| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093834
Identifier: 20093834
GI number: 20093834
Start: 378195
End: 379127
Strand: Reverse
Name: 20093834
Synonym: MK0396
Alternate gene names: NA
Gene position: 379127-378195 (Counterclockwise)
Preceding gene: 20093835
Following gene: 20093831
Centisome position: 22.37
GC content: 47.16
Gene sequence:
>933_bases ATGGGGGATCGACCGCGTCGACTTGGGTCTAGACTATTGTACGCGGGATGTGTGCTACTCACTGAAACAGTGGACGCTAT AATGGACAAATTGAAATCTAATTGTGACATCGTGCGCGTACAGGTAGAAGATGTTTCTTTTCATCTTCGTGTTCATACAA ATGATGCTGGTGTATCACGAGAACTTCGGCTTCGCAATATTCGTGAACCGAAAGCGTCCAAATATCTTGTTGGTAAATTT CTTAATGATGAAGAAATAGCTTTTGATGTTGGAGCAAATATTGGCTATTACGCTATTCTTACAGCGTTAGCTTCTGAGCG ATCTCGAGTGTATGCTATCGAACCCGTGAGGGAAAACTTGGAATTACTTAGGGAGAATATAGCTCTTAATAATTTGGAAG ATAGGGTTAAAGCTTTCGAGTATGCAGTATCTGATAAGTGTGGTAGGATTCGCATGATTCTGGAAAATAGATCTAATTGG CATCGTATCGTTAACGCCGAGGATGGTGATTACATAGAGGTTGAGTCGATAACACTCGACGAGTTGTCTGAAAAACTCGG CGAGAGGCCCACTTATGTACGAATGGATGTTGAAGGAGCTGAGTTGGAGGTAATTCGGGGTATGGTTGAGCTACTGGAAT CGGATGATCCACCGAAGTTGTTCATCGAACATCACATACATCTGCTGGGGCTCGATGCTACTCTCGACCTCATTGAAACG CTTCTGGACTACGGTCTCGAGATCGCCGCAGCTTTCGGATATCCACATGCATCGCTCCACGACCGAGAGGGAGGGTACCG GCCGCTCGTCGGCGAAGTGGTCCGGTGGCGCGGACTCGATGTGGAACTGTACGAGCCGTCGTTCGAAGAGCTGCATGACG TGATCGTAGAGAAGAGTTGGGACTGCTTCCACGTCTTCTATCGGCCCGTCTGA
Upstream 100 bases:
>100_bases CGACTATGACTTGAATTACTATGTGTTTTCAGAACTAGTTCTCTAGGGGAACTTTCACTTGCGAAAGCGTTTCCAGACTG CTCTCGGTCTCTATCCTGGA
Downstream 100 bases:
>100_bases CGCCACAGTCTCGGACTTAAGAATACACCGACGGGTTCGCCCGCAGTCTCGGCGAGCTTCCAGGCACCCGGTATCACGTC CAGCTCTTCCGGCCGCTCGA
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: FkbM Family Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Fkbm Family; Lipopolysaccharide Biosynthesis Protein; SAM Dependent Methyltransferase
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MGDRPRRLGSRLLYAGCVLLTETVDAIMDKLKSNCDIVRVQVEDVSFHLRVHTNDAGVSRELRLRNIREPKASKYLVGKF LNDEEIAFDVGANIGYYAILTALASERSRVYAIEPVRENLELLRENIALNNLEDRVKAFEYAVSDKCGRIRMILENRSNW HRIVNAEDGDYIEVESITLDELSEKLGERPTYVRMDVEGAELEVIRGMVELLESDDPPKLFIEHHIHLLGLDATLDLIET LLDYGLEIAAAFGYPHASLHDREGGYRPLVGEVVRWRGLDVELYEPSFEELHDVIVEKSWDCFHVFYRPV
Sequences:
>Translated_310_residues MGDRPRRLGSRLLYAGCVLLTETVDAIMDKLKSNCDIVRVQVEDVSFHLRVHTNDAGVSRELRLRNIREPKASKYLVGKF LNDEEIAFDVGANIGYYAILTALASERSRVYAIEPVRENLELLRENIALNNLEDRVKAFEYAVSDKCGRIRMILENRSNW HRIVNAEDGDYIEVESITLDELSEKLGERPTYVRMDVEGAELEVIRGMVELLESDDPPKLFIEHHIHLLGLDATLDLIET LLDYGLEIAAAFGYPHASLHDREGGYRPLVGEVVRWRGLDVELYEPSFEELHDVIVEKSWDCFHVFYRPV >Mature_309_residues GDRPRRLGSRLLYAGCVLLTETVDAIMDKLKSNCDIVRVQVEDVSFHLRVHTNDAGVSRELRLRNIREPKASKYLVGKFL NDEEIAFDVGANIGYYAILTALASERSRVYAIEPVRENLELLRENIALNNLEDRVKAFEYAVSDKCGRIRMILENRSNWH RIVNAEDGDYIEVESITLDELSEKLGERPTYVRMDVEGAELEVIRGMVELLESDDPPKLFIEHHIHLLGLDATLDLIETL LDYGLEIAAAFGYPHASLHDREGGYRPLVGEVVRWRGLDVELYEPSFEELHDVIVEKSWDCFHVFYRPV
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35556; Mature: 35425
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDRPRRLGSRLLYAGCVLLTETVDAIMDKLKSNCDIVRVQVEDVSFHLRVHTNDAGVSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCH ELRLRNIREPKASKYLVGKFLNDEEIAFDVGANIGYYAILTALASERSRVYAIEPVRENL HHHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCHHHHH ELLRENIALNNLEDRVKAFEYAVSDKCGRIRMILENRSNWHRIVNAEDGDYIEVESITLD HHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCHH ELSEKLGERPTYVRMDVEGAELEVIRGMVELLESDDPPKLFIEHHIHLLGLDATLDLIET HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCHHHHHHHH LLDYGLEIAAAFGYPHASLHDREGGYRPLVGEVVRWRGLDVELYEPSFEELHDVIVEKSW HHHCCHHEEHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCC DCFHVFYRPV CEEEEEEECC >Mature Secondary Structure GDRPRRLGSRLLYAGCVLLTETVDAIMDKLKSNCDIVRVQVEDVSFHLRVHTNDAGVSR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCH ELRLRNIREPKASKYLVGKFLNDEEIAFDVGANIGYYAILTALASERSRVYAIEPVRENL HHHHHCCCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCHHHHH ELLRENIALNNLEDRVKAFEYAVSDKCGRIRMILENRSNWHRIVNAEDGDYIEVESITLD HHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCHH ELSEKLGERPTYVRMDVEGAELEVIRGMVELLESDDPPKLFIEHHIHLLGLDATLDLIET HHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCHHHHHHHH LLDYGLEIAAAFGYPHASLHDREGGYRPLVGEVVRWRGLDVELYEPSFEELHDVIVEKSW HHHCCHHEEHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCC DCFHVFYRPV CEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA