| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094008
Identifier: 20094008
GI number: 20094008
Start: 532442
End: 532792
Strand: Reverse
Name: 20094008
Synonym: MK0570
Alternate gene names: NA
Gene position: 532792-532442 (Counterclockwise)
Preceding gene: 20094010
Following gene: 20094005
Centisome position: 31.43
GC content: 58.12
Gene sequence:
>351_bases ATGAGAATTAGACCCGACTCGACCGCCGAAGATATCCTACCGCTTGCGATGGCAGTTCATGAGCTGGTCAATCGCCTGCC CGTGACCATGCGAACCCGGGATAACCCTGGGGTCAGAATCGAGGACGGTGAGGTTATCGACGACGAGTACACGGGTCCAG TTCTGGAGGAAGTGCTCGAGAAAGGTGAGGTGATCAGGAAGGTGCCGGAATCGGGACCTTACGAGGGAACGCCGGTCGTA GTTGTACCCATCAAGGACGAGGGTGAGACTATCGCCGCCCTCGGTGTCGTCGACCTCACTTACGGTATCTACTCCTCGCT CAGGAAGGTGACTCAGCGCCCCATCCGGTGA
Upstream 100 bases:
>100_bases AGGGCACCGATAGCACTTCGGCTTCAAGTGATCCCCACCGAACGTCCCGATGAGAACTCCGTTAAAGTATCCGCTCCACT GGAGAACCGGGGCAGTCGTG
Downstream 100 bases:
>100_bases ATCTCTAAAACCCTATCTACCGTCCTTCTGAGGTCGCCTAGACGTTCTACCAGGTATCCTTCGGACGATAACTTCTCCGC GAGCCTCTCGTCCCACGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MRIRPDSTAEDILPLAMAVHELVNRLPVTMRTRDNPGVRIEDGEVIDDEYTGPVLEEVLEKGEVIRKVPESGPYEGTPVV VVPIKDEGETIAALGVVDLTYGIYSSLRKVTQRPIR
Sequences:
>Translated_116_residues MRIRPDSTAEDILPLAMAVHELVNRLPVTMRTRDNPGVRIEDGEVIDDEYTGPVLEEVLEKGEVIRKVPESGPYEGTPVV VVPIKDEGETIAALGVVDLTYGIYSSLRKVTQRPIR >Mature_116_residues MRIRPDSTAEDILPLAMAVHELVNRLPVTMRTRDNPGVRIEDGEVIDDEYTGPVLEEVLEKGEVIRKVPESGPYEGTPVV VVPIKDEGETIAALGVVDLTYGIYSSLRKVTQRPIR
Specific function: Unknown
COG id: COG4048
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012029 [H]
Pfam domain/function: PF09884 DUF2111 [H]
EC number: NA
Molecular weight: Translated: 12852; Mature: 12852
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRPDSTAEDILPLAMAVHELVNRLPVTMRTRDNPGVRIEDGEVIDDEYTGPVLEEVLE CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCEECCCCCCHHHHHHHH KGEVIRKVPESGPYEGTPVVVVPIKDEGETIAALGVVDLTYGIYSSLRKVTQRPIR HHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRIRPDSTAEDILPLAMAVHELVNRLPVTMRTRDNPGVRIEDGEVIDDEYTGPVLEEVLE CCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCEECCCCCCHHHHHHHH KGEVIRKVPESGPYEGTPVVVVPIKDEGETIAALGVVDLTYGIYSSLRKVTQRPIR HHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]