Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094767

Identifier: 20094767

GI number: 20094767

Start: 1349240

End: 1350568

Strand: Reverse

Name: 20094767

Synonym: MK1331

Alternate gene names: NA

Gene position: 1350568-1349240 (Counterclockwise)

Preceding gene: 20094770

Following gene: 20094766

Centisome position: 79.68

GC content: 64.79

Gene sequence:

>1329_bases
GTGAGACGTGTCCTTTCGCCGGCGATCGTCCCGATCGTCGTCTTGGTTCTACCGTTACCCGTTCACGGTGACTCGTGGAC
GGATCCGGAGGCGCTGCTGGACGTGGGCGTGCAGAGCCACCTCGTCATCGAGGACGTCCACGAGAAGGAGGTGACCACGG
AGCACGGTGATACCGTGAAGGTCCTCGACTACGTGGACGCGACGTACATGGCGGTTATCAAGGCCAAGGAGCCCGGGAAG
CCGGTGACGGTGCACGTGCTCCTACCGCAGGGTACGGAGGTGCTCGAGGCCAGGTTCTACCCGAAGGTCTCGGACCGGAG
TCCGTCGGAGGTCCTGAGCGATCCGTCGAGGTTCGAGAGCGTGAAGGTGAAACCCAAGGGTCAGACCGAGGTCACGTGGG
AGTTCCTAGATGAGACCTGGAAGTGGACCCAGCTCGACTTCGAGGTGACGCCGGAGCACGACCCCGGGAAGCCGTTCTCC
TACTCGCTACTGGTCCTGAAGCTCAGGATCCCGGCGCTGCACCGGGTACCGAACCTCCGGATGTACTACCCGAAGCACTA
CGACGATGCGTTACGATCGGAGTACTCCTACGGTGTCATCGAATGGCCGATCCCGGCGCAGCCGGGCTACGACAACAGCT
TCTACGTCAGGAGCGGCTCCGAGACGTTGGACGTGGGTGTCGAGCTCTTCGCGTGGCCGGAGGGCGTCGTCACTAAATCC
TCGGCCGCGCCGGGCTGGGACACCTGTCAAGCTCGCCTCACGGACCACCTGATGCTGGTGTTCCCGGAGGCTCGGGTGGC
CGTGCTCGCCGACGTTTCACCGGCGGAGGATTACGAGAAGTGGAAGCACCAGCGTGAGGAGGTCATCGAGAAGGAGTGGC
CGCAGGTCACCCAGAGGTTCGGGTTCCCGTACGTGCCCGTGGTCGCGGTGATCGGCGTGGAACGGGTGGAGGTGAGCTTC
GACCTGCTGGTACCGGAGCGCGTGGACGCGGGTTCCACGGTGACCGTCTTCGTCCGGCCGTACCCGGAGCCGTGGTCCTA
CGCACCGGAAGAGGGCGTCCTGAGGTTCGAGCTGAGGGACGAGCACGGGTCGGTCATGGAGCTGGGCGAGGTGAAGTTAC
CCGAGGGAAGCGGCTTCGAGGGATGGGTGGAGTTCCGGTTCCGCGCGCCGGAGAAGCCCGGTTATTACACCCTATTCGTG
GAGTACGAGGGTCCGTACGGTAACGGGAAGACCTCGGCGACGTTCCGCGTGGAGGGACGCGGCAAGAGGTGCAAGCTCCC
GATCCCGGTGGTCCCGGTGATCCCACCGAGGCGCCGGGCCCGAGCCTGA

Upstream 100 bases:

>100_bases
TCCCGGGTACACATCACGCTGGAAGACCCACGACCCCGGAGATGAGTTACCGAAAACTTTAGTGTCGGAGCTTCCGACGA
TCCACTTCGGGGGTGAGAAC

Downstream 100 bases:

>100_bases
TCTCCCCCCTCGCGCCCCGGTTCGCTCTTTCGGAAACCGTAAACATGATCACGAAGCATTATCTTTTCCCGAATTGAGGT
CAACGGGTCGGGAGTTAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MRRVLSPAIVPIVVLVLPLPVHGDSWTDPEALLDVGVQSHLVIEDVHEKEVTTEHGDTVKVLDYVDATYMAVIKAKEPGK
PVTVHVLLPQGTEVLEARFYPKVSDRSPSEVLSDPSRFESVKVKPKGQTEVTWEFLDETWKWTQLDFEVTPEHDPGKPFS
YSLLVLKLRIPALHRVPNLRMYYPKHYDDALRSEYSYGVIEWPIPAQPGYDNSFYVRSGSETLDVGVELFAWPEGVVTKS
SAAPGWDTCQARLTDHLMLVFPEARVAVLADVSPAEDYEKWKHQREEVIEKEWPQVTQRFGFPYVPVVAVIGVERVEVSF
DLLVPERVDAGSTVTVFVRPYPEPWSYAPEEGVLRFELRDEHGSVMELGEVKLPEGSGFEGWVEFRFRAPEKPGYYTLFV
EYEGPYGNGKTSATFRVEGRGKRCKLPIPVVPVIPPRRRARA

Sequences:

>Translated_442_residues
MRRVLSPAIVPIVVLVLPLPVHGDSWTDPEALLDVGVQSHLVIEDVHEKEVTTEHGDTVKVLDYVDATYMAVIKAKEPGK
PVTVHVLLPQGTEVLEARFYPKVSDRSPSEVLSDPSRFESVKVKPKGQTEVTWEFLDETWKWTQLDFEVTPEHDPGKPFS
YSLLVLKLRIPALHRVPNLRMYYPKHYDDALRSEYSYGVIEWPIPAQPGYDNSFYVRSGSETLDVGVELFAWPEGVVTKS
SAAPGWDTCQARLTDHLMLVFPEARVAVLADVSPAEDYEKWKHQREEVIEKEWPQVTQRFGFPYVPVVAVIGVERVEVSF
DLLVPERVDAGSTVTVFVRPYPEPWSYAPEEGVLRFELRDEHGSVMELGEVKLPEGSGFEGWVEFRFRAPEKPGYYTLFV
EYEGPYGNGKTSATFRVEGRGKRCKLPIPVVPVIPPRRRARA
>Mature_442_residues
MRRVLSPAIVPIVVLVLPLPVHGDSWTDPEALLDVGVQSHLVIEDVHEKEVTTEHGDTVKVLDYVDATYMAVIKAKEPGK
PVTVHVLLPQGTEVLEARFYPKVSDRSPSEVLSDPSRFESVKVKPKGQTEVTWEFLDETWKWTQLDFEVTPEHDPGKPFS
YSLLVLKLRIPALHRVPNLRMYYPKHYDDALRSEYSYGVIEWPIPAQPGYDNSFYVRSGSETLDVGVELFAWPEGVVTKS
SAAPGWDTCQARLTDHLMLVFPEARVAVLADVSPAEDYEKWKHQREEVIEKEWPQVTQRFGFPYVPVVAVIGVERVEVSF
DLLVPERVDAGSTVTVFVRPYPEPWSYAPEEGVLRFELRDEHGSVMELGEVKLPEGSGFEGWVEFRFRAPEKPGYYTLFV
EYEGPYGNGKTSATFRVEGRGKRCKLPIPVVPVIPPRRRARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50141; Mature: 50141

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVLSPAIVPIVVLVLPLPVHGDSWTDPEALLDVGVQSHLVIEDVHEKEVTTEHGDTVK
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCHHCCCCCCCEEE
VLDYVDATYMAVIKAKEPGKPVTVHVLLPQGTEVLEARFYPKVSDRSPSEVLSDPSRFES
EEEHHCCEEEEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHCCCCHHCE
VKVKPKGQTEVTWEFLDETWKWTQLDFEVTPEHDPGKPFSYSLLVLKLRIPALHRVPNLR
EEECCCCCCEEEHEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCHHHCCCCCE
MYYPKHYDDALRSEYSYGVIEWPIPAQPGYDNSFYVRSGSETLDVGVELFAWPEGVVTKS
EECCCCHHHHHHCCCCCCEEECCCCCCCCCCCEEEEECCCCEEECCEEEEECCCCCEECC
SAAPGWDTCQARLTDHLMLVFPEARVAVLADVSPAEDYEKWKHQREEVIEKEWPQVTQRF
CCCCCHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GFPYVPVVAVIGVERVEVSFDLLVPERVDAGSTVTVFVRPYPEPWSYAPEEGVLRFELRD
CCCHHHHHHHHCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEC
EHGSVMELGEVKLPEGSGFEGWVEFRFRAPEKPGYYTLFVEYEGPYGNGKTSATFRVEGR
CCCCEEEECCEECCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCC
GKRCKLPIPVVPVIPPRRRARA
CCEEECCCCEECCCCCHHHCCC
>Mature Secondary Structure
MRRVLSPAIVPIVVLVLPLPVHGDSWTDPEALLDVGVQSHLVIEDVHEKEVTTEHGDTVK
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCHHCCCCCCCEEE
VLDYVDATYMAVIKAKEPGKPVTVHVLLPQGTEVLEARFYPKVSDRSPSEVLSDPSRFES
EEEHHCCEEEEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHCCCCHHCE
VKVKPKGQTEVTWEFLDETWKWTQLDFEVTPEHDPGKPFSYSLLVLKLRIPALHRVPNLR
EEECCCCCCEEEHEECCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCHHHCCCCCE
MYYPKHYDDALRSEYSYGVIEWPIPAQPGYDNSFYVRSGSETLDVGVELFAWPEGVVTKS
EECCCCHHHHHHCCCCCCEEECCCCCCCCCCCEEEEECCCCEEECCEEEEECCCCCEECC
SAAPGWDTCQARLTDHLMLVFPEARVAVLADVSPAEDYEKWKHQREEVIEKEWPQVTQRF
CCCCCHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GFPYVPVVAVIGVERVEVSFDLLVPERVDAGSTVTVFVRPYPEPWSYAPEEGVLRFELRD
CCCHHHHHHHHCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEC
EHGSVMELGEVKLPEGSGFEGWVEFRFRAPEKPGYYTLFVEYEGPYGNGKTSATFRVEGR
CCCCEEEECCEECCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCC
GKRCKLPIPVVPVIPPRRRARA
CCEEECCCCEECCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA