| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094778
Identifier: 20094778
GI number: 20094778
Start: 1361829
End: 1362332
Strand: Direct
Name: 20094778
Synonym: MK1342
Alternate gene names: NA
Gene position: 1361829-1362332 (Clockwise)
Preceding gene: 20094777
Following gene: 20094779
Centisome position: 80.35
GC content: 69.25
Gene sequence:
>504_bases CTGAGTCCTACCGCGACTCGTCCTCTCGAGACCGCCGACCTGGTACCTGGAACGCGCGCTCGAGGACCCCGACACGTTGC TGAGGTACGCGCTCACGGCGCGGTCGTCGTCAGCCTACCGCTGCCCCTGGCCCAGATCGAGTGGATCCTGGCCCTGTTCG GGCCGAGGTACGACATCTTCGGCGCGCTCGACACCCTGCTCCGGGTGCTGAGGACCCTACTCGCGGTCCCGTCGAACGCG TCCGTCGTCCTGTCCGCGCTGCTCCCGACGCTCCCGTACCTCCTCCCGGTCCCGCCGTGGCTCGAGCGCGACGTCGACGG GTTCCACCTCGATCCGCTCCTCCGACAGACCGTGGTCCCCGGTCAGCCTCCCCAGAGTCGCCCTCAGGAAGCGGGTGCTC GGGTAGTACCTGCCCCTCATGATCGGGGACCCCAGGGGATCCCCGGGCGGCGGGTGAGGTCCACGGGCACTTATCCGTGT CGGCGTTTCCTACGTCCCGTTTGA
Upstream 100 bases:
>100_bases ACACGGGGCTACCGCTCCCCCTCGTCGGCGCCCTCGCCTGGCTCCTCCAGTGGGCCTTCGACGAGAACGAGCTGACGACG TTCAACGTCCCGCCCAACTA
Downstream 100 bases:
>100_bases TGTTTCCGTCTAGGGGTCGAGCCCAGCCCGCGGGCGATTGGGGCCCGTTCGTAAGAGTACAACGTGTGAGGCGCGAGAAG TTGACGTTTCATTGTCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSPTATRPLETADLVPGTRARGPRHVAEVRAHGAVVVSLPLPLAQIEWILALFGPRYDIFGALDTLLRVLRTLLAVPSNA SVVLSALLPTLPYLLPVPPWLERDVDGFHLDPLLRQTVVPGQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPC RRFLRPV
Sequences:
>Translated_167_residues MSPTATRPLETADLVPGTRARGPRHVAEVRAHGAVVVSLPLPLAQIEWILALFGPRYDIFGALDTLLRVLRTLLAVPSNA SVVLSALLPTLPYLLPVPPWLERDVDGFHLDPLLRQTVVPGQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPC RRFLRPV >Mature_166_residues SPTATRPLETADLVPGTRARGPRHVAEVRAHGAVVVSLPLPLAQIEWILALFGPRYDIFGALDTLLRVLRTLLAVPSNAS VVLSALLPTLPYLLPVPPWLERDVDGFHLDPLLRQTVVPGQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPCR RFLRPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18209; Mature: 18077
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTATRPLETADLVPGTRARGPRHVAEVRAHGAVVVSLPLPLAQIEWILALFGPRYDIF CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCHHHH GALDTLLRVLRTLLAVPSNASVVLSALLPTLPYLLPVPPWLERDVDGFHLDPLLRQTVVP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHCCC GQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPCRRFLRPV CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure SPTATRPLETADLVPGTRARGPRHVAEVRAHGAVVVSLPLPLAQIEWILALFGPRYDIF CCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHCCCHHHH GALDTLLRVLRTLLAVPSNASVVLSALLPTLPYLLPVPPWLERDVDGFHLDPLLRQTVVP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHCCC GQPPQSRPQEAGARVVPAPHDRGPQGIPGRRVRSTGTYPCRRFLRPV CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA