Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094739

Identifier: 20094739

GI number: 20094739

Start: 1312185

End: 1313237

Strand: Reverse

Name: 20094739

Synonym: MK1303

Alternate gene names: NA

Gene position: 1313237-1312185 (Counterclockwise)

Preceding gene: 20094740

Following gene: 20094737

Centisome position: 77.48

GC content: 63.82

Gene sequence:

>1053_bases
GTGAGGGTGCGGTGGGTCCTCCTACCGGCCCTGTTGGCGCTGGTCCTACCGTTGCCCGTTCACGGTGACGCTTGGGTGGG
TCCGGAGGCGCTCCTGGACGTGGGCGTGCAGAGCGACCTGATAATCGAGGACGTCCACTTGAAGGAATCCGATCACGGAG
TCGAAGTCGTCGACCACGTGGACGCGGAGTACCGCGCGTACATCAGGGTTAAGGAGCCCGGGAAGCCGGTGACGCTGCAC
GTGCTCCTACCGCAGGGCACGGAGGTGCTCGAGGCCAGGTTCTATCCCGAATTATACCCGATCGAGGGGATCGATTTGGA
CAGCCCCGATGTCAACGTCAAGTGGGAACGGATCGAGCCCGTGAGCCGCTCGGAGGTCACGTGGAAAGTGCTCGGCTGGA
CCTGGAGGTGGACCCAACTCGACTTCCGGGTGACGCCTAAGTACGACGAGCGGAGGCACGGTTGCTCCGCCCTGGTCCTG
AAGCTCAGGATACCGACCGCCCACAGGGAGCCCGAAGAGATCGATAGACTACCGATCGCGGGACCGAAACACTACCCAGA
GCTAGGATCTTACTACTATTTCGGGTGCATCGAGTGGCCCGCGCCGCTACAGCCTTCAGGACGGGGAGGCGGATTCAACT
GTTGGGCGACATCGGACGCTTGGAGTCCGCACGTCCTGTTCCTGTGGCCCGGTGGGTTCGCCGACATCCAAGAGGGTTTC
ACGAACGTGTCGCTCACGGACCACTTGGTACTGACGCTCGGAGGAAGTGGTGGAGGGAGTGGCGCCGCCGTCGATGTCGT
CGGTGTGCGGGAGGAAGGGGAACGGGTCGTGCAGTCGGAGTGGCCGCGGGTCACCGGGAGGTTCGGGTTCCCGTACGTGC
CCGTGGTCGCGGTGATCGGGTTGGAGAAGAAGGAGCCTTCGAGTCCGAAGACGGGTCGGAAACCCGAGCGGGAGAAACCG
GCGAAGCACGAGCTACCGGTTCCGCCGATAGTGCCGCCGCCGATGCGAGGGAGACGCCGCCTCACGGGTAAAGCGTCCAA
CTCTTCCCCATAG

Upstream 100 bases:

>100_bases
TCCTACACCGGGCGATCCGGCTTCCCGGTTCACCACACGACGTCCACGTTGCGAAAAACAGTAATCCCGCACCGCCGCAC
TCCCATCGCGGGGCCTCCGC

Downstream 100 bases:

>100_bases
CCTTCCGGACGCCCTTCAGGTTTCCCCTCTCCTTCCTCCGCCCCGCGAACGCCGTCACCACGGGCACGAACTCACCGTTC
TTCAGGCGCTTGACCTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MRVRWVLLPALLALVLPLPVHGDAWVGPEALLDVGVQSDLIIEDVHLKESDHGVEVVDHVDAEYRAYIRVKEPGKPVTLH
VLLPQGTEVLEARFYPELYPIEGIDLDSPDVNVKWERIEPVSRSEVTWKVLGWTWRWTQLDFRVTPKYDERRHGCSALVL
KLRIPTAHREPEEIDRLPIAGPKHYPELGSYYYFGCIEWPAPLQPSGRGGGFNCWATSDAWSPHVLFLWPGGFADIQEGF
TNVSLTDHLVLTLGGSGGGSGAAVDVVGVREEGERVVQSEWPRVTGRFGFPYVPVVAVIGLEKKEPSSPKTGRKPEREKP
AKHELPVPPIVPPPMRGRRRLTGKASNSSP

Sequences:

>Translated_350_residues
MRVRWVLLPALLALVLPLPVHGDAWVGPEALLDVGVQSDLIIEDVHLKESDHGVEVVDHVDAEYRAYIRVKEPGKPVTLH
VLLPQGTEVLEARFYPELYPIEGIDLDSPDVNVKWERIEPVSRSEVTWKVLGWTWRWTQLDFRVTPKYDERRHGCSALVL
KLRIPTAHREPEEIDRLPIAGPKHYPELGSYYYFGCIEWPAPLQPSGRGGGFNCWATSDAWSPHVLFLWPGGFADIQEGF
TNVSLTDHLVLTLGGSGGGSGAAVDVVGVREEGERVVQSEWPRVTGRFGFPYVPVVAVIGLEKKEPSSPKTGRKPEREKP
AKHELPVPPIVPPPMRGRRRLTGKASNSSP
>Mature_350_residues
MRVRWVLLPALLALVLPLPVHGDAWVGPEALLDVGVQSDLIIEDVHLKESDHGVEVVDHVDAEYRAYIRVKEPGKPVTLH
VLLPQGTEVLEARFYPELYPIEGIDLDSPDVNVKWERIEPVSRSEVTWKVLGWTWRWTQLDFRVTPKYDERRHGCSALVL
KLRIPTAHREPEEIDRLPIAGPKHYPELGSYYYFGCIEWPAPLQPSGRGGGFNCWATSDAWSPHVLFLWPGGFADIQEGF
TNVSLTDHLVLTLGGSGGGSGAAVDVVGVREEGERVVQSEWPRVTGRFGFPYVPVVAVIGLEKKEPSSPKTGRKPEREKP
AKHELPVPPIVPPPMRGRRRLTGKASNSSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39027; Mature: 39027

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVRWVLLPALLALVLPLPVHGDAWVGPEALLDVGVQSDLIIEDVHLKESDHGVEVVDHV
CEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCEEEECC
DAEYRAYIRVKEPGKPVTLHVLLPQGTEVLEARFYPELYPIEGIDLDSPDVNVKWERIEP
CCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEHCCCC
VSRSEVTWKVLGWTWRWTQLDFRVTPKYDERRHGCSALVLKLRIPTAHREPEEIDRLPIA
CCCCCEEEEEEEEEEEEEEEEEEECCCHHHHHCCCEEEEEEEECCCCCCCHHHHHCCCCC
GPKHYPELGSYYYFGCIEWPAPLQPSGRGGGFNCWATSDAWSPHVLFLWPGGFADIQEGF
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHCC
TNVSLTDHLVLTLGGSGGGSGAAVDVVGVREEGERVVQSEWPRVTGRFGFPYVPVVAVIG
CCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHCCCEEECCCCCCHHHHHHEEC
LEKKEPSSPKTGRKPEREKPAKHELPVPPIVPPPMRGRRRLTGKASNSSP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MRVRWVLLPALLALVLPLPVHGDAWVGPEALLDVGVQSDLIIEDVHLKESDHGVEVVDHV
CEEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCEEEECC
DAEYRAYIRVKEPGKPVTLHVLLPQGTEVLEARFYPELYPIEGIDLDSPDVNVKWERIEP
CCCEEEEEEEECCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEHCCCC
VSRSEVTWKVLGWTWRWTQLDFRVTPKYDERRHGCSALVLKLRIPTAHREPEEIDRLPIA
CCCCCEEEEEEEEEEEEEEEEEEECCCHHHHHCCCEEEEEEEECCCCCCCHHHHHCCCCC
GPKHYPELGSYYYFGCIEWPAPLQPSGRGGGFNCWATSDAWSPHVLFLWPGGFADIQEGF
CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHCC
TNVSLTDHLVLTLGGSGGGSGAAVDVVGVREEGERVVQSEWPRVTGRFGFPYVPVVAVIG
CCCEEEEEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHCCCEEECCCCCCHHHHHHEEC
LEKKEPSSPKTGRKPEREKPAKHELPVPPIVPPPMRGRRRLTGKASNSSP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA