| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094779
Identifier: 20094779
GI number: 20094779
Start: 1364466
End: 1365077
Strand: Direct
Name: 20094779
Synonym: MK1343
Alternate gene names: NA
Gene position: 1364466-1365077 (Clockwise)
Preceding gene: 20094778
Following gene: 20094780
Centisome position: 80.5
GC content: 59.15
Gene sequence:
>612_bases TTGGTCGGATCGCGTATCCCGATACCCTCGGACCCCGTGGAACGGATCCGGGCCCTCCGAGTCCTGAGGGAGGTCTACCG CCGGGGGAAGAAGCCGAGCCTGGAGGTGACCTACCGGACCGTCAACGGGAGCACGTGCGGTCCCTATTACGTCGCGAGGT GGAGGTGTGACTCGCGGTTCAAACACGGTAGGACCCTCTACTTGGGTAAGCCGGAAAACGAAAGCGTTTCCTTCGTCGAG TGGTTGGTTTCCCTTGATCGGAACGAGGTTTTGAAACTCGCGCGGCACTTGATGCGCAATCTCCGCTCGGTACTCAAGAC CCTCCTGACCGAGATCTCGAATCTACCATACAAACGGGCGCGACGAGTACTCGCCCGCGGGCTCGCACTGACATTCGACG CCAGACCCTCGAACTCACCGCGAATCCGGGACGTGTTAGAGGAACTCCCCGACCGGTTGGAATCCTTCCTGATCAGGACC CTGGGAGGCTGGCCGGCGCATTACTCGAGTCACTTGAATAAGATCATCCGTTCTAGAAGGAAGTCCCTCGACGGGAAACA CGAGATCCCCGACGTACTCCTAGAGCTCGAACGCTGGAAACTCGAGTACTGA
Upstream 100 bases:
>100_bases TGGGTCCTCCGCCCCGGATGGCAAGGCTTATATCCTGAGGTACCGCTCTACCCCTGACTCCATACAATTTGGAGGCACAT CGGGGGATCACGTGCCGGGG
Downstream 100 bases:
>100_bases CACGCACCGCCACGGGATCGCCACCGACCGGACGCGGCGTACGGGGGCCGGGGGTCCGTCCGTTGGACGTGCGCTCGCTC TACGGGCTCGCGTTGGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MVGSRIPIPSDPVERIRALRVLREVYRRGKKPSLEVTYRTVNGSTCGPYYVARWRCDSRFKHGRTLYLGKPENESVSFVE WLVSLDRNEVLKLARHLMRNLRSVLKTLLTEISNLPYKRARRVLARGLALTFDARPSNSPRIRDVLEELPDRLESFLIRT LGGWPAHYSSHLNKIIRSRRKSLDGKHEIPDVLLELERWKLEY
Sequences:
>Translated_203_residues MVGSRIPIPSDPVERIRALRVLREVYRRGKKPSLEVTYRTVNGSTCGPYYVARWRCDSRFKHGRTLYLGKPENESVSFVE WLVSLDRNEVLKLARHLMRNLRSVLKTLLTEISNLPYKRARRVLARGLALTFDARPSNSPRIRDVLEELPDRLESFLIRT LGGWPAHYSSHLNKIIRSRRKSLDGKHEIPDVLLELERWKLEY >Mature_203_residues MVGSRIPIPSDPVERIRALRVLREVYRRGKKPSLEVTYRTVNGSTCGPYYVARWRCDSRFKHGRTLYLGKPENESVSFVE WLVSLDRNEVLKLARHLMRNLRSVLKTLLTEISNLPYKRARRVLARGLALTFDARPSNSPRIRDVLEELPDRLESFLIRT LGGWPAHYSSHLNKIIRSRRKSLDGKHEIPDVLLELERWKLEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23788; Mature: 23788
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGSRIPIPSDPVERIRALRVLREVYRRGKKPSLEVTYRTVNGSTCGPYYVARWRCDSRF CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHEECHHHHH KHGRTLYLGKPENESVSFVEWLVSLDRNEVLKLARHLMRNLRSVLKTLLTEISNLPYKRA CCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RRVLARGLALTFDARPSNSPRIRDVLEELPDRLESFLIRTLGGWPAHYSSHLNKIIRSRR HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KSLDGKHEIPDVLLELERWKLEY HCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MVGSRIPIPSDPVERIRALRVLREVYRRGKKPSLEVTYRTVNGSTCGPYYVARWRCDSRF CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHEECHHHHH KHGRTLYLGKPENESVSFVEWLVSLDRNEVLKLARHLMRNLRSVLKTLLTEISNLPYKRA CCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RRVLARGLALTFDARPSNSPRIRDVLEELPDRLESFLIRTLGGWPAHYSSHLNKIIRSRR HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KSLDGKHEIPDVLLELERWKLEY HCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA