Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094740

Identifier: 20094740

GI number: 20094740

Start: 1313373

End: 1314599

Strand: Reverse

Name: 20094740

Synonym: MK1304

Alternate gene names: NA

Gene position: 1314599-1313373 (Counterclockwise)

Preceding gene: 20094741

Following gene: 20094739

Centisome position: 77.56

GC content: 63.49

Gene sequence:

>1227_bases
ATGAAAGTCACCACCAGGACGACCCGCGGGATGGAACCGCCGGTACCGCCGCGTTTCGTATCGACACGCACCGGCACCGC
CCGGCCACCGTATACTTATCGTAAGGCTTATACCGCCGGGAGAATCCGTGGTTCCGCCGGCGTCGAGGGGGCACCCGATA
TCGGGGAGCGCTCGACGCTCCTCGCCCTGCGATGGCTCGAACTGTTCTCCGACGTCTGGATAGTGATCCTCGGCCTGACG
ACGGCGATCGTGTTCTTCGTCTTCGGTCTCCTCCCCTCACTGCTCTTGCTATTCGTACTGCTGCTAATATCGGCACCGAT
GACCGCACCCGTACGGTTCGTACTCTCGACGATACCACTGATCGTCGTCCTATGGTCGGCGAGACTGGCGGATCGTGAGG
TGATCGTACTCTCAGTGATACTACTGATCGCCGCGCTCTGGTCGGCGAGATCGGCGGGGCGTAAGGTGGTCCGCGAGGCG
TCGAGGATCGTGGAGGAGGCCGAAGACATCGTCGGTGTCGTCTTCAGAGCCGAAGGTACTCCGGACAAGCTCGACCGCAG
GCTCTCCGGACTCCTGAAGGTGCCGGACCGCGACCTCTCGGGAGGGAAGGGAACCCAGTTCGTAGTGGGAAGTAGGGGTT
ACATCAAAGGGTGTAGGGGTGCGCTGAGGGAAGCCCTGAAGATCGTGGGTTCCGGGGACGCCCTGCGCGAATTCGCCGAG
GAAGGTAGCCTCGTGACCTTCCACGTGACGCTCGTGATACCTCCAACGAGCCGGTACGAGTTCAAGACCGAGCACGACCT
CCGCGGTATCGCGATCCCGCTCGGCCGCAGGTCGGAGGACCGCGCCCCGATTGTCGCCCTGCTGGGGGTCGGTCGCCGCG
GTTCAGCAGAAGATTGGACGCTCGCCTTCGGCGGCGTGGTCCCGCTCGGGGAGACGTTCTCCGAGCTCCACCCACACGAG
GGTAGGACCGACGACGGACACGGGTCCCGACGGCACCGGGACCATGACGGTGACCATAACGGTTGGTGCGCAGGGGGCGA
TGGCCTCGGGGATTATCACTGGTGGGATTCCGATGAGTCCGGTGGCATCTTCGAGAGTATCGTGGATAGCATCGCTGAAA
TCGCCGAATCGATGGAAGGGGGCTGGGGAAATGGTGGCTGGTTCGGCGACGGAGGAGACTGGGGCGATGGTGGTAACGGT
GGTGACGGTGGGAACGGGGGCTGCTGA

Upstream 100 bases:

>100_bases
CGTACCGGGTGCTCTCCTACAACAACTTCGTTTCCTACGTGATCGAGGTCCAGCGACACGGAGGTGAAGAGGTCCGCCCA
CGGGACCCGACCATCCGGGG

Downstream 100 bases:

>100_bases
CCGTGGCGGAGATACCCTCCGGTCGGGGGTTCCGGTCCTACACCGGGCGATCCGGCTTCCCGGTTCACCACACGACGTCC
ACGTTGCGAAAAACAGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MKVTTRTTRGMEPPVPPRFVSTRTGTARPPYTYRKAYTAGRIRGSAGVEGAPDIGERSTLLALRWLELFSDVWIVILGLT
TAIVFFVFGLLPSLLLLFVLLLISAPMTAPVRFVLSTIPLIVVLWSARLADREVIVLSVILLIAALWSARSAGRKVVREA
SRIVEEAEDIVGVVFRAEGTPDKLDRRLSGLLKVPDRDLSGGKGTQFVVGSRGYIKGCRGALREALKIVGSGDALREFAE
EGSLVTFHVTLVIPPTSRYEFKTEHDLRGIAIPLGRRSEDRAPIVALLGVGRRGSAEDWTLAFGGVVPLGETFSELHPHE
GRTDDGHGSRRHRDHDGDHNGWCAGGDGLGDYHWWDSDESGGIFESIVDSIAEIAESMEGGWGNGGWFGDGGDWGDGGNG
GDGGNGGC

Sequences:

>Translated_408_residues
MKVTTRTTRGMEPPVPPRFVSTRTGTARPPYTYRKAYTAGRIRGSAGVEGAPDIGERSTLLALRWLELFSDVWIVILGLT
TAIVFFVFGLLPSLLLLFVLLLISAPMTAPVRFVLSTIPLIVVLWSARLADREVIVLSVILLIAALWSARSAGRKVVREA
SRIVEEAEDIVGVVFRAEGTPDKLDRRLSGLLKVPDRDLSGGKGTQFVVGSRGYIKGCRGALREALKIVGSGDALREFAE
EGSLVTFHVTLVIPPTSRYEFKTEHDLRGIAIPLGRRSEDRAPIVALLGVGRRGSAEDWTLAFGGVVPLGETFSELHPHE
GRTDDGHGSRRHRDHDGDHNGWCAGGDGLGDYHWWDSDESGGIFESIVDSIAEIAESMEGGWGNGGWFGDGGDWGDGGNG
GDGGNGGC
>Mature_408_residues
MKVTTRTTRGMEPPVPPRFVSTRTGTARPPYTYRKAYTAGRIRGSAGVEGAPDIGERSTLLALRWLELFSDVWIVILGLT
TAIVFFVFGLLPSLLLLFVLLLISAPMTAPVRFVLSTIPLIVVLWSARLADREVIVLSVILLIAALWSARSAGRKVVREA
SRIVEEAEDIVGVVFRAEGTPDKLDRRLSGLLKVPDRDLSGGKGTQFVVGSRGYIKGCRGALREALKIVGSGDALREFAE
EGSLVTFHVTLVIPPTSRYEFKTEHDLRGIAIPLGRRSEDRAPIVALLGVGRRGSAEDWTLAFGGVVPLGETFSELHPHE
GRTDDGHGSRRHRDHDGDHNGWCAGGDGLGDYHWWDSDESGGIFESIVDSIAEIAESMEGGWGNGGWFGDGGDWGDGGNG
GDGGNGGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43925; Mature: 43925

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTTRTTRGMEPPVPPRFVSTRTGTARPPYTYRKAYTAGRIRGSAGVEGAPDIGERSTL
CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
LALRWLELFSDVWIVILGLTTAIVFFVFGLLPSLLLLFVLLLISAPMTAPVRFVLSTIPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IVVLWSARLADREVIVLSVILLIAALWSARSAGRKVVREASRIVEEAEDIVGVVFRAEGT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
PDKLDRRLSGLLKVPDRDLSGGKGTQFVVGSRGYIKGCRGALREALKIVGSGDALREFAE
HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
EGSLVTFHVTLVIPPTSRYEFKTEHDLRGIAIPLGRRSEDRAPIVALLGVGRRGSAEDWT
CCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCEE
LAFGGVVPLGETFSELHPHEGRTDDGHGSRRHRDHDGDHNGWCAGGDGLGDYHWWDSDES
EEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
GGIFESIVDSIAEIAESMEGGWGNGGWFGDGGDWGDGGNGGDGGNGGC
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVTTRTTRGMEPPVPPRFVSTRTGTARPPYTYRKAYTAGRIRGSAGVEGAPDIGERSTL
CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
LALRWLELFSDVWIVILGLTTAIVFFVFGLLPSLLLLFVLLLISAPMTAPVRFVLSTIPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IVVLWSARLADREVIVLSVILLIAALWSARSAGRKVVREASRIVEEAEDIVGVVFRAEGT
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
PDKLDRRLSGLLKVPDRDLSGGKGTQFVVGSRGYIKGCRGALREALKIVGSGDALREFAE
HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
EGSLVTFHVTLVIPPTSRYEFKTEHDLRGIAIPLGRRSEDRAPIVALLGVGRRGSAEDWT
CCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCEE
LAFGGVVPLGETFSELHPHEGRTDDGHGSRRHRDHDGDHNGWCAGGDGLGDYHWWDSDES
EEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
GGIFESIVDSIAEIAESMEGGWGNGGWFGDGGDWGDGGNGGDGGNGGC
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA