Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093752

Identifier: 20093752

GI number: 20093752

Start: 302397

End: 303113

Strand: Direct

Name: 20093752

Synonym: MK0312

Alternate gene names: NA

Gene position: 302397-303113 (Clockwise)

Preceding gene: 20093747

Following gene: 20093753

Centisome position: 17.84

GC content: 66.53

Gene sequence:

>717_bases
GTGACCACCCAGCAGAACGGAAAGCCGATAACCCTACAACCATTCACCATTCCGCGACTCCCATTTCGTGCGCGCCGACC
TCACCGGCACGGACTACGGACCGTACCACACGCCCTACACCCGGCTCGCGCCCGGAGCCACGCTCGACTTCACCCTCGAC
GTGACCGCGGACCGCTCTCCGGGCAGCTTCTGATCGCCCGACGAGTACTCTTCCCCTACCCACCCGTGCCCACCACCCTC
CAGGCCGAGATCGAACGCCCCACCAACTACCGCCTGAACGGGAAGCAGGTATCGTTCTGGGTCCCCGCCCCGGATGTGAA
GTACGAGGTGCGGAGCATGGTGAAAGCGAACGGTCAGCTCTCGTTCCAGCACGTGCAGGGTGTGAGCGAGCGGCAGGGGA
TCGTCACGGTCGAGCTGCAAGGCGACCCGGAGTTCGTGGGAGTCCTCCTCAGGCAACCACCGCGCGTGGCGTACGGGGTG
CGAGACCGAGTACGACTCTCGCTGCGCGGTCGTGGGCCGGCCGCCCGGGGTGTAAAGGTGTCCTGGCGTGCGGACGGTGA
GCGGACGCGGATCGAGTTGAGTGGTAGTGGGCGCGTTCTCCTTGGGCTGATCCTGGACGGTGGAGCGATGGACGTGCGCG
TGGATGGTGGTAGCGTGCTCGAGACGGGACCCTGCCGAGCGGGCGGGGTTACGCGATCGTGGACGTGGGTGTCGTGA

Upstream 100 bases:

>100_bases
GCGCCCGAACTCACCCACTTCCTCGAACCACTGAAACTCGAACATCACCTACCTCAACTGGACCCACCTCCACTTCCCCG
ACCGCGACCTCGACCAGCAC

Downstream 100 bases:

>100_bases
GCAGGGAGCGCGTGCTGGTCGTGCACTCCACCTCGCGCGTGGTGGACGTGCTCGCGCGCGTGGTGCCCGCACCGAGCGAG
GGCGGGGTGCGGTAGGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTTQQNGKPITLQPFTIPRLPFRARRPHRHGLRTVPHALHPARARSHARLHPRRDRGPLSGQLLIARRVLFPYPPVPTTL
QAEIERPTNYRLNGKQVSFWVPAPDVKYEVRSMVKANGQLSFQHVQGVSERQGIVTVELQGDPEFVGVLLRQPPRVAYGV
RDRVRLSLRGRGPAARGVKVSWRADGERTRIELSGSGRVLLGLILDGGAMDVRVDGGSVLETGPCRAGGVTRSWTWVS

Sequences:

>Translated_238_residues
MTTQQNGKPITLQPFTIPRLPFRARRPHRHGLRTVPHALHPARARSHARLHPRRDRGPLSGQLLIARRVLFPYPPVPTTL
QAEIERPTNYRLNGKQVSFWVPAPDVKYEVRSMVKANGQLSFQHVQGVSERQGIVTVELQGDPEFVGVLLRQPPRVAYGV
RDRVRLSLRGRGPAARGVKVSWRADGERTRIELSGSGRVLLGLILDGGAMDVRVDGGSVLETGPCRAGGVTRSWTWVS
>Mature_237_residues
TTQQNGKPITLQPFTIPRLPFRARRPHRHGLRTVPHALHPARARSHARLHPRRDRGPLSGQLLIARRVLFPYPPVPTTLQ
AEIERPTNYRLNGKQVSFWVPAPDVKYEVRSMVKANGQLSFQHVQGVSERQGIVTVELQGDPEFVGVLLRQPPRVAYGVR
DRVRLSLRGRGPAARGVKVSWRADGERTRIELSGSGRVLLGLILDGGAMDVRVDGGSVLETGPCRAGGVTRSWTWVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26479; Mature: 26348

Theoretical pI: Translated: 12.15; Mature: 12.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQQNGKPITLQPFTIPRLPFRARRPHRHGLRTVPHALHPARARSHARLHPRRDRGPLS
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHCCHHCCCHHHCCCCCCCCCCCCCCCC
GQLLIARRVLFPYPPVPTTLQAEIERPTNYRLNGKQVSFWVPAPDVKYEVRSMVKANGQL
CEEEEEEHHHCCCCCCCCCEEEEECCCCCEEECCEEEEEEECCCCCHHHHHHHHHCCCCE
SFQHVQGVSERQGIVTVELQGDPEFVGVLLRQPPRVAYGVRDRVRLSLRGRGPAARGVKV
EEHHHCCCCHHCCEEEEEECCCCCEEEHEECCCCCEEECCCCEEEEEEECCCCCCCCEEE
SWRADGERTRIELSGSGRVLLGLILDGGAMDVRVDGGSVLETGPCRAGGVTRSWTWVS
EEECCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCEEEECC
>Mature Secondary Structure 
TTQQNGKPITLQPFTIPRLPFRARRPHRHGLRTVPHALHPARARSHARLHPRRDRGPLS
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHCCHHCCCHHHCCCCCCCCCCCCCCCC
GQLLIARRVLFPYPPVPTTLQAEIERPTNYRLNGKQVSFWVPAPDVKYEVRSMVKANGQL
CEEEEEEHHHCCCCCCCCCEEEEECCCCCEEECCEEEEEEECCCCCHHHHHHHHHCCCCE
SFQHVQGVSERQGIVTVELQGDPEFVGVLLRQPPRVAYGVRDRVRLSLRGRGPAARGVKV
EEHHHCCCCHHCCEEEEEECCCCCEEEHEECCCCCEEECCCCEEEEEEECCCCCCCCEEE
SWRADGERTRIELSGSGRVLLGLILDGGAMDVRVDGGSVLETGPCRAGGVTRSWTWVS
EEECCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA