Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094072

Identifier: 20094072

GI number: 20094072

Start: 595894

End: 596667

Strand: Reverse

Name: 20094072

Synonym: MK0634

Alternate gene names: NA

Gene position: 596667-595894 (Counterclockwise)

Preceding gene: 20094077

Following gene: 20094070

Centisome position: 35.2

GC content: 68.86

Gene sequence:

>774_bases
ATGAGGCGCCTCCCCCGGGGGGTGCTGTGCGTGGGGCTCCGGGCTGTCGCGTTCTCCGCAGACCTTTCCGAGGACGACGT
GCGCGTGTCCCGAGGACTACTGCGGCGCGTGGAGCGCGATCTGAAGGAACTACGGCGGGGGTTCCGGGACGAGCTGATGT
ACGTGGTCCTGGGGCCGGTGTGCGGGGACGATCTCGCGGTAGTGTACGTCGTCGAAGAGGGGGCACTGGAGGACGTGAAC
GCCGCCGTCTTCGACCTCTTCAGGGAGTATGGTGGCGAGGACGTTATGGGGGTTTCGGAGTCTCCGGAGGGCGCGGGCGA
GGGGCCGTCCTACGCCGAGGCGGCCTGCCCGGAGTCCGAGTACCAGGACGTGGTCGTGACGCTGTTCGACACGTACGCGG
CGGAGAACCGCGTGGCCGAGGTCGCGGAGGTGTGTCGGAGGGCCGCGGAGGGTCTGTGTTACGACGTCGGCGGGGGACCC
GTTCAGGAGCCCATGGAGATCCCGGGCGTGGGCTACGTTGGGCCGGAGACGGACGACCCCGTCCTGATAGCCACAACCGA
GCGGTTGGATCAGGTGGGGCCGACGGCCGGGGCCATCTTAGGGGCCGGAAGGGGTGCGGGAGCGCGACCCGTACGTCGGG
GCGCGCCGGCCGAGGTACTCCCGGGGACGGTGATATTCTCGGTAGCGATCGTGTTGAACGGGAACGTGATAGACGGTGTG
AGGGCGCTGGAGGAGGGCACCGGCACCGAGCGGTGGCCGTTACGATACCTCTGA

Upstream 100 bases:

>100_bases
TAGACAGTGTCGCACGGGATGGCGACGAGTTTCCCCGCACGGAGGGCGCGGACGACGTGTTTAACCGCGTGGGGATCCTC
CTCCTCGAGCACGGTAACCA

Downstream 100 bases:

>100_bases
CAGCACGTCGGCCATAGCCTCGGCGGCGGCACCGACGTCCACGTCGACGCCGAGCTCGCGCATACCGAGACCGATGCAGG
TCACCGCCGTGATCATATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MRRLPRGVLCVGLRAVAFSADLSEDDVRVSRGLLRRVERDLKELRRGFRDELMYVVLGPVCGDDLAVVYVVEEGALEDVN
AAVFDLFREYGGEDVMGVSESPEGAGEGPSYAEAACPESEYQDVVVTLFDTYAAENRVAEVAEVCRRAAEGLCYDVGGGP
VQEPMEIPGVGYVGPETDDPVLIATTERLDQVGPTAGAILGAGRGAGARPVRRGAPAEVLPGTVIFSVAIVLNGNVIDGV
RALEEGTGTERWPLRYL

Sequences:

>Translated_257_residues
MRRLPRGVLCVGLRAVAFSADLSEDDVRVSRGLLRRVERDLKELRRGFRDELMYVVLGPVCGDDLAVVYVVEEGALEDVN
AAVFDLFREYGGEDVMGVSESPEGAGEGPSYAEAACPESEYQDVVVTLFDTYAAENRVAEVAEVCRRAAEGLCYDVGGGP
VQEPMEIPGVGYVGPETDDPVLIATTERLDQVGPTAGAILGAGRGAGARPVRRGAPAEVLPGTVIFSVAIVLNGNVIDGV
RALEEGTGTERWPLRYL
>Mature_257_residues
MRRLPRGVLCVGLRAVAFSADLSEDDVRVSRGLLRRVERDLKELRRGFRDELMYVVLGPVCGDDLAVVYVVEEGALEDVN
AAVFDLFREYGGEDVMGVSESPEGAGEGPSYAEAACPESEYQDVVVTLFDTYAAENRVAEVAEVCRRAAEGLCYDVGGGP
VQEPMEIPGVGYVGPETDDPVLIATTERLDQVGPTAGAILGAGRGAGARPVRRGAPAEVLPGTVIFSVAIVLNGNVIDGV
RALEEGTGTERWPLRYL

Specific function: Unknown

COG id: COG4053

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH564 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012021 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27415; Mature: 27415

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLPRGVLCVGLRAVAFSADLSEDDVRVSRGLLRRVERDLKELRRGFRDELMYVVLGPV
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
CGDDLAVVYVVEEGALEDVNAAVFDLFREYGGEDVMGVSESPEGAGEGPSYAEAACPESE
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHCCCCHH
YQDVVVTLFDTYAAENRVAEVAEVCRRAAEGLCYDVGGGPVQEPMEIPGVGYVGPETDDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
VLIATTERLDQVGPTAGAILGAGRGAGARPVRRGAPAEVLPGTVIFSVAIVLNGNVIDGV
EEEEEHHHHHHCCCCHHHHEECCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCHHHHH
RALEEGTGTERWPLRYL
HHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRRLPRGVLCVGLRAVAFSADLSEDDVRVSRGLLRRVERDLKELRRGFRDELMYVVLGPV
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
CGDDLAVVYVVEEGALEDVNAAVFDLFREYGGEDVMGVSESPEGAGEGPSYAEAACPESE
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHCCCCHH
YQDVVVTLFDTYAAENRVAEVAEVCRRAAEGLCYDVGGGPVQEPMEIPGVGYVGPETDDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
VLIATTERLDQVGPTAGAILGAGRGAGARPVRRGAPAEVLPGTVIFSVAIVLNGNVIDGV
EEEEEHHHHHHCCCCHHHHEECCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCHHHHH
RALEEGTGTERWPLRYL
HHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]