Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094088

Identifier: 20094088

GI number: 20094088

Start: 609636

End: 610853

Strand: Reverse

Name: 20094088

Synonym: MK0650

Alternate gene names: NA

Gene position: 610853-609636 (Counterclockwise)

Preceding gene: 20094101

Following gene: 20094087

Centisome position: 36.04

GC content: 63.96

Gene sequence:

>1218_bases
GTGGGTGGACGACCGGGAGTGGACTGCGGTGGGTTCTGCCGGTACTGTTACTTCCGTGGGGTGGACTGGGAAGAAAAACG
CCCTTTCGGTTGCAAGAACTGTCCACCCGGATCCCCCGGCTGTGACTACTGTGGTCGGAGCGTGTGGGAAGACAACGGGC
CCTTCCGCCCGCCCGGGGTCGTGCTACAGGAGGTGGGGATGTCCCTTGGGTTCCGCCGGGAACGGGAGGCGACCGTGAGC
GGCGGTGGAGACATTAGCAACTACCCGTGGCTGCGGGAGCTCGTGGCGAGCCTGAGGGACCTCGGGATTCGGAGCGTCCA
GCTCGGGTACACGAGCGGGAAGGGGTTCGAGGACCCGGAGGAAGTCGAAGAGCTGTGCGATCTCGGGGTGCGGTCCGTCT
CGTACACCGTGTTCGCGTGGGATCCGGAGCTCCGGCGGGAATGGATGGGTGATCGGTCTCCCGAGGCCTCGCTCGCGTGC
TTGGAGGTGTTCGCGGATCGGTGCGAGGAGGTGATGGTGGCGGCCGTCCTGATCCCGGGTGTGAACGACGGAGACGTCCT
GTGGAAGACGTGCGAGCGACTGGAAGAGCTCGGGATCGACGCGCTCCTCCTGATGCGGTTGGGGACGCGGGAGGAACACG
GAATCATCCTAGGAAACTCTCTCGTACTGGACGTGAAACCGCACTCCTTGGACGAGTTCAAGCGGATCGTAACGGAAGTG
CACGAGGAGTTCCCGTTCCGGGTCACGGGGACGCCGTTGTGGGATCCCGAAACGAGCGCCCCGTTCGCGCTCAGGACGCT
GGGGGAGGAGCTCCGGGAGCTGCTCCCACCGGTCGAGGTCGAGTGTTCGCTGATCACCGGGAGGGTCGCAGCCCCTCTGA
TCCGCGAGGTGTTCCGACACGTGGAGGGTGGGGAAAAAGTGGACGTGGTCCCGGTCGAGAAGGACGTGGCGTGCCTGATC
ACGGAGAGGGACCTGGAACGGTTGGACGTCTCCTCGTTGAAGCGAACCGTGGTACTCCCCGGAAGGGCGCTCGTTCACGA
TGCACGGGCGGAGGAATTGTTAAAACGTGACGGTTTCGAGAGAGTCGTGCTGCGGGGTCCCGACCGTCTCACGCTCGACG
GTGAGGCGAGCTGTGAGGTGGATAGGGAAGAGGTGTTGGAGTTCGAGTTGAACGCGTTCCGCGATCTCATCAACACGGTC
AACATTCTGGGGGAGTGA

Upstream 100 bases:

>100_bases
TATCAAGTGGGAGCGCAGGGCGCGTACCCGGGGGCCACCTAATTAACCCGCCGGTAGGGCGGTCACGATCGGGGGTGAGA
CCTCGCCCGTCCTCGCGGAC

Downstream 100 bases:

>100_bases
AACTTGGACCACGACGCAGTAGCGATGCTTATGGAGGTGCGGGCGGATCTGAAGGAAGTAAAGGCGCTGTACCAGCGACT
CGCCAGAATCATTCGGCAGG

Product: NifB/MoaA family Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MGGRPGVDCGGFCRYCYFRGVDWEEKRPFGCKNCPPGSPGCDYCGRSVWEDNGPFRPPGVVLQEVGMSLGFRREREATVS
GGGDISNYPWLRELVASLRDLGIRSVQLGYTSGKGFEDPEEVEELCDLGVRSVSYTVFAWDPELRREWMGDRSPEASLAC
LEVFADRCEEVMVAAVLIPGVNDGDVLWKTCERLEELGIDALLLMRLGTREEHGIILGNSLVLDVKPHSLDEFKRIVTEV
HEEFPFRVTGTPLWDPETSAPFALRTLGEELRELLPPVEVECSLITGRVAAPLIREVFRHVEGGEKVDVVPVEKDVACLI
TERDLERLDVSSLKRTVVLPGRALVHDARAEELLKRDGFERVVLRGPDRLTLDGEASCEVDREEVLEFELNAFRDLINTV
NILGE

Sequences:

>Translated_405_residues
MGGRPGVDCGGFCRYCYFRGVDWEEKRPFGCKNCPPGSPGCDYCGRSVWEDNGPFRPPGVVLQEVGMSLGFRREREATVS
GGGDISNYPWLRELVASLRDLGIRSVQLGYTSGKGFEDPEEVEELCDLGVRSVSYTVFAWDPELRREWMGDRSPEASLAC
LEVFADRCEEVMVAAVLIPGVNDGDVLWKTCERLEELGIDALLLMRLGTREEHGIILGNSLVLDVKPHSLDEFKRIVTEV
HEEFPFRVTGTPLWDPETSAPFALRTLGEELRELLPPVEVECSLITGRVAAPLIREVFRHVEGGEKVDVVPVEKDVACLI
TERDLERLDVSSLKRTVVLPGRALVHDARAEELLKRDGFERVVLRGPDRLTLDGEASCEVDREEVLEFELNAFRDLINTV
NILGE
>Mature_404_residues
GGRPGVDCGGFCRYCYFRGVDWEEKRPFGCKNCPPGSPGCDYCGRSVWEDNGPFRPPGVVLQEVGMSLGFRREREATVSG
GGDISNYPWLRELVASLRDLGIRSVQLGYTSGKGFEDPEEVEELCDLGVRSVSYTVFAWDPELRREWMGDRSPEASLACL
EVFADRCEEVMVAAVLIPGVNDGDVLWKTCERLEELGIDALLLMRLGTREEHGIILGNSLVLDVKPHSLDEFKRIVTEVH
EEFPFRVTGTPLWDPETSAPFALRTLGEELRELLPPVEVECSLITGRVAAPLIREVFRHVEGGEKVDVVPVEKDVACLIT
ERDLERLDVSSLKRTVVLPGRALVHDARAEELLKRDGFERVVLRGPDRLTLDGEASCEVDREEVLEFELNAFRDLINTVN
ILGE

Specific function: Unknown

COG id: COG1625

COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007549
- InterPro:   IPR006638
- InterPro:   IPR017672
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04459 DUF512; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 45278; Mature: 45147

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGRPGVDCGGFCRYCYFRGVDWEEKRPFGCKNCPPGSPGCDYCGRSVWEDNGPFRPPGV
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHH
VLQEVGMSLGFRREREATVSGGGDISNYPWLRELVASLRDLGIRSVQLGYTSGKGFEDPE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
EVEELCDLGVRSVSYTVFAWDPELRREWMGDRSPEASLACLEVFADRCEEVMVAAVLIPG
HHHHHHHCCCHHEEEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
VNDGDVLWKTCERLEELGIDALLLMRLGTREEHGIILGNSLVLDVKPHSLDEFKRIVTEV
CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHH
HEEFPFRVTGTPLWDPETSAPFALRTLGEELRELLPPVEVECSLITGRVAAPLIREVFRH
HHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH
VEGGEKVDVVPVEKDVACLITERDLERLDVSSLKRTVVLPGRALVHDARAEELLKRDGFE
CCCCCEEEEEECCCCCEEEEEHHHHHHHCHHHHCCEEECCCHHHHHHHHHHHHHHHCCCC
RVVLRGPDRLTLDGEASCEVDREEVLEFELNAFRDLINTVNILGE
EEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GGRPGVDCGGFCRYCYFRGVDWEEKRPFGCKNCPPGSPGCDYCGRSVWEDNGPFRPPGV
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHH
VLQEVGMSLGFRREREATVSGGGDISNYPWLRELVASLRDLGIRSVQLGYTSGKGFEDPE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH
EVEELCDLGVRSVSYTVFAWDPELRREWMGDRSPEASLACLEVFADRCEEVMVAAVLIPG
HHHHHHHCCCHHEEEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
VNDGDVLWKTCERLEELGIDALLLMRLGTREEHGIILGNSLVLDVKPHSLDEFKRIVTEV
CCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHH
HEEFPFRVTGTPLWDPETSAPFALRTLGEELRELLPPVEVECSLITGRVAAPLIREVFRH
HHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHH
VEGGEKVDVVPVEKDVACLITERDLERLDVSSLKRTVVLPGRALVHDARAEELLKRDGFE
CCCCCEEEEEECCCCCEEEEEHHHHHHHCHHHHCCEEECCCHHHHHHHHHHHHHHHCCCC
RVVLRGPDRLTLDGEASCEVDREEVLEFELNAFRDLINTVNILGE
EEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]