Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094008

Identifier: 20094008

GI number: 20094008

Start: 532442

End: 532792

Strand: Reverse

Name: 20094008

Synonym: MK0570

Alternate gene names: NA

Gene position: 532792-532442 (Counterclockwise)

Preceding gene: 20094010

Following gene: 20094005

Centisome position: 31.43

GC content: 58.12

Gene sequence:

>351_bases
ATGAGAATTAGACCCGACTCGACCGCCGAAGATATCCTACCGCTTGCGATGGCAGTTCATGAGCTGGTCAATCGCCTGCC
CGTGACCATGCGAACCCGGGATAACCCTGGGGTCAGAATCGAGGACGGTGAGGTTATCGACGACGAGTACACGGGTCCAG
TTCTGGAGGAAGTGCTCGAGAAAGGTGAGGTGATCAGGAAGGTGCCGGAATCGGGACCTTACGAGGGAACGCCGGTCGTA
GTTGTACCCATCAAGGACGAGGGTGAGACTATCGCCGCCCTCGGTGTCGTCGACCTCACTTACGGTATCTACTCCTCGCT
CAGGAAGGTGACTCAGCGCCCCATCCGGTGA

Upstream 100 bases:

>100_bases
AGGGCACCGATAGCACTTCGGCTTCAAGTGATCCCCACCGAACGTCCCGATGAGAACTCCGTTAAAGTATCCGCTCCACT
GGAGAACCGGGGCAGTCGTG

Downstream 100 bases:

>100_bases
ATCTCTAAAACCCTATCTACCGTCCTTCTGAGGTCGCCTAGACGTTCTACCAGGTATCCTTCGGACGATAACTTCTCCGC
GAGCCTCTCGTCCCACGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MRIRPDSTAEDILPLAMAVHELVNRLPVTMRTRDNPGVRIEDGEVIDDEYTGPVLEEVLEKGEVIRKVPESGPYEGTPVV
VVPIKDEGETIAALGVVDLTYGIYSSLRKVTQRPIR

Sequences:

>Translated_116_residues
MRIRPDSTAEDILPLAMAVHELVNRLPVTMRTRDNPGVRIEDGEVIDDEYTGPVLEEVLEKGEVIRKVPESGPYEGTPVV
VVPIKDEGETIAALGVVDLTYGIYSSLRKVTQRPIR
>Mature_116_residues
MRIRPDSTAEDILPLAMAVHELVNRLPVTMRTRDNPGVRIEDGEVIDDEYTGPVLEEVLEKGEVIRKVPESGPYEGTPVV
VVPIKDEGETIAALGVVDLTYGIYSSLRKVTQRPIR

Specific function: Unknown

COG id: COG4048

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012029 [H]

Pfam domain/function: PF09884 DUF2111 [H]

EC number: NA

Molecular weight: Translated: 12852; Mature: 12852

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRPDSTAEDILPLAMAVHELVNRLPVTMRTRDNPGVRIEDGEVIDDEYTGPVLEEVLE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCEECCCCCCHHHHHHHH
KGEVIRKVPESGPYEGTPVVVVPIKDEGETIAALGVVDLTYGIYSSLRKVTQRPIR
HHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRIRPDSTAEDILPLAMAVHELVNRLPVTMRTRDNPGVRIEDGEVIDDEYTGPVLEEVLE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCEECCCCCCHHHHHHHH
KGEVIRKVPESGPYEGTPVVVVPIKDEGETIAALGVVDLTYGIYSSLRKVTQRPIR
HHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]