
GI number: 20094782
Start: 1367297
End: 1368256
Strand: Reverse
Name: 20094782
Synonym: MK1346
Alternate gene names: NA
Gene position: 1368256-1367297 (Counterclockwise)
Preceding gene: 20094783
Following gene: 20094781
Centisome position: 80.72
GC content: 63.54
Gene sequence:
>960_bases TTGCTCCCCTACCTCGTCCTAGGACTAGTCCTAGCACTAGCCCCAGCCTCAGGAGAACTGCTGATCCGGGGGAGTCTGTC CGAGGACAAGGCGTTCCTGAAGGAGTACCTCGAGTCCGAGGTACTACCCAAGTGGAAGGACGACCCGCGCGTGATCGTGG ATTACAGTGATTGGCACCATCGGTTGGTCTACCTACCGGACAGGGACCTGTTCGTGGGTACCGACGGGCCGGCCACGGTG ACCGTCGGACCGGGTAGCGTTCGGGTGGAGGTTCAGCTGGCCACGGTGACCGAGGCGGGTAGGGAGTCGATCCAGGTCTC GAAGAGCGTGCGTGATCCCGCGGTGGTCGCGAATTCGGGGTTCGATAGTGTGACCGTCCTCGTCGGCGACTACGTCTGCG GGGTGGAGGAGAAACTGGTCGTGGGTGGCCCACCGTATTACATCGCGGTCCTGAAGGAGGGTGACCGGGTGATCGACAGG GAGGATTTGGGTGGCCTCTCGGTGTCGGACGTTGAGTACGAGGTATACTCGGACCGGGTGGTCATGAGGGTCCTGGGGTT CGGTGAGGGGGGCAAGCCGTTGGCCATCATCGTGACCTTCGACCTGAAGGACGGTAGGATCCTCGTGGACAGGGAGGAGA TCACGGACGCGGCGCTGATCGAGAAACTCTCCGGGGAGCTGGTGGAGTACCCCGAAGGGGCCGTCCTGCGCACGGGCTCG GGGGTCGAACCCCTGTACGTGAAGTTCGGCGCGCCGAGGGACGACCCGTTGGTCCGGTTCATCGACAAGGTCGTCCGGAT GTACGGGCAGGGTGCTAGCGAGGAGGAGCTTCGGCGGGTGATGAGCGAGCACTCGAACGTCGAGTTCCTGTTCCCGGAGA GGGGCGGCGGTGAAGAATCGGGGCTCCCGGTCTGGGTACTACCGTTATTACCGGTGCCGCTGACGGTGAGAAGGCGGTGA
Upstream 100 bases:
>100_bases GGGACCCTGGGGACCTTCCTGAGCATATTAGCCCAGGTCGTCACGCTCGCGGTACAACTGGCCAGTCTAATCCCACTACC GACCTGAGAGGGGTGCCGGC
Downstream 100 bases:
>100_bases GGCGGTACCGGACTACGCCCCCTCCTCGATCCCTCCGGTGAGGGTACCCGTGACCGTCTCGGTTCGGGACCGGGAAACGC TTTCGTCCCCGTCCCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MLPYLVLGLVLALAPASGELLIRGSLSEDKAFLKEYLESEVLPKWKDDPRVIVDYSDWHHRLVYLPDRDLFVGTDGPATV TVGPGSVRVEVQLATVTEAGRESIQVSKSVRDPAVVANSGFDSVTVLVGDYVCGVEEKLVVGGPPYYIAVLKEGDRVIDR EDLGGLSVSDVEYEVYSDRVVMRVLGFGEGGKPLAIIVTFDLKDGRILVDREEITDAALIEKLSGELVEYPEGAVLRTGS GVEPLYVKFGAPRDDPLVRFIDKVVRMYGQGASEEELRRVMSEHSNVEFLFPERGGGEESGLPVWVLPLLPVPLTVRRR
Sequences:
>Translated_319_residues MLPYLVLGLVLALAPASGELLIRGSLSEDKAFLKEYLESEVLPKWKDDPRVIVDYSDWHHRLVYLPDRDLFVGTDGPATV TVGPGSVRVEVQLATVTEAGRESIQVSKSVRDPAVVANSGFDSVTVLVGDYVCGVEEKLVVGGPPYYIAVLKEGDRVIDR EDLGGLSVSDVEYEVYSDRVVMRVLGFGEGGKPLAIIVTFDLKDGRILVDREEITDAALIEKLSGELVEYPEGAVLRTGS GVEPLYVKFGAPRDDPLVRFIDKVVRMYGQGASEEELRRVMSEHSNVEFLFPERGGGEESGLPVWVLPLLPVPLTVRRR >Mature_319_residues MLPYLVLGLVLALAPASGELLIRGSLSEDKAFLKEYLESEVLPKWKDDPRVIVDYSDWHHRLVYLPDRDLFVGTDGPATV TVGPGSVRVEVQLATVTEAGRESIQVSKSVRDPAVVANSGFDSVTVLVGDYVCGVEEKLVVGGPPYYIAVLKEGDRVIDR EDLGGLSVSDVEYEVYSDRVVMRVLGFGEGGKPLAIIVTFDLKDGRILVDREEITDAALIEKLSGELVEYPEGAVLRTGS GVEPLYVKFGAPRDDPLVRFIDKVVRMYGQGASEEELRRVMSEHSNVEFLFPERGGGEESGLPVWVLPLLPVPLTVRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35025; Mature: 35025
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPYLVLGLVLALAPASGELLIRGSLSEDKAFLKEYLESEVLPKWKDDPRVIVDYSDWHH CCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCE RLVYLPDRDLFVGTDGPATVTVGPGSVRVEVQLATVTEAGRESIQVSKSVRDPAVVANSG EEEEECCCCEEEECCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHCCCCCEEEECCC FDSVTVLVGDYVCGVEEKLVVGGPPYYIAVLKEGDRVIDREDLGGLSVSDVEYEVYSDRV CCEEEEEEECEECCCCCEEEECCCCEEEEEEECCCEEECHHCCCCCEECCEEEEHHHCCE VMRVLGFGEGGKPLAIIVTFDLKDGRILVDREEITDAALIEKLSGELVEYPEGAVLRTGS EEEEEECCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHCCHHEECCCCCEEECCC GVEPLYVKFGAPRDDPLVRFIDKVVRMYGQGASEEELRRVMSEHSNVEFLFPERGGGEES CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCC GLPVWVLPLLPVPLTVRRR CCCEEEEECCCCCEEECCC >Mature Secondary Structure MLPYLVLGLVLALAPASGELLIRGSLSEDKAFLKEYLESEVLPKWKDDPRVIVDYSDWHH CCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCE RLVYLPDRDLFVGTDGPATVTVGPGSVRVEVQLATVTEAGRESIQVSKSVRDPAVVANSG EEEEECCCCEEEECCCCEEEEECCCCEEEEEEEEEECCCCHHHHHHHHCCCCCEEEECCC FDSVTVLVGDYVCGVEEKLVVGGPPYYIAVLKEGDRVIDREDLGGLSVSDVEYEVYSDRV CCEEEEEEECEECCCCCEEEECCCCEEEEEEECCCEEECHHCCCCCEECCEEEEHHHCCE VMRVLGFGEGGKPLAIIVTFDLKDGRILVDREEITDAALIEKLSGELVEYPEGAVLRTGS EEEEEECCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHCCHHEECCCCCEEECCC GVEPLYVKFGAPRDDPLVRFIDKVVRMYGQGASEEELRRVMSEHSNVEFLFPERGGGEES CCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCC GLPVWVLPLLPVPLTVRRR CCCEEEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA