| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094088
Identifier: 20094088
GI number: 20094088
Start: 609636
End: 610853
Strand: Reverse
Name: 20094088
Synonym: MK0650
Alternate gene names: NA
Gene position: 610853-609636 (Counterclockwise)
Preceding gene: 20094101
Following gene: 20094087
Centisome position: 36.04
GC content: 63.96
Gene sequence:
>1218_bases GTGGGTGGACGACCGGGAGTGGACTGCGGTGGGTTCTGCCGGTACTGTTACTTCCGTGGGGTGGACTGGGAAGAAAAACG CCCTTTCGGTTGCAAGAACTGTCCACCCGGATCCCCCGGCTGTGACTACTGTGGTCGGAGCGTGTGGGAAGACAACGGGC CCTTCCGCCCGCCCGGGGTCGTGCTACAGGAGGTGGGGATGTCCCTTGGGTTCCGCCGGGAACGGGAGGCGACCGTGAGC GGCGGTGGAGACATTAGCAACTACCCGTGGCTGCGGGAGCTCGTGGCGAGCCTGAGGGACCTCGGGATTCGGAGCGTCCA GCTCGGGTACACGAGCGGGAAGGGGTTCGAGGACCCGGAGGAAGTCGAAGAGCTGTGCGATCTCGGGGTGCGGTCCGTCT CGTACACCGTGTTCGCGTGGGATCCGGAGCTCCGGCGGGAATGGATGGGTGATCGGTCTCCCGAGGCCTCGCTCGCGTGC TTGGAGGTGTTCGCGGATCGGTGCGAGGAGGTGATGGTGGCGGCCGTCCTGATCCCGGGTGTGAACGACGGAGACGTCCT GTGGAAGACGTGCGAGCGACTGGAAGAGCTCGGGATCGACGCGCTCCTCCTGATGCGGTTGGGGACGCGGGAGGAACACG GAATCATCCTAGGAAACTCTCTCGTACTGGACGTGAAACCGCACTCCTTGGACGAGTTCAAGCGGATCGTAACGGAAGTG CACGAGGAGTTCCCGTTCCGGGTCACGGGGACGCCGTTGTGGGATCCCGAAACGAGCGCCCCGTTCGCGCTCAGGACGCT GGGGGAGGAGCTCCGGGAGCTGCTCCCACCGGTCGAGGTCGAGTGTTCGCTGATCACCGGGAGGGTCGCAGCCCCTCTGA TCCGCGAGGTGTTCCGACACGTGGAGGGTGGGGAAAAAGTGGACGTGGTCCCGGTCGAGAAGGACGTGGCGTGCCTGATC ACGGAGAGGGACCTGGAACGGTTGGACGTCTCCTCGTTGAAGCGAACCGTGGTACTCCCCGGAAGGGCGCTCGTTCACGA TGCACGGGCGGAGGAATTGTTAAAACGTGACGGTTTCGAGAGAGTCGTGCTGCGGGGTCCCGACCGTCTCACGCTCGACG GTGAGGCGAGCTGTGAGGTGGATAGGGAAGAGGTGTTGGAGTTCGAGTTGAACGCGTTCCGCGATCTCATCAACACGGTC AACATTCTGGGGGAGTGA
Upstream 100 bases:
>100_bases TATCAAGTGGGAGCGCAGGGCGCGTACCCGGGGGCCACCTAATTAACCCGCCGGTAGGGCGGTCACGATCGGGGGTGAGA CCTCGCCCGTCCTCGCGGAC
Downstream 100 bases:
>100_bases AACTTGGACCACGACGCAGTAGCGATGCTTATGGAGGTGCGGGCGGATCTGAAGGAAGTAAAGGCGCTGTACCAGCGACT CGCCAGAATCATTCGGCAGG
Product: NifB/MoaA family Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MGGRPGVDCGGFCRYCYFRGVDWEEKRPFGCKNCPPGSPGCDYCGRSVWEDNGPFRPPGVVLQEVGMSLGFRREREATVS GGGDISNYPWLRELVASLRDLGIRSVQLGYTSGKGFEDPEEVEELCDLGVRSVSYTVFAWDPELRREWMGDRSPEASLAC LEVFADRCEEVMVAAVLIPGVNDGDVLWKTCERLEELGIDALLLMRLGTREEHGIILGNSLVLDVKPHSLDEFKRIVTEV HEEFPFRVTGTPLWDPETSAPFALRTLGEELRELLPPVEVECSLITGRVAAPLIREVFRHVEGGEKVDVVPVEKDVACLI TERDLERLDVSSLKRTVVLPGRALVHDARAEELLKRDGFERVVLRGPDRLTLDGEASCEVDREEVLEFELNAFRDLINTV NILGE
Sequences:
>Translated_405_residues MGGRPGVDCGGFCRYCYFRGVDWEEKRPFGCKNCPPGSPGCDYCGRSVWEDNGPFRPPGVVLQEVGMSLGFRREREATVS GGGDISNYPWLRELVASLRDLGIRSVQLGYTSGKGFEDPEEVEELCDLGVRSVSYTVFAWDPELRREWMGDRSPEASLAC LEVFADRCEEVMVAAVLIPGVNDGDVLWKTCERLEELGIDALLLMRLGTREEHGIILGNSLVLDVKPHSLDEFKRIVTEV HEEFPFRVTGTPLWDPETSAPFALRTLGEELRELLPPVEVECSLITGRVAAPLIREVFRHVEGGEKVDVVPVEKDVACLI TERDLERLDVSSLKRTVVLPGRALVHDARAEELLKRDGFERVVLRGPDRLTLDGEASCEVDREEVLEFELNAFRDLINTV NILGE >Mature_404_residues GGRPGVDCGGFCRYCYFRGVDWEEKRPFGCKNCPPGSPGCDYCGRSVWEDNGPFRPPGVVLQEVGMSLGFRREREATVSG GGDISNYPWLRELVASLRDLGIRSVQLGYTSGKGFEDPEEVEELCDLGVRSVSYTVFAWDPELRREWMGDRSPEASLACL EVFADRCEEVMVAAVLIPGVNDGDVLWKTCERLEELGIDALLLMRLGTREEHGIILGNSLVLDVKPHSLDEFKRIVTEVH EEFPFRVTGTPLWDPETSAPFALRTLGEELRELLPPVEVECSLITGRVAAPLIREVFRHVEGGEKVDVVPVEKDVACLIT ERDLERLDVSSLKRTVVLPGRALVHDARAEELLKRDGFERVVLRGPDRLTLDGEASCEVDREEVLEFELNAFRDLINTVN ILGE
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007549 - InterPro: IPR006638 - InterPro: IPR017672 - InterPro: IPR007197 [H]
Pfam domain/function: PF04459 DUF512; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 45278; Mature: 45147
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGRPGVDCGGFCRYCYFRGVDWEEKRPFGCKNCPPGSPGCDYCGRSVWEDNGPFRPPGV CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHH VLQEVGMSLGFRREREATVSGGGDISNYPWLRELVASLRDLGIRSVQLGYTSGKGFEDPE HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH EVEELCDLGVRSVSYTVFAWDPELRREWMGDRSPEASLACLEVFADRCEEVMVAAVLIPG HHHHHHHCCCHHEEEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC VNDGDVLWKTCERLEELGIDALLLMRLGTREEHGIILGNSLVLDVKPHSLDEFKRIVTEV CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHH HEEFPFRVTGTPLWDPETSAPFALRTLGEELRELLPPVEVECSLITGRVAAPLIREVFRH HHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH VEGGEKVDVVPVEKDVACLITERDLERLDVSSLKRTVVLPGRALVHDARAEELLKRDGFE CCCCCEEEEEECCCCCEEEEEHHHHHHHCHHHHCCEEECCCHHHHHHHHHHHHHHHCCCC RVVLRGPDRLTLDGEASCEVDREEVLEFELNAFRDLINTVNILGE EEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGRPGVDCGGFCRYCYFRGVDWEEKRPFGCKNCPPGSPGCDYCGRSVWEDNGPFRPPGV CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHH VLQEVGMSLGFRREREATVSGGGDISNYPWLRELVASLRDLGIRSVQLGYTSGKGFEDPE HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH EVEELCDLGVRSVSYTVFAWDPELRREWMGDRSPEASLACLEVFADRCEEVMVAAVLIPG HHHHHHHCCCHHEEEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC VNDGDVLWKTCERLEELGIDALLLMRLGTREEHGIILGNSLVLDVKPHSLDEFKRIVTEV CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHH HEEFPFRVTGTPLWDPETSAPFALRTLGEELRELLPPVEVECSLITGRVAAPLIREVFRH HHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH VEGGEKVDVVPVEKDVACLITERDLERLDVSSLKRTVVLPGRALVHDARAEELLKRDGFE CCCCCEEEEEECCCCCEEEEEHHHHHHHCHHHHCCEEECCCHHHHHHHHHHHHHHHCCCC RVVLRGPDRLTLDGEASCEVDREEVLEFELNAFRDLINTVNILGE EEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]