| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093931
Identifier: 20093931
GI number: 20093931
Start: 454678
End: 455469
Strand: Reverse
Name: 20093931
Synonym: MK0493
Alternate gene names: NA
Gene position: 455469-454678 (Counterclockwise)
Preceding gene: 20093932
Following gene: 20093929
Centisome position: 26.87
GC content: 56.82
Gene sequence:
>792_bases ATGGATGTGACTATACTGGAAAAGTTGTACCGGAACAGCGGCGCCGAGGAGTCACTCCGCACCCAGGTTCAAAGCGTTAT ATCTGATTTCGACGCCGAGCTCGAGGAGATCAGGAAAAACTTCAGGGCTTGGGCAGTGTTACGCATTCGAGGCCCTGAGG TGGAAGAAGCTGCAGAAGAAATCGTGGAAGAGTTCGACACCGTGAGATCGTTGTTCGACGTTTCTCCGGGCGACGTCATC TACGGTCGGATCGTGGACCTGTACCGCGTCGGCTACGGTATCTACGTCGACATCGGAGTAGTAGGTCCCGAAGTCGTGGA CGCGCTCGTGCCGCTTTACAGACTCCGTGAGCAACTCCTGGACGGTGAGAAGGCGTCGATACGTGACATCGGTAGGAGTT TCGGCTTCGTCGAGAACATGCCTCTAGAGGTGGAGATCGTCGAGGTGAACGAGGAACGTGGTGAGATCGAAGCGAGACTT ACCGATGAGCAGGTCGAATACCTGCTCGAGATGGCGGCCGACCCTTACGATAGGATGATCGTAGCCGGTATCACGCGGAA ACGCCTTCAGAGGATACTGAACCGCGCCGGCTTCGGGCGACGCGTCATCCGGATCGAAAGATGGGGGCTTCTGGAGAACG AAGTGGTGTTCGATGAAGGCGTCGACGCCCCCGGCGTCCTGGCTAAAATAGGACCGTACCTGCGAGGCGGCGAAGTGGAG CTGATATACGATGACAAGTTCTTGGAGCGGATAGGGTTCATCCCCAGTCCTGAAGGCCCCATCCTCGAGTGA
Upstream 100 bases:
>100_bases GATTCTCCGGCCGTCAAGCGCCTGATCGAGCTTCATAACGAGTTGGTCGATCTGAACGCTATACCTCCCGAATTAACCCG GTGGTGATCGTGTGCCCGTT
Downstream 100 bases:
>100_bases CGTTCAGTCACAGATTCCTTCCCAGAGATCCATGATCGGTTCGATCTCGATCGCCAGCACCCCGAACATTTTCTCCTTCC CACTCGAGTAAAAGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MDVTILEKLYRNSGAEESLRTQVQSVISDFDAELEEIRKNFRAWAVLRIRGPEVEEAAEEIVEEFDTVRSLFDVSPGDVI YGRIVDLYRVGYGIYVDIGVVGPEVVDALVPLYRLREQLLDGEKASIRDIGRSFGFVENMPLEVEIVEVNEERGEIEARL TDEQVEYLLEMAADPYDRMIVAGITRKRLQRILNRAGFGRRVIRIERWGLLENEVVFDEGVDAPGVLAKIGPYLRGGEVE LIYDDKFLERIGFIPSPEGPILE
Sequences:
>Translated_263_residues MDVTILEKLYRNSGAEESLRTQVQSVISDFDAELEEIRKNFRAWAVLRIRGPEVEEAAEEIVEEFDTVRSLFDVSPGDVI YGRIVDLYRVGYGIYVDIGVVGPEVVDALVPLYRLREQLLDGEKASIRDIGRSFGFVENMPLEVEIVEVNEERGEIEARL TDEQVEYLLEMAADPYDRMIVAGITRKRLQRILNRAGFGRRVIRIERWGLLENEVVFDEGVDAPGVLAKIGPYLRGGEVE LIYDDKFLERIGFIPSPEGPILE >Mature_263_residues MDVTILEKLYRNSGAEESLRTQVQSVISDFDAELEEIRKNFRAWAVLRIRGPEVEEAAEEIVEEFDTVRSLFDVSPGDVI YGRIVDLYRVGYGIYVDIGVVGPEVVDALVPLYRLREQLLDGEKASIRDIGRSFGFVENMPLEVEIVEVNEERGEIEARL TDEQVEYLLEMAADPYDRMIVAGITRKRLQRILNRAGFGRRVIRIERWGLLENEVVFDEGVDAPGVLAKIGPYLRGGEVE LIYDDKFLERIGFIPSPEGPILE
Specific function: Unknown
COG id: COG4044
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29937; Mature: 29937
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS50126 S1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVTILEKLYRNSGAEESLRTQVQSVISDFDAELEEIRKNFRAWAVLRIRGPEVEEAAEE CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHH IVEEFDTVRSLFDVSPGDVIYGRIVDLYRVGYGIYVDIGVVGPEVVDALVPLYRLREQLL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH DGEKASIRDIGRSFGFVENMPLEVEIVEVNEERGEIEARLTDEQVEYLLEMAADPYDRMI CCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHHCCCHHHHH VAGITRKRLQRILNRAGFGRRVIRIERWGLLENEVVFDEGVDAPGVLAKIGPYLRGGEVE HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHCCCCCCCEEE LIYDDKFLERIGFIPSPEGPILE EEECHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDVTILEKLYRNSGAEESLRTQVQSVISDFDAELEEIRKNFRAWAVLRIRGPEVEEAAEE CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHH IVEEFDTVRSLFDVSPGDVIYGRIVDLYRVGYGIYVDIGVVGPEVVDALVPLYRLREQLL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH DGEKASIRDIGRSFGFVENMPLEVEIVEVNEERGEIEARLTDEQVEYLLEMAADPYDRMI CCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHHHHHCCCHHHHH VAGITRKRLQRILNRAGFGRRVIRIERWGLLENEVVFDEGVDAPGVLAKIGPYLRGGEVE HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHCCCCCCCEEE LIYDDKFLERIGFIPSPEGPILE EEECHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA