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The map label for this gene is rpl24p

Identifier: 20094655

GI number: 20094655

Start: 1207371

End: 1207820

Strand: Direct

Name: rpl24p

Synonym: MK1219

Alternate gene names: 20094655

Gene position: 1207371-1207820 (Clockwise)

Preceding gene: 20094654

Following gene: 20094656

Centisome position: 71.23

GC content: 60.67

Gene sequence:

>450_bases
TTGCGCTGGACGAAGTCCAGTCAGCCGAGGAAGCAGCGTAAGGCCTTCTTCAACGCCCCGCTACACAAGCGCCAGAAGCT
CATGAGCGCCACGCTCCACCCGGAGCTCAGGAAGAAGTTCAACCGTCGGAGCCTGCCGGTCCGGAGGGGAGACATGGTCA
GGATCATGCGCGGTGACTTCAAGGGTCACGAGGGCGAGGTCGTCGAGGTGGACCTGAAACGCCTACGTATCTACGTGGAG
GGTGCCACGATCGAGAGGGCGAACGGAGAGAAGGTGTACTACCCGATCCACCCCTCGAACGTGATGATCATCGAGCCGAA
CCTGGACGACCCGATGCGGCGTAAGATCATAGAGCGCTCCGGTGGCACCCCCGAGGTCGAGGCCGTACCCGAGAAGTCCG
AAGAGGAGAAGGAGGAGAAAGAGAAAGAGGAGGAAAAGTCCGAGGAGTGA

Upstream 100 bases:

>100_bases
GAGGCTCCGAGATCAGGGGCCCCGTGGCCAAGGAGGCCGCGGAGCGCTGGCCCAGGATCGGTAGCATCGCGAGCATCATC
GTCTAGGGGGGACGTCACCC

Downstream 100 bases:

>100_bases
GGGGGTGAACTCGCTTGGGTCGCGCGCGTAGTGGTCCGAAGCGTCACGTGAAGCGTCTCGCGGCCCCGTACGCCTGGCCG
ATCCCGAGGAAGGAAGGTGG

Product: 50S ribosomal protein L24P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRWTKSSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHEGEVVEVDLKRLRIYVE
GATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIERSGGTPEVEAVPEKSEEEKEEKEKEEEKSEE

Sequences:

>Translated_149_residues
MRWTKSSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHEGEVVEVDLKRLRIYVE
GATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIERSGGTPEVEAVPEKSEEEKEEKEKEEEKSEE
>Mature_149_residues
MRWTKSSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHEGEVVEVDLKRLRIYVE
GATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIERSGGTPEVEAVPEKSEEEKEEKEKEEEKSEE

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

Organism=Homo sapiens, GI4506621, Length=139, Percent_Identity=44.6043165467626, Blast_Score=104, Evalue=3e-23,
Organism=Homo sapiens, GI7705813, Length=139, Percent_Identity=44.6043165467626, Blast_Score=103, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17535693, Length=125, Percent_Identity=43.2, Blast_Score=94, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI32564329, Length=102, Percent_Identity=45.0980392156863, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17535691, Length=99, Percent_Identity=45.4545454545455, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6323376, Length=120, Percent_Identity=40.8333333333333, Blast_Score=90, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6321471, Length=120, Percent_Identity=40.8333333333333, Blast_Score=89, Evalue=3e-19,
Organism=Drosophila melanogaster, GI21357853, Length=117, Percent_Identity=50.4273504273504, Blast_Score=107, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_METKA (Q8TW19)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614502.1
- ProteinModelPortal:   Q8TW19
- SMR:   Q8TW19
- GeneID:   1477814
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1219
- NMPDR:   fig|190192.1.peg.1215
- HOGENOM:   HBG714769
- OMA:   FLYNAPL
- ProtClustDB:   PRK01191
- BioCyc:   MKAN190192:MK1219-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01326_A
- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR11143
- SMART:   SM00739
- TIGRFAMs:   TIGR01080

Pfam domain/function: PF00467 KOW; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 17581; Mature: 17581

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWTKSSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDF
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEECCC
KGHEGEVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIERS
CCCCCCEEEEEEEEEEEEECCCEEECCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHC
GGTPEVEAVPEKSEEEKEEKEKEEEKSEE
CCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRWTKSSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDF
CCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEEEECCC
KGHEGEVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIEPNLDDPMRRKIIERS
CCCCCCEEEEEEEEEEEEECCCEEECCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHC
GGTPEVEAVPEKSEEEKEEKEKEEEKSEE
CCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014