Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20094608

Identifier: 20094608

GI number: 20094608

Start: 1162560

End: 1163432

Strand: Direct

Name: 20094608

Synonym: MK1172

Alternate gene names: NA

Gene position: 1162560-1163432 (Clockwise)

Preceding gene: 20094604

Following gene: 20094609

Centisome position: 68.59

GC content: 67.58

Gene sequence:

>873_bases
TTGGTAGCCCACCGGGGCCGTCTCTTCGTAGAAACCGACGGGAAGCTTCTGGGTTCCTGTGAGGCCTCGTTGATCGTCAC
CGAGGAGAACGTCGTCGTGGTCCCACGGGAGCCGATCGAGGGTGTCGACACCTCGGATCTCGTCGTCGAGTCCGTGGCAT
CGCGGTTCGACTCGGCCGAGCTCGAGGAGGGTAACTTCACGCCGCCCAGGTCCAGGGTGGTCATGACCCCACCCACGGCC
GCCTCGATGATCGACCTCGGACTCGCCCTGAAGCGGTTCGAGGTCGACGGCGTTACCGTCCTGACGGTCGTCGGTCCCGC
CCCGGCGTACCCGTTCGAGCGCAGGATCCTGGCTCCCGAGGGTGAGATGACGCTGCGGTTCGAGCCGAAGGATCCCGTGG
CGGCGGAGGGGAGCCTGCGGGCCGCCGCGCGCGCCGCGGTGGAGGGGACCGTCGGGGAGACCGTCGGAAGGAGTAAGGCG
GTGCGACTCTGCAAGGTCCTGGTCGAGCTGAACCAGACCGTAGGACACGGCACGCTCAGGCTCGTACCGCGGGACGAGAA
CGTCCTCCTCGTACTCCAGCCCGAGGAGGACATCGCCGAGGAGTTCAAGGACGCCGTGGGTAAGTCACAGATCGGCATCG
CGCTGACACCACCCGAACTCTCCGCGGTGTTCTCCGGCAAGGCGGTCGTGAAGCACGGGAAGGAGGACACCGTCCACGTG
CTCGACGCGCGTAAGACGATCGAGTTCCGGGCGGAGGGGAAGGGATGGGCGCTGAGGGCCGTCCCGACGGACGTGATCGC
GGGCAGCACCGCGCGGGTACTACTGCGGACCGCGGCCGAGCTGATCGTGCACGAGGGTCTCCGACCCGAGTAA

Upstream 100 bases:

>100_bases
AGTCCCGGAGTGGGCCGTGCACACGGTCGACCTCGGGAGGGTTCTCGACGACCGAAACCCCCTTTATGTTTCGAAGTTAG
GGTTCGTTCGGGGAAACCGG

Downstream 100 bases:

>100_bases
CCGATACCCCCGTCGCCCCACGCCGTACGGGATGCGACGGTCGCCGGGTCTTCTCCCTGGGAAAAGAGGTGATAAGGGTG
GACCTCGAGCCCTCTCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MVAHRGRLFVETDGKLLGSCEASLIVTEENVVVVPREPIEGVDTSDLVVESVASRFDSAELEEGNFTPPRSRVVMTPPTA
ASMIDLGLALKRFEVDGVTVLTVVGPAPAYPFERRILAPEGEMTLRFEPKDPVAAEGSLRAAARAAVEGTVGETVGRSKA
VRLCKVLVELNQTVGHGTLRLVPRDENVLLVLQPEEDIAEEFKDAVGKSQIGIALTPPELSAVFSGKAVVKHGKEDTVHV
LDARKTIEFRAEGKGWALRAVPTDVIAGSTARVLLRTAAELIVHEGLRPE

Sequences:

>Translated_290_residues
MVAHRGRLFVETDGKLLGSCEASLIVTEENVVVVPREPIEGVDTSDLVVESVASRFDSAELEEGNFTPPRSRVVMTPPTA
ASMIDLGLALKRFEVDGVTVLTVVGPAPAYPFERRILAPEGEMTLRFEPKDPVAAEGSLRAAARAAVEGTVGETVGRSKA
VRLCKVLVELNQTVGHGTLRLVPRDENVLLVLQPEEDIAEEFKDAVGKSQIGIALTPPELSAVFSGKAVVKHGKEDTVHV
LDARKTIEFRAEGKGWALRAVPTDVIAGSTARVLLRTAAELIVHEGLRPE
>Mature_290_residues
MVAHRGRLFVETDGKLLGSCEASLIVTEENVVVVPREPIEGVDTSDLVVESVASRFDSAELEEGNFTPPRSRVVMTPPTA
ASMIDLGLALKRFEVDGVTVLTVVGPAPAYPFERRILAPEGEMTLRFEPKDPVAAEGSLRAAARAAVEGTVGETVGRSKA
VRLCKVLVELNQTVGHGTLRLVPRDENVLLVLQPEEDIAEEFKDAVGKSQIGIALTPPELSAVFSGKAVVKHGKEDTVHV
LDARKTIEFRAEGKGWALRAVPTDVIAGSTARVLLRTAAELIVHEGLRPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31106; Mature: 31106

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAHRGRLFVETDGKLLGSCEASLIVTEENVVVVPREPIEGVDTSDLVVESVASRFDSAE
CCCCCCEEEEEECCCEEECCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
LEEGNFTPPRSRVVMTPPTAASMIDLGLALKRFEVDGVTVLTVVGPAPAYPFERRILAPE
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHEEEEECCEEEEEEECCCCCCCCCCEEECCC
GEMTLRFEPKDPVAAEGSLRAAARAAVEGTVGETVGRSKAVRLCKVLVELNQTVGHGTLR
CCEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCEEE
LVPRDENVLLVLQPEEDIAEEFKDAVGKSQIGIALTPPELSAVFSGKAVVKHGKEDTVHV
EEECCCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCHHHHCCCCCEEEE
LDARKTIEFRAEGKGWALRAVPTDVIAGSTARVLLRTAAELIVHEGLRPE
EECCEEEEEEECCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVAHRGRLFVETDGKLLGSCEASLIVTEENVVVVPREPIEGVDTSDLVVESVASRFDSAE
CCCCCCEEEEEECCCEEECCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCC
LEEGNFTPPRSRVVMTPPTAASMIDLGLALKRFEVDGVTVLTVVGPAPAYPFERRILAPE
CCCCCCCCCCCEEEECCCCHHHHHHHHHHHEEEEECCEEEEEEECCCCCCCCCCEEECCC
GEMTLRFEPKDPVAAEGSLRAAARAAVEGTVGETVGRSKAVRLCKVLVELNQTVGHGTLR
CCEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCEEE
LVPRDENVLLVLQPEEDIAEEFKDAVGKSQIGIALTPPELSAVFSGKAVVKHGKEDTVHV
EEECCCCEEEEECCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCHHHHCCCCCEEEE
LDARKTIEFRAEGKGWALRAVPTDVIAGSTARVLLRTAAELIVHEGLRPE
EECCEEEEEEECCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA