| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094770
Identifier: 20094770
GI number: 20094770
Start: 1352753
End: 1353799
Strand: Reverse
Name: 20094770
Synonym: MK1334
Alternate gene names: NA
Gene position: 1353799-1352753 (Counterclockwise)
Preceding gene: 20094771
Following gene: 20094767
Centisome position: 79.87
GC content: 72.4
Gene sequence:
>1047_bases ATGAGGGCCCGGACCCACGTCCTGCTCACCTACCTGCTGACCGCCCCGTTCCTGGGCGTGGAACGGGCGATCACCGCGTC CCTCTCGGCGATACTACCCGACCTCGACCACCCGAACTCCCTGGTCTCCTCGGCCCTCTACCCGCTCGAGCTCCTCACGG GCCGGGACCTCAGGCTGGCGCTCTCCCGGAGGCTCAGGCACCGCGGGATCCTCCACTGCCCCTGGCCGTGGGGCGCGCTC GCCTACCTCCTCTGGGCGACCGGGCACCCGAACGCCGCGCTCGTGCCCCTGGGAGGGTTCCTCCACTGCCTCGAGGACGC GTTCACGACGATGGGCGTACCGGTCATGTGGAGGCGGGAGGGCGGCTCGTGGCGCTCGGTCAGGCTCTCGCTCACGGGGC TGCCGTCCGACACCTGGGACGCGATCCTGCCGCCGCTCGCCCTGGCCGTCACCTGGGCGCTGTTCCTGCTGAACCCGGCC GAGTTCCACGCGACCCACCTCGACGAGAACCCGTACCTGGAGCGCGCGTACTGGACCTCGCGGGCGGTCCTCCTGAGACC CTTCCTGCACACGGTGGAGGGGCTGAACCGGGAGGCGCTCCGGGTTTCCGGGTACGGCCGGCTCCCGCACGTGCGGGCCG TCCTCCGGTACGATTACGGCCCCCGGGAGGTCTCGGGGCTCTGGACCCCGGCGGGCTGGGTCCGCGGGGACGACGGGCGC TGGTACCCGCCGCCCACGCACGGGTACTCCCTGCGGTCCCTCTCCTACGAGCGGGCGGCGTACCGGGTGGGGACGGTGCG GTGCTGGGATGCCCCCGAGGGTGCGCTGGTGCTCCGCGCGGTGCTGGCGTACGAGGGTCTGAGCCCGGTCGCGCTCGAGA GGTTGGCCAGGGAGGCCGTGCTCCTCGGGTTCAGGGTCCGGCACACGGACCGGGTCGGCGGTCACCTGGTCCTGGAGGGT GGGGGACTCGCGATCCCGGTCCTGCACAGGCTCCCGAGACCCGCCTGGTGTCGGGTCACCTTTCTGCCCTCGAGATCGTT ACGGTAA
Upstream 100 bases:
>100_bases CTCCTGATCCTCCGGACGACCGTGGACGAGAGCGTGGACTTCTGGGCGCTCACGGCCCTCGGACTCGCCGGCCTCGCCGT CTCCAAGCTGGGGTGAGACG
Downstream 100 bases:
>100_bases TCGTAACTATCCTTCGAGGGAGGGCGGGCGCCCGTCACCACACCCCCGTTAGCGCGTTCTCCGCCAGTGCTCCGAGTACG GCGAGCACGGGGGCGAGTAC
Product: membrane-bound metal-dependent hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRARTHVLLTYLLTAPFLGVERAITASLSAILPDLDHPNSLVSSALYPLELLTGRDLRLALSRRLRHRGILHCPWPWGAL AYLLWATGHPNAALVPLGGFLHCLEDAFTTMGVPVMWRREGGSWRSVRLSLTGLPSDTWDAILPPLALAVTWALFLLNPA EFHATHLDENPYLERAYWTSRAVLLRPFLHTVEGLNREALRVSGYGRLPHVRAVLRYDYGPREVSGLWTPAGWVRGDDGR WYPPPTHGYSLRSLSYERAAYRVGTVRCWDAPEGALVLRAVLAYEGLSPVALERLAREAVLLGFRVRHTDRVGGHLVLEG GGLAIPVLHRLPRPAWCRVTFLPSRSLR
Sequences:
>Translated_348_residues MRARTHVLLTYLLTAPFLGVERAITASLSAILPDLDHPNSLVSSALYPLELLTGRDLRLALSRRLRHRGILHCPWPWGAL AYLLWATGHPNAALVPLGGFLHCLEDAFTTMGVPVMWRREGGSWRSVRLSLTGLPSDTWDAILPPLALAVTWALFLLNPA EFHATHLDENPYLERAYWTSRAVLLRPFLHTVEGLNREALRVSGYGRLPHVRAVLRYDYGPREVSGLWTPAGWVRGDDGR WYPPPTHGYSLRSLSYERAAYRVGTVRCWDAPEGALVLRAVLAYEGLSPVALERLAREAVLLGFRVRHTDRVGGHLVLEG GGLAIPVLHRLPRPAWCRVTFLPSRSLR >Mature_348_residues MRARTHVLLTYLLTAPFLGVERAITASLSAILPDLDHPNSLVSSALYPLELLTGRDLRLALSRRLRHRGILHCPWPWGAL AYLLWATGHPNAALVPLGGFLHCLEDAFTTMGVPVMWRREGGSWRSVRLSLTGLPSDTWDAILPPLALAVTWALFLLNPA EFHATHLDENPYLERAYWTSRAVLLRPFLHTVEGLNREALRVSGYGRLPHVRAVLRYDYGPREVSGLWTPAGWVRGDDGR WYPPPTHGYSLRSLSYERAAYRVGTVRCWDAPEGALVLRAVLAYEGLSPVALERLAREAVLLGFRVRHTDRVGGHLVLEG GGLAIPVLHRLPRPAWCRVTFLPSRSLR
Specific function: Unknown
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38959; Mature: 38959
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARTHVLLTYLLTAPFLGVERAITASLSAILPDLDHPNSLVSSALYPLELLTGRDLRLA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHCCCCHHHH LSRRLRHRGILHCPWPWGALAYLLWATGHPNAALVPLGGFLHCLEDAFTTMGVPVMWRRE HHHHHHHCCEEECCCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEC GGSWRSVRLSLTGLPSDTWDAILPPLALAVTWALFLLNPAEFHATHLDENPYLERAYWTS CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCHHHHHHHH RAVLLRPFLHTVEGLNREALRVSGYGRLPHVRAVLRYDYGPREVSGLWTPAGWVRGDDGR HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCC WYPPPTHGYSLRSLSYERAAYRVGTVRCWDAPEGALVLRAVLAYEGLSPVALERLAREAV CCCCCCCCCCHHHCCHHHHHEEECEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH LLGFRVRHTDRVGGHLVLEGGGLAIPVLHRLPRPAWCRVTFLPSRSLR HHHEEEEECCCCCCEEEEECCCEEEHHHHHCCCCCEEEEEECCCCCCC >Mature Secondary Structure MRARTHVLLTYLLTAPFLGVERAITASLSAILPDLDHPNSLVSSALYPLELLTGRDLRLA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHCCCCHHHH LSRRLRHRGILHCPWPWGALAYLLWATGHPNAALVPLGGFLHCLEDAFTTMGVPVMWRRE HHHHHHHCCEEECCCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEC GGSWRSVRLSLTGLPSDTWDAILPPLALAVTWALFLLNPAEFHATHLDENPYLERAYWTS CCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCCCCHHHHHHHH RAVLLRPFLHTVEGLNREALRVSGYGRLPHVRAVLRYDYGPREVSGLWTPAGWVRGDDGR HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCC WYPPPTHGYSLRSLSYERAAYRVGTVRCWDAPEGALVLRAVLAYEGLSPVALERLAREAV CCCCCCCCCCHHHCCHHHHHEEECEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH LLGFRVRHTDRVGGHLVLEGGGLAIPVLHRLPRPAWCRVTFLPSRSLR HHHEEEEECCCCCCEEEEECCCEEEHHHHHCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA