Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094609

Identifier: 20094609

GI number: 20094609

Start: 1163540

End: 1164262

Strand: Direct

Name: 20094609

Synonym: MK1173

Alternate gene names: NA

Gene position: 1163540-1164262 (Clockwise)

Preceding gene: 20094608

Following gene: 20094610

Centisome position: 68.65

GC content: 62.24

Gene sequence:

>723_bases
ATGCGGTCCTTTCCCCTCCTACCGGTGGCGCTTGTGCTACTACCCGCGGCGGCCCATGCGGGCAAAATCTCGGTCACGGT
CTACCCGGAAAGCGTGAACGTCCAGGGGAACGCGTTGGGGATCCACGAGCGGCTGGAGAAGGAACTCGACCTGATCGTGA
CCGTCACCGACCTGGGCACGGGAGCCGTCTACGACATGAAGTTCAATCCGCTCGAGCCATCGAGTCCCGCCGGTCTGGAC
GTGACGGGCCCGGTGACGGTCATCGCGACGGTCAGGTATGCCAGAAACATCGTGACCAGGTTCAACGTCTGGCCCGAGGG
TGCGAGCTCCTTCTCGAGCGTCGACGTCCCCGAGGGTCGACTCGAGACGACGGTGAACCACCCTCGGATCTCGGTACCCT
CGACGGGTACGTTCGACGTCGAGTGCCCCATCACGATGTCCCTGCGCACCGACAAGGGAACGGTTACGGTCAAGCTGTTG
CTCCACGTCTCCGGGATCGATGTGAAAGGGGTGAAAGCCGAGAGAAAGGGGGTCTTACCCGAGTTACCGTCGGTGGTGAG
ACTTATCCCCGTGGCCGTCGCGTTGGCACCTATGGTCGTGATTCCAGGCTTCATCCTCATCGACTTGACGCTGAACGTCC
TTAACGGACTGAAGTCGACTCTGGGACCCGTGCTCGACCACCTGTTCGGAGTCCTCGGAGGACTTCTGCCTCGGCCCGGG
TAG

Upstream 100 bases:

>100_bases
CCCCGTCGCCCCACGCCGTACGGGATGCGACGGTCGCCGGGTCTTCTCCCTGGGAAAAGAGGTGATAAGGGTGGACCTCG
AGCCCTCTCGGGGGAACCGG

Downstream 100 bases:

>100_bases
CGGTGATACGCTCCGACGCTGCACCCCTCGAACACTTCCACCGGGCCGATGAGGAACCTACCCCGAGGCCGAACCGTGAC
GAGGGACGGGGTGTCCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRSFPLLPVALVLLPAAAHAGKISVTVYPESVNVQGNALGIHERLEKELDLIVTVTDLGTGAVYDMKFNPLEPSSPAGLD
VTGPVTVIATVRYARNIVTRFNVWPEGASSFSSVDVPEGRLETTVNHPRISVPSTGTFDVECPITMSLRTDKGTVTVKLL
LHVSGIDVKGVKAERKGVLPELPSVVRLIPVAVALAPMVVIPGFILIDLTLNVLNGLKSTLGPVLDHLFGVLGGLLPRPG

Sequences:

>Translated_240_residues
MRSFPLLPVALVLLPAAAHAGKISVTVYPESVNVQGNALGIHERLEKELDLIVTVTDLGTGAVYDMKFNPLEPSSPAGLD
VTGPVTVIATVRYARNIVTRFNVWPEGASSFSSVDVPEGRLETTVNHPRISVPSTGTFDVECPITMSLRTDKGTVTVKLL
LHVSGIDVKGVKAERKGVLPELPSVVRLIPVAVALAPMVVIPGFILIDLTLNVLNGLKSTLGPVLDHLFGVLGGLLPRPG
>Mature_240_residues
MRSFPLLPVALVLLPAAAHAGKISVTVYPESVNVQGNALGIHERLEKELDLIVTVTDLGTGAVYDMKFNPLEPSSPAGLD
VTGPVTVIATVRYARNIVTRFNVWPEGASSFSSVDVPEGRLETTVNHPRISVPSTGTFDVECPITMSLRTDKGTVTVKLL
LHVSGIDVKGVKAERKGVLPELPSVVRLIPVAVALAPMVVIPGFILIDLTLNVLNGLKSTLGPVLDHLFGVLGGLLPRPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25400; Mature: 25400

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFPLLPVALVLLPAAAHAGKISVTVYPESVNVQGNALGIHERLEKELDLIVTVTDLGT
CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEECHHHHHHCCCEEEEEEEECCC
GAVYDMKFNPLEPSSPAGLDVTGPVTVIATVRYARNIVTRFNVWPEGASSFSSVDVPEGR
CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LETTVNHPRISVPSTGTFDVECPITMSLRTDKGTVTVKLLLHVSGIDVKGVKAERKGVLP
CEEECCCCEEECCCCCCEEEECCEEEEEECCCCEEEEEEEEEECCCCEECCCHHHCCCCC
ELPSVVRLIPVAVALAPMVVIPGFILIDLTLNVLNGLKSTLGPVLDHLFGVLGGLLPRPG
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRSFPLLPVALVLLPAAAHAGKISVTVYPESVNVQGNALGIHERLEKELDLIVTVTDLGT
CCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEECHHHHHHCCCEEEEEEEECCC
GAVYDMKFNPLEPSSPAGLDVTGPVTVIATVRYARNIVTRFNVWPEGASSFSSVDVPEGR
CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LETTVNHPRISVPSTGTFDVECPITMSLRTDKGTVTVKLLLHVSGIDVKGVKAERKGVLP
CEEECCCCEEECCCCCCEEEECCEEEEEECCCCEEEEEEEEEECCCCEECCCHHHCCCCC
ELPSVVRLIPVAVALAPMVVIPGFILIDLTLNVLNGLKSTLGPVLDHLFGVLGGLLPRPG
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA