Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094778

Identifier: 20094778

GI number: 20094778

Start: 1361829

End: 1362332

Strand: Direct

Name: 20094778

Synonym: MK1342

Alternate gene names: NA

Gene position: 1361829-1362332 (Clockwise)

Preceding gene: 20094777

Following gene: 20094779

Centisome position: 80.35

GC content: 69.25

Gene sequence:

>504_bases
CTGAGTCCTACCGCGACTCGTCCTCTCGAGACCGCCGACCTGGTACCTGGAACGCGCGCTCGAGGACCCCGACACGTTGC
TGAGGTACGCGCTCACGGCGCGGTCGTCGTCAGCCTACCGCTGCCCCTGGCCCAGATCGAGTGGATCCTGGCCCTGTTCG
GGCCGAGGTACGACATCTTCGGCGCGCTCGACACCCTGCTCCGGGTGCTGAGGACCCTACTCGCGGTCCCGTCGAACGCG
TCCGTCGTCCTGTCCGCGCTGCTCCCGACGCTCCCGTACCTCCTCCCGGTCCCGCCGTGGCTCGAGCGCGACGTCGACGG
GTTCCACCTCGATCCGCTCCTCCGACAGACCGTGGTCCCCGGTCAGCCTCCCCAGAGTCGCCCTCAGGAAGCGGGTGCTC
GGGTAGTACCTGCCCCTCATGATCGGGGACCCCAGGGGATCCCCGGGCGGCGGGTGAGGTCCACGGGCACTTATCCGTGT
CGGCGTTTCCTACGTCCCGTTTGA

Upstream 100 bases:

>100_bases
ACACGGGGCTACCGCTCCCCCTCGTCGGCGCCCTCGCCTGGCTCCTCCAGTGGGCCTTCGACGAGAACGAGCTGACGACG
TTCAACGTCCCGCCCAACTA

Downstream 100 bases:

>100_bases
TGTTTCCGTCTAGGGGTCGAGCCCAGCCCGCGGGCGATTGGGGCCCGTTCGTAAGAGTACAACGTGTGAGGCGCGAGAAG
TTGACGTTTCATTGTCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSPTATRPLETADLVPGTRARGPRHVAEVRAHGAVVVSLPLPLAQIEWILALFGPRYDIFGALDTLLRVLRTLLAVPSNA
SVVLSALLPTLPYLLPVPPWLERDVDGFHLDPLLRQTVVPGQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPC
RRFLRPV

Sequences:

>Translated_167_residues
MSPTATRPLETADLVPGTRARGPRHVAEVRAHGAVVVSLPLPLAQIEWILALFGPRYDIFGALDTLLRVLRTLLAVPSNA
SVVLSALLPTLPYLLPVPPWLERDVDGFHLDPLLRQTVVPGQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPC
RRFLRPV
>Mature_166_residues
SPTATRPLETADLVPGTRARGPRHVAEVRAHGAVVVSLPLPLAQIEWILALFGPRYDIFGALDTLLRVLRTLLAVPSNAS
VVLSALLPTLPYLLPVPPWLERDVDGFHLDPLLRQTVVPGQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPCR
RFLRPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18209; Mature: 18077

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTATRPLETADLVPGTRARGPRHVAEVRAHGAVVVSLPLPLAQIEWILALFGPRYDIF
CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCHHHH
GALDTLLRVLRTLLAVPSNASVVLSALLPTLPYLLPVPPWLERDVDGFHLDPLLRQTVVP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHCCC
GQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPCRRFLRPV
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure 
SPTATRPLETADLVPGTRARGPRHVAEVRAHGAVVVSLPLPLAQIEWILALFGPRYDIF
CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCHHHH
GALDTLLRVLRTLLAVPSNASVVLSALLPTLPYLLPVPPWLERDVDGFHLDPLLRQTVVP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHCCC
GQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPCRRFLRPV
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA