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The map label for this gene is GAR1

Identifier: 20094295

GI number: 20094295

Start: 815000

End: 815284

Strand: Reverse

Name: GAR1

Synonym: MK0859

Alternate gene names: NA

Gene position: 815284-815000 (Counterclockwise)

Preceding gene: 20094296

Following gene: 20094294

Centisome position: 48.1

GC content: 65.61

Gene sequence:

>285_bases
ATGCGCAGGCTGGGGCGCGCCCTCCACGTTACGCCCCGGGGAAATCTGATCGCAAGGGCCGATCACGTACCGCCGTTAGG
GGCGCCCGTTGTAACTCGCCGTCGTGAGCGTGTAGGTGTTATTGTGGACGTTTTTGGGCCCGCGGATAAGCCCTACGTGG
CCATCCGAGATAAGTCCCGCCACCACCTCGAGAGGTTCGTCGGGAAGGAGCTCTTCATACCACCCAGACGACGGCGAAGG
CGTCCTCCTCGCAGGCGGCGGGGTCGGCCCCGCCGCCGCAGATGA

Upstream 100 bases:

>100_bases
GCTCGGAATGTGCCAACAGGTGAAGTCTGAGTCGTGGGCTCTAGAGTGCCAAAAACAATAAAACCTTCGAGTTGAACAAT
GACACACAGGCGGTGTCGTC

Downstream 100 bases:

>100_bases
TGGGGTGTATCGAGAATGGCTGCTTCTGAAAGGAACACCGGGAAGTTCACGGAGGAATGTCCGGCGTGTGGTTCCGCAGA
GATTGTTTTCGATGAGGAGC

Product: RNA-binding protein involved in rRNA processing

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MRRLGRALHVTPRGNLIARADHVPPLGAPVVTRRRERVGVIVDVFGPADKPYVAIRDKSRHHLERFVGKELFIPPRRRRR
RPPRRRRGRPRRRR

Sequences:

>Translated_94_residues
MRRLGRALHVTPRGNLIARADHVPPLGAPVVTRRRERVGVIVDVFGPADKPYVAIRDKSRHHLERFVGKELFIPPRRRRR
RPPRRRRGRPRRRR
>Mature_94_residues
MRRLGRALHVTPRGNLIARADHVPPLGAPVVTRRRERVGVIVDVFGPADKPYVAIRDKSRHHLERFVGKELFIPPRRRRR
RPPRRRRGRPRRRR

Specific function: Unknown

COG id: COG3277

COG function: function code J; RNA-binding protein involved in rRNA processing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11172; Mature: 11172

Theoretical pI: Translated: 12.80; Mature: 12.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLGRALHVTPRGNLIARADHVPPLGAPVVTRRRERVGVIVDVFGPADKPYVAIRDKSR
CCCCCCEEEECCCCCEEEECCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEECCCH
HHLERFVGKELFIPPRRRRRRPPRRRRGRPRRRR
HHHHHHHCCCCCCCCHHHHCCCCHHHCCCCCCCC
>Mature Secondary Structure
MRRLGRALHVTPRGNLIARADHVPPLGAPVVTRRRERVGVIVDVFGPADKPYVAIRDKSR
CCCCCCEEEECCCCCEEEECCCCCCCCCCHHHCCCCCCCEEEECCCCCCCCEEEEECCCH
HHLERFVGKELFIPPRRRRRRPPRRRRGRPRRRR
HHHHHHHCCCCCCCCHHHHCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA