| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093752
Identifier: 20093752
GI number: 20093752
Start: 302397
End: 303113
Strand: Direct
Name: 20093752
Synonym: MK0312
Alternate gene names: NA
Gene position: 302397-303113 (Clockwise)
Preceding gene: 20093747
Following gene: 20093753
Centisome position: 17.84
GC content: 66.53
Gene sequence:
>717_bases GTGACCACCCAGCAGAACGGAAAGCCGATAACCCTACAACCATTCACCATTCCGCGACTCCCATTTCGTGCGCGCCGACC TCACCGGCACGGACTACGGACCGTACCACACGCCCTACACCCGGCTCGCGCCCGGAGCCACGCTCGACTTCACCCTCGAC GTGACCGCGGACCGCTCTCCGGGCAGCTTCTGATCGCCCGACGAGTACTCTTCCCCTACCCACCCGTGCCCACCACCCTC CAGGCCGAGATCGAACGCCCCACCAACTACCGCCTGAACGGGAAGCAGGTATCGTTCTGGGTCCCCGCCCCGGATGTGAA GTACGAGGTGCGGAGCATGGTGAAAGCGAACGGTCAGCTCTCGTTCCAGCACGTGCAGGGTGTGAGCGAGCGGCAGGGGA TCGTCACGGTCGAGCTGCAAGGCGACCCGGAGTTCGTGGGAGTCCTCCTCAGGCAACCACCGCGCGTGGCGTACGGGGTG CGAGACCGAGTACGACTCTCGCTGCGCGGTCGTGGGCCGGCCGCCCGGGGTGTAAAGGTGTCCTGGCGTGCGGACGGTGA GCGGACGCGGATCGAGTTGAGTGGTAGTGGGCGCGTTCTCCTTGGGCTGATCCTGGACGGTGGAGCGATGGACGTGCGCG TGGATGGTGGTAGCGTGCTCGAGACGGGACCCTGCCGAGCGGGCGGGGTTACGCGATCGTGGACGTGGGTGTCGTGA
Upstream 100 bases:
>100_bases GCGCCCGAACTCACCCACTTCCTCGAACCACTGAAACTCGAACATCACCTACCTCAACTGGACCCACCTCCACTTCCCCG ACCGCGACCTCGACCAGCAC
Downstream 100 bases:
>100_bases GCAGGGAGCGCGTGCTGGTCGTGCACTCCACCTCGCGCGTGGTGGACGTGCTCGCGCGCGTGGTGCCCGCACCGAGCGAG GGCGGGGTGCGGTAGGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MTTQQNGKPITLQPFTIPRLPFRARRPHRHGLRTVPHALHPARARSHARLHPRRDRGPLSGQLLIARRVLFPYPPVPTTL QAEIERPTNYRLNGKQVSFWVPAPDVKYEVRSMVKANGQLSFQHVQGVSERQGIVTVELQGDPEFVGVLLRQPPRVAYGV RDRVRLSLRGRGPAARGVKVSWRADGERTRIELSGSGRVLLGLILDGGAMDVRVDGGSVLETGPCRAGGVTRSWTWVS
Sequences:
>Translated_238_residues MTTQQNGKPITLQPFTIPRLPFRARRPHRHGLRTVPHALHPARARSHARLHPRRDRGPLSGQLLIARRVLFPYPPVPTTL QAEIERPTNYRLNGKQVSFWVPAPDVKYEVRSMVKANGQLSFQHVQGVSERQGIVTVELQGDPEFVGVLLRQPPRVAYGV RDRVRLSLRGRGPAARGVKVSWRADGERTRIELSGSGRVLLGLILDGGAMDVRVDGGSVLETGPCRAGGVTRSWTWVS >Mature_237_residues TTQQNGKPITLQPFTIPRLPFRARRPHRHGLRTVPHALHPARARSHARLHPRRDRGPLSGQLLIARRVLFPYPPVPTTLQ AEIERPTNYRLNGKQVSFWVPAPDVKYEVRSMVKANGQLSFQHVQGVSERQGIVTVELQGDPEFVGVLLRQPPRVAYGVR DRVRLSLRGRGPAARGVKVSWRADGERTRIELSGSGRVLLGLILDGGAMDVRVDGGSVLETGPCRAGGVTRSWTWVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26479; Mature: 26348
Theoretical pI: Translated: 12.15; Mature: 12.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQQNGKPITLQPFTIPRLPFRARRPHRHGLRTVPHALHPARARSHARLHPRRDRGPLS CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHCCHHCCCHHHCCCCCCCCCCCCCCCC GQLLIARRVLFPYPPVPTTLQAEIERPTNYRLNGKQVSFWVPAPDVKYEVRSMVKANGQL CEEEEEEHHHCCCCCCCCCEEEEECCCCCEEECCEEEEEEECCCCCHHHHHHHHHCCCCE SFQHVQGVSERQGIVTVELQGDPEFVGVLLRQPPRVAYGVRDRVRLSLRGRGPAARGVKV EEHHHCCCCHHCCEEEEEECCCCCEEEHEECCCCCEEECCCCEEEEEEECCCCCCCCEEE SWRADGERTRIELSGSGRVLLGLILDGGAMDVRVDGGSVLETGPCRAGGVTRSWTWVS EEECCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCEEEECC >Mature Secondary Structure TTQQNGKPITLQPFTIPRLPFRARRPHRHGLRTVPHALHPARARSHARLHPRRDRGPLS CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHCCHHCCCHHHCCCCCCCCCCCCCCCC GQLLIARRVLFPYPPVPTTLQAEIERPTNYRLNGKQVSFWVPAPDVKYEVRSMVKANGQL CEEEEEEHHHCCCCCCCCCEEEEECCCCCEEECCEEEEEEECCCCCHHHHHHHHHCCCCE SFQHVQGVSERQGIVTVELQGDPEFVGVLLRQPPRVAYGVRDRVRLSLRGRGPAARGVKV EEHHHCCCCHHCCEEEEEECCCCCEEEHEECCCCCEEECCCCEEEEEEECCCCCCCCEEE SWRADGERTRIELSGSGRVLLGLILDGGAMDVRVDGGSVLETGPCRAGGVTRSWTWVS EEECCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA