| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094077
Identifier: 20094077
GI number: 20094077
Start: 598998
End: 600539
Strand: Reverse
Name: 20094077
Synonym: MK0639
Alternate gene names: NA
Gene position: 600539-598998 (Counterclockwise)
Preceding gene: 20094078
Following gene: 20094072
Centisome position: 35.43
GC content: 60.44
Gene sequence:
>1542_bases GTGGGCGGTAACGCGTACATCGCCGTGACCGGAACCGACGCTGCGTTGAATCCCGTCGTGGAGATCTGGACGGCCCCGAC CACATCGGTGATTACGGTGATTCCCCCGAATCCGACGGTCCCAGTGACAATGGCGGGTACTATCAGCGGCGTTAAGCTGA CGAAGATAGACGCCACGCACCTGCTGCTGGCGATACTGGGTACCAACGCGTACGCCGTCCTCGACATCACCAACCCGTCC TCACCGAGCTTGACGGTGGTAAGGACCCTCGCGCCGCCGGCAGGGTTCACCAACGTGGTGATCGACGATGCCGACGGTCC GTACATAGTCGCGCACGACTCAGCTAACCCTGCCAGCGCGGTGGTGTTCAAGATCGCCGCCGACGGTAGCGTCACGGACA GCCTCACGTTCAGCGTGACCGCAGGTAACCAGCCGGCGACGATCTCGATGTACTACGGAGGTAGCCCCATGTACCTGCTC GTTACCGACACGAGCGGTGAGTGCTACCTGGTCAAGGACGGAAGCCTCAGTGTGGTTCCACTGCTCAGAACACTGAGCGT GGGTGCAACACCGATATTCGCGACCAAGCAGTTCGTCTTCGTCGGTTCTGGAGGGATGGCGTACAACGTGTACTGGGTAC TGCCGACGATCCGAACACACCGCCAGATGATTCCAATTCCGCCTGGCTGGATGGGAATGGTACCGAACGTAGTGGTGCTG GAGGTACCCGAGGTATCGGGTGAGGACAACATCGGTATCGACGAGGAGGTGCCGGGGTTCTACGGGTTCCAGCTGAAGAC ACCCACGGTACCCGCGCAGGTGACGTACTCGAGCGGTCAGATCGTGGCTCAGGCGACTGGCGGCGTCAGCAGTGACATGG TTTCGGAGGTTTATCCCACGGCCTACGGGATCGTCCTGAACACCTGGCCCAATGCGATCCCGGCACTCGTGATCGACATA GCCAACATGGACTGCTACCTAGCGGTCGTGGTCCACAACGTGACTATCGATCTCAGTGCCGAGACTATCTCGGTGACCCC GGAGAGCCCGACGTACAAGATCGTCGGTGCGATTACCGTCAAGGCCAGCTGGGAGGACCTCTTCGGAATGGCACACCAGA AGACCCTCGATCTGACGGGTAGACTGTCGGCCACCAACCCGGACGGTACGCCCGTCGGTGGGATCACCTACGACCCGGTG ACAGGACTGGTGACCATAATCGGGGCCAAGGAACCGAAGGTACTCGTCAAGATCGACCTCAACGACTACCTAGAGGGTCT GCGCACGGTAGCGCTAGGAACCGGCGTCCCGCCCGTGACGTCGCTGGAGCAGCGTGTGAGTAACCTCGAGCACGCCGTCA GCACGCTCAGTGCGCAGATAGGCTCCATGAGCTCGGAGATAGCCAATATTAAGAGCGATATCAACAACATCAACGCAGAA ATACAGGAGATCAAGAACGGGATGAAGAAGGGAGTACCGGTAAGCCCGATGGTTGTACTGGCCGGGCTGCTGGCGGCGCT GGCGGTCCTCCGGCGCCGCTAA
Upstream 100 bases:
>100_bases GAACACACTGACGGTATTGACAGGCCTGCCGATCACACCGATTTCGTACCCCGGTGTGCCCACCGCCATAACCACACTGA CGGACTTCCACCCGCTCGAA
Downstream 100 bases:
>100_bases TCCCCCTCTCCTTTCTTCTCACCTATCGTTACGAGTTACATAACGATTCACGGACGGCTGATCACAGACCGTCTGGAAGG AACTCTTCCTGCACGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MGGNAYIAVTGTDAALNPVVEIWTAPTTSVITVIPPNPTVPVTMAGTISGVKLTKIDATHLLLAILGTNAYAVLDITNPS SPSLTVVRTLAPPAGFTNVVIDDADGPYIVAHDSANPASAVVFKIAADGSVTDSLTFSVTAGNQPATISMYYGGSPMYLL VTDTSGECYLVKDGSLSVVPLLRTLSVGATPIFATKQFVFVGSGGMAYNVYWVLPTIRTHRQMIPIPPGWMGMVPNVVVL EVPEVSGEDNIGIDEEVPGFYGFQLKTPTVPAQVTYSSGQIVAQATGGVSSDMVSEVYPTAYGIVLNTWPNAIPALVIDI ANMDCYLAVVVHNVTIDLSAETISVTPESPTYKIVGAITVKASWEDLFGMAHQKTLDLTGRLSATNPDGTPVGGITYDPV TGLVTIIGAKEPKVLVKIDLNDYLEGLRTVALGTGVPPVTSLEQRVSNLEHAVSTLSAQIGSMSSEIANIKSDINNINAE IQEIKNGMKKGVPVSPMVVLAGLLAALAVLRRR
Sequences:
>Translated_513_residues MGGNAYIAVTGTDAALNPVVEIWTAPTTSVITVIPPNPTVPVTMAGTISGVKLTKIDATHLLLAILGTNAYAVLDITNPS SPSLTVVRTLAPPAGFTNVVIDDADGPYIVAHDSANPASAVVFKIAADGSVTDSLTFSVTAGNQPATISMYYGGSPMYLL VTDTSGECYLVKDGSLSVVPLLRTLSVGATPIFATKQFVFVGSGGMAYNVYWVLPTIRTHRQMIPIPPGWMGMVPNVVVL EVPEVSGEDNIGIDEEVPGFYGFQLKTPTVPAQVTYSSGQIVAQATGGVSSDMVSEVYPTAYGIVLNTWPNAIPALVIDI ANMDCYLAVVVHNVTIDLSAETISVTPESPTYKIVGAITVKASWEDLFGMAHQKTLDLTGRLSATNPDGTPVGGITYDPV TGLVTIIGAKEPKVLVKIDLNDYLEGLRTVALGTGVPPVTSLEQRVSNLEHAVSTLSAQIGSMSSEIANIKSDINNINAE IQEIKNGMKKGVPVSPMVVLAGLLAALAVLRRR >Mature_512_residues GGNAYIAVTGTDAALNPVVEIWTAPTTSVITVIPPNPTVPVTMAGTISGVKLTKIDATHLLLAILGTNAYAVLDITNPSS PSLTVVRTLAPPAGFTNVVIDDADGPYIVAHDSANPASAVVFKIAADGSVTDSLTFSVTAGNQPATISMYYGGSPMYLLV TDTSGECYLVKDGSLSVVPLLRTLSVGATPIFATKQFVFVGSGGMAYNVYWVLPTIRTHRQMIPIPPGWMGMVPNVVVLE VPEVSGEDNIGIDEEVPGFYGFQLKTPTVPAQVTYSSGQIVAQATGGVSSDMVSEVYPTAYGIVLNTWPNAIPALVIDIA NMDCYLAVVVHNVTIDLSAETISVTPESPTYKIVGAITVKASWEDLFGMAHQKTLDLTGRLSATNPDGTPVGGITYDPVT GLVTIIGAKEPKVLVKIDLNDYLEGLRTVALGTGVPPVTSLEQRVSNLEHAVSTLSAQIGSMSSEIANIKSDINNINAEI QEIKNGMKKGVPVSPMVVLAGLLAALAVLRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53704; Mature: 53573
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGNAYIAVTGTDAALNPVVEIWTAPTTSVITVIPPNPTVPVTMAGTISGVKLTKIDATH CCCCEEEEEECCCHHCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEECHHH LLLAILGTNAYAVLDITNPSSPSLTVVRTLAPPAGFTNVVIDDADGPYIVAHDSANPASA EEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCEE VVFKIAADGSVTDSLTFSVTAGNQPATISMYYGGSPMYLLVTDTSGECYLVKDGSLSVVP EEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCEEEEECCCEEEHH LLRTLSVGATPIFATKQFVFVGSGGMAYNVYWVLPTIRTHRQMIPIPPGWMGMVPNVVVL HHHHHHCCCCEEEEEEEEEEEECCCEEEEEEEEECCCCCCCEEECCCCCHHHCCCCEEEE EVPEVSGEDNIGIDEEVPGFYGFQLKTPTVPAQVTYSSGQIVAQATGGVSSDMVSEVYPT EECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCHHHHHHHCCC AYGIVLNTWPNAIPALVIDIANMDCYLAVVVHNVTIDLSAETISVTPESPTYKIVGAITV EEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEEEEEECEEEEECCCCCCEEEEEEEEE KASWEDLFGMAHQKTLDLTGRLSATNPDGTPVGGITYDPVTGLVTIIGAKEPKVLVKIDL EECHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEEECCCCEEEEEEECCCCEEEEEEEH NDYLEGLRTVALGTGVPPVTSLEQRVSNLEHAVSTLSAQIGSMSSEIANIKSDINNINAE HHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IQEIKNGMKKGVPVSPMVVLAGLLAALAVLRRR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GGNAYIAVTGTDAALNPVVEIWTAPTTSVITVIPPNPTVPVTMAGTISGVKLTKIDATH CCCEEEEEECCCHHCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEECHHH LLLAILGTNAYAVLDITNPSSPSLTVVRTLAPPAGFTNVVIDDADGPYIVAHDSANPASA EEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEECCCCCCEE VVFKIAADGSVTDSLTFSVTAGNQPATISMYYGGSPMYLLVTDTSGECYLVKDGSLSVVP EEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCEEEEECCCEEEHH LLRTLSVGATPIFATKQFVFVGSGGMAYNVYWVLPTIRTHRQMIPIPPGWMGMVPNVVVL HHHHHHCCCCEEEEEEEEEEEECCCEEEEEEEEECCCCCCCEEECCCCCHHHCCCCEEEE EVPEVSGEDNIGIDEEVPGFYGFQLKTPTVPAQVTYSSGQIVAQATGGVSSDMVSEVYPT EECCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCHHHHHHHCCC AYGIVLNTWPNAIPALVIDIANMDCYLAVVVHNVTIDLSAETISVTPESPTYKIVGAITV EEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEEEEEEECEEEEECCCCCCEEEEEEEEE KASWEDLFGMAHQKTLDLTGRLSATNPDGTPVGGITYDPVTGLVTIIGAKEPKVLVKIDL EECHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEEECCCCEEEEEEECCCCEEEEEEEH NDYLEGLRTVALGTGVPPVTSLEQRVSNLEHAVSTLSAQIGSMSSEIANIKSDINNINAE HHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IQEIKNGMKKGVPVSPMVVLAGLLAALAVLRRR HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA