| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094781
Identifier: 20094781
GI number: 20094781
Start: 1366319
End: 1367176
Strand: Reverse
Name: 20094781
Synonym: MK1345
Alternate gene names: NA
Gene position: 1367176-1366319 (Counterclockwise)
Preceding gene: 20094782
Following gene: 20094775
Centisome position: 80.66
GC content: 71.1
Gene sequence:
>858_bases TTGTCCTTCCACGTGACCGTGGACGTGACCACCGAGTGCCCCCACGACTGCCCGCACTGCAACCTCCGGGGGACGCGGCG CGCCGGGCACCTGGACCCGGAGGTCCTCGAGCGGATCCTGGCCGAGGTCGCGGACCGGTACGACCTGGACTTCGTGATCC TGACGGGCGGCGAGCCCTGCCTACACCCCAGGTTCGGGGAACTCGTCGAACTGTGCCGGAGGTACGACGCCGGCGTGGGC GTCAACGTGGCCACGGAGGTCCACCCCGCCCTGGCCGACGTCGACCACGTCTACGTGGCCCTCGAGCCGCACCGGGGGTA CGGGCTGGAGGGCGCCCTGAGGACCTGGGAGGAGGTGGCCCGGCTCGAGCCGGACGAGGTGTACGCCAACACCGTGGCCT GTCGGGACACCTACGGCGAGCTCAGGAGGGTCAACGAGGTTGCGGTCGAGCTGGGCGCCGCGGCGCACTTCGTCATCGCG TACGTACCCCCGGGACCCGACGATCCCCTGGACGACTACCCGCACGACGAGCTGCCCGGGCTGGTCCGCGGGTTGAGGCG GGCCTGTCTCGCCGGGATGCCCTACCAGGAGGAGGTGCCCTTCAGCTCGTGTCGGCACGGGGAGTACAACCTCCACGTCC GGGCGGACGGCGAGCTGACGCCGTGTCAGCACTGGAAGACGTACACGCTGGCGGACCTCGACGAGTTCGAAGGCATGAGG GGGCTCGAACCCGAGGGACCGTGCCGGGACTGTCCGAGGTTCGAGGAGTGCCAGGGCGGGTGCAACGCCTACGCCTGGAA CGTCGCGGGCCGGCTCATGCCCGATCCGCGCTGCCCCAGGGTGCGGGGCTCGCCGTGA
Upstream 100 bases:
>100_bases CCTCCTCGATCCCTCCGGTGAGGGTACCCGTGACCGTCTCGGTTCGGGACCGGGAAACGCTTTCGTCCCCGTCCCGCGGT CCGACCCGGGGCCGCCGTCC
Downstream 100 bases:
>100_bases GGTCCCCGATGGGGTGACGACCGCGGCCGCGGACCCGTGGAGGTATCGCCCGCGGGGATCCCGGGAGCGTCGGGGTACCG GACGACCGTGCGAGAGGGTC
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSFHVTVDVTTECPHDCPHCNLRGTRRAGHLDPEVLERILAEVADRYDLDFVILTGGEPCLHPRFGELVELCRRYDAGVG VNVATEVHPALADVDHVYVALEPHRGYGLEGALRTWEEVARLEPDEVYANTVACRDTYGELRRVNEVAVELGAAAHFVIA YVPPGPDDPLDDYPHDELPGLVRGLRRACLAGMPYQEEVPFSSCRHGEYNLHVRADGELTPCQHWKTYTLADLDEFEGMR GLEPEGPCRDCPRFEECQGGCNAYAWNVAGRLMPDPRCPRVRGSP
Sequences:
>Translated_285_residues MSFHVTVDVTTECPHDCPHCNLRGTRRAGHLDPEVLERILAEVADRYDLDFVILTGGEPCLHPRFGELVELCRRYDAGVG VNVATEVHPALADVDHVYVALEPHRGYGLEGALRTWEEVARLEPDEVYANTVACRDTYGELRRVNEVAVELGAAAHFVIA YVPPGPDDPLDDYPHDELPGLVRGLRRACLAGMPYQEEVPFSSCRHGEYNLHVRADGELTPCQHWKTYTLADLDEFEGMR GLEPEGPCRDCPRFEECQGGCNAYAWNVAGRLMPDPRCPRVRGSP >Mature_284_residues SFHVTVDVTTECPHDCPHCNLRGTRRAGHLDPEVLERILAEVADRYDLDFVILTGGEPCLHPRFGELVELCRRYDAGVGV NVATEVHPALADVDHVYVALEPHRGYGLEGALRTWEEVARLEPDEVYANTVACRDTYGELRRVNEVAVELGAAAHFVIAY VPPGPDDPLDDYPHDELPGLVRGLRRACLAGMPYQEEVPFSSCRHGEYNLHVRADGELTPCQHWKTYTLADLDEFEGMRG LEPEGPCRDCPRFEECQGGCNAYAWNVAGRLMPDPRCPRVRGSP
Specific function: Unknown
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31817; Mature: 31686
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFHVTVDVTTECPHDCPHCNLRGTRRAGHLDPEVLERILAEVADRYDLDFVILTGGEPC CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC LHPRFGELVELCRRYDAGVGVNVATEVHPALADVDHVYVALEPHRGYGLEGALRTWEEVA CCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHH RLEPDEVYANTVACRDTYGELRRVNEVAVELGAAAHFVIAYVPPGPDDPLDDYPHDELPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCHHH LVRGLRRACLAGMPYQEEVPFSSCRHGEYNLHVRADGELTPCQHWKTYTLADLDEFEGMR HHHHHHHHHHCCCCCHHCCCHHHCCCCCEEEEEEECCCCCCHHCCCEEEECCHHHHCCCC GLEPEGPCRDCPRFEECQGGCNAYAWNVAGRLMPDPRCPRVRGSP CCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure SFHVTVDVTTECPHDCPHCNLRGTRRAGHLDPEVLERILAEVADRYDLDFVILTGGEPC EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC LHPRFGELVELCRRYDAGVGVNVATEVHPALADVDHVYVALEPHRGYGLEGALRTWEEVA CCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHH RLEPDEVYANTVACRDTYGELRRVNEVAVELGAAAHFVIAYVPPGPDDPLDDYPHDELPG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCHHH LVRGLRRACLAGMPYQEEVPFSSCRHGEYNLHVRADGELTPCQHWKTYTLADLDEFEGMR HHHHHHHHHHCCCCCHHCCCHHHCCCCCEEEEEEECCCCCCHHCCCEEEECCHHHHCCCC GLEPEGPCRDCPRFEECQGGCNAYAWNVAGRLMPDPRCPRVRGSP CCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA