Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is FwdF_1 [H]

Identifier: 20093747

GI number: 20093747

Start: 296467

End: 297540

Strand: Direct

Name: FwdF_1 [H]

Synonym: MK0307

Alternate gene names: 20093747

Gene position: 296467-297540 (Clockwise)

Preceding gene: 20093746

Following gene: 20093752

Centisome position: 17.49

GC content: 67.41

Gene sequence:

>1074_bases
ATGGCGGAGGTCAGGCTCGAGCCCGTGAAGGAGGTGTCCCCGCCGCTGCTGCGCGTGGTCAGGAAGGGCGTCGAGGAGAG
GGAACTCGTGATTAACACGTCCAAATGCGCCGCCTGCGGGATCTGCGAGGCGGCCTGCCCCGTGGGCGCCATCTCCGTGG
CACCGCCGTCCGCCGTCGTGCGCAAGGGAGAGGACCCGATCGACGTCGACGAGAGCAAGTGCGTCCTCTGCGGAATCTGC
GCCTTCGTGTGCCCGTACGACGTCATCCAGCTGCTCGTCAACGGGAAGCCCATGACCGAGGCCGGGCTGCCCAATCTTCC
GAAGTCGGTGGAGGTGGACGAGGAGGAGTGCGTGTACTGCTCCCTGTGCGCCGACACCTGCCCGCAGGAGGCCATCACGG
TCGAGCGCGAGGTCCCGACGCCCGGTGATCTCGTGATGGGAGAGATCGAGATCGACGAGGAGAAGTGTATCTACTGTAAG
GCCTGCGAGGAGGCGTGCCCGGCCGACGCCATCACGGTCGAGCGACCGAAGCCCAGCGCCGCGGATCCCGAGCCCGAGTT
CACCATCGAGGTCGACGAGGACAAGTGCGTGTACTGCGGTGTGTGCATGAGGACGTGCCCGGTGGACGCGATCAAGGTCG
GCTGTATGGTCTGCTACGGTACCACCCGCGGCGAGATCCCGGCGAAGGGCGAGGTCGACGGGTCCGTCGACGTCGACCCG
AGCTCCTGCGTGTACTGCGGGTGGTGCGGCTTCGTCTGCCCGGTAGACGCCATCGAGGTGATCAAGCCGTACGAGGGCAC
CCTTGAGGTCGACGACGAGGAGTGCGTCGGCTGCGGACTGTGCGTCGAGGTGTGCCCGTGCGGCGCGCTGGAGTTCGAGA
AGGGCGGCAAGGCCGGCAAGACCAAGATCGTGGCGCACCCGGAGACCTGCGCCTACTGCGGAGCGTGCGCCCGGGCGTGT
CCGGTGAACGCCATCACCGTCGTCCGTGAGGGCGTCACGGCGATGCCGGAGCTGCCCACCAAGGCCTGGAAGAAGGCCCT
GGACCGCGTCCTAGGTCCCGTGGAGAAGGAGTAG

Upstream 100 bases:

>100_bases
CACTGATAAGCCTTCCCATCGCCCCCGTCCCGACAACCCGATTTATAATAGCCGGCGTCGGAACAACGAGACGAACGCGA
TTTACTTGGGGGAAACACAC

Downstream 100 bases:

>100_bases
CTTCCCTCCCGTCCGACCTGATTCCTTCCGCGGTGAGTAGGGATAGAAACGGAGTCGAAGAACTCGAGAACGGCTTACCG
TGAAACGGAAACGGTACGGG

Product: formylmethanofuran dehydrogenase subunit F, ferredoxin containing

Products: CO2; methanofuran; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAEVRLEPVKEVSPPLLRVVRKGVEERELVINTSKCAACGICEAACPVGAISVAPPSAVVRKGEDPIDVDESKCVLCGIC
AFVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYCSLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCK
ACEEACPADAITVERPKPSAADPEPEFTIEVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDP
SSCVYCGWCGFVCPVDAIEVIKPYEGTLEVDDEECVGCGLCVEVCPCGALEFEKGGKAGKTKIVAHPETCAYCGACARAC
PVNAITVVREGVTAMPELPTKAWKKALDRVLGPVEKE

Sequences:

>Translated_357_residues
MAEVRLEPVKEVSPPLLRVVRKGVEERELVINTSKCAACGICEAACPVGAISVAPPSAVVRKGEDPIDVDESKCVLCGIC
AFVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYCSLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCK
ACEEACPADAITVERPKPSAADPEPEFTIEVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDP
SSCVYCGWCGFVCPVDAIEVIKPYEGTLEVDDEECVGCGLCVEVCPCGALEFEKGGKAGKTKIVAHPETCAYCGACARAC
PVNAITVVREGVTAMPELPTKAWKKALDRVLGPVEKE
>Mature_356_residues
AEVRLEPVKEVSPPLLRVVRKGVEERELVINTSKCAACGICEAACPVGAISVAPPSAVVRKGEDPIDVDESKCVLCGICA
FVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYCSLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCKA
CEEACPADAITVERPKPSAADPEPEFTIEVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDPS
SCVYCGWCGFVCPVDAIEVIKPYEGTLEVDDEECVGCGLCVEVCPCGALEFEKGGKAGKTKIVAHPETCAYCGACARACP
VNAITVVREGVTAMPELPTKAWKKALDRVLGPVEKE

Specific function: Involved In Electron Transfer. [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 8 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR016459 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: 1.2.99.5

Molecular weight: Translated: 38003; Mature: 37872

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
9.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
11.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVRLEPVKEVSPPLLRVVRKGVEERELVINTSKCAACGICEAACPVGAISVAPPSAVV
CCCCCCCCHHHCCHHHHHHHHCCCCCCEEEEECCCHHHHCCHHHHCCCCEEECCCCHHHH
RKGEDPIDVDESKCVLCGICAFVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYC
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCEEE
SLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCKACEEACPADAITVERPKPSA
EEHHHCCCHHHEEEECCCCCCCCEEEEEEEECCCCEEEEEHHHHHCCCCCEEEECCCCCC
ADPEPEFTIEVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDP
CCCCCCEEEEECCCCEEEEEHHHHHCCHHHHEECEEEEECCCCCCCCCCCCCCCCEECCC
SSCVYCGWCGFVCPVDAIEVIKPYEGTLEVDDEECVGCGLCVEVCPCGALEFEKGGKAGK
CCEEEEECCCHHCCCCHHHHHCCCCCCEEECCHHHCCCCHHHHHCCCCCEEECCCCCCCC
TKIVAHPETCAYCGACARACPVNAITVVREGVTAMPELPTKAWKKALDRVLGPVEKE
EEEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AEVRLEPVKEVSPPLLRVVRKGVEERELVINTSKCAACGICEAACPVGAISVAPPSAVV
CCCCCCCHHHCCHHHHHHHHCCCCCCEEEEECCCHHHHCCHHHHCCCCEEECCCCHHHH
RKGEDPIDVDESKCVLCGICAFVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYC
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCEEE
SLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCKACEEACPADAITVERPKPSA
EEHHHCCCHHHEEEECCCCCCCCEEEEEEEECCCCEEEEEHHHHHCCCCCEEEECCCCCC
ADPEPEFTIEVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDP
CCCCCCEEEEECCCCEEEEEHHHHHCCHHHHEECEEEEECCCCCCCCCCCCCCCCEECCC
SSCVYCGWCGFVCPVDAIEVIKPYEGTLEVDDEECVGCGLCVEVCPCGALEFEKGGKAGK
CCEEEEECCCHHCCCCHHHHHCCCCCCEEECCHHHCCCCHHHHHCCCCCEEECCCCCCCC
TKIVAHPETCAYCGACARACPVNAITVVREGVTAMPELPTKAWKKALDRVLGPVEKE
EEEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formylmethanofuran; H2O; acceptor

Specific reaction: formylmethanofuran + H2O + acceptor = CO2 + methanofuran + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]