| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is FwdF_1 [H]
Identifier: 20093747
GI number: 20093747
Start: 296467
End: 297540
Strand: Direct
Name: FwdF_1 [H]
Synonym: MK0307
Alternate gene names: 20093747
Gene position: 296467-297540 (Clockwise)
Preceding gene: 20093746
Following gene: 20093752
Centisome position: 17.49
GC content: 67.41
Gene sequence:
>1074_bases ATGGCGGAGGTCAGGCTCGAGCCCGTGAAGGAGGTGTCCCCGCCGCTGCTGCGCGTGGTCAGGAAGGGCGTCGAGGAGAG GGAACTCGTGATTAACACGTCCAAATGCGCCGCCTGCGGGATCTGCGAGGCGGCCTGCCCCGTGGGCGCCATCTCCGTGG CACCGCCGTCCGCCGTCGTGCGCAAGGGAGAGGACCCGATCGACGTCGACGAGAGCAAGTGCGTCCTCTGCGGAATCTGC GCCTTCGTGTGCCCGTACGACGTCATCCAGCTGCTCGTCAACGGGAAGCCCATGACCGAGGCCGGGCTGCCCAATCTTCC GAAGTCGGTGGAGGTGGACGAGGAGGAGTGCGTGTACTGCTCCCTGTGCGCCGACACCTGCCCGCAGGAGGCCATCACGG TCGAGCGCGAGGTCCCGACGCCCGGTGATCTCGTGATGGGAGAGATCGAGATCGACGAGGAGAAGTGTATCTACTGTAAG GCCTGCGAGGAGGCGTGCCCGGCCGACGCCATCACGGTCGAGCGACCGAAGCCCAGCGCCGCGGATCCCGAGCCCGAGTT CACCATCGAGGTCGACGAGGACAAGTGCGTGTACTGCGGTGTGTGCATGAGGACGTGCCCGGTGGACGCGATCAAGGTCG GCTGTATGGTCTGCTACGGTACCACCCGCGGCGAGATCCCGGCGAAGGGCGAGGTCGACGGGTCCGTCGACGTCGACCCG AGCTCCTGCGTGTACTGCGGGTGGTGCGGCTTCGTCTGCCCGGTAGACGCCATCGAGGTGATCAAGCCGTACGAGGGCAC CCTTGAGGTCGACGACGAGGAGTGCGTCGGCTGCGGACTGTGCGTCGAGGTGTGCCCGTGCGGCGCGCTGGAGTTCGAGA AGGGCGGCAAGGCCGGCAAGACCAAGATCGTGGCGCACCCGGAGACCTGCGCCTACTGCGGAGCGTGCGCCCGGGCGTGT CCGGTGAACGCCATCACCGTCGTCCGTGAGGGCGTCACGGCGATGCCGGAGCTGCCCACCAAGGCCTGGAAGAAGGCCCT GGACCGCGTCCTAGGTCCCGTGGAGAAGGAGTAG
Upstream 100 bases:
>100_bases CACTGATAAGCCTTCCCATCGCCCCCGTCCCGACAACCCGATTTATAATAGCCGGCGTCGGAACAACGAGACGAACGCGA TTTACTTGGGGGAAACACAC
Downstream 100 bases:
>100_bases CTTCCCTCCCGTCCGACCTGATTCCTTCCGCGGTGAGTAGGGATAGAAACGGAGTCGAAGAACTCGAGAACGGCTTACCG TGAAACGGAAACGGTACGGG
Product: formylmethanofuran dehydrogenase subunit F, ferredoxin containing
Products: CO2; methanofuran; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MAEVRLEPVKEVSPPLLRVVRKGVEERELVINTSKCAACGICEAACPVGAISVAPPSAVVRKGEDPIDVDESKCVLCGIC AFVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYCSLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCK ACEEACPADAITVERPKPSAADPEPEFTIEVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDP SSCVYCGWCGFVCPVDAIEVIKPYEGTLEVDDEECVGCGLCVEVCPCGALEFEKGGKAGKTKIVAHPETCAYCGACARAC PVNAITVVREGVTAMPELPTKAWKKALDRVLGPVEKE
Sequences:
>Translated_357_residues MAEVRLEPVKEVSPPLLRVVRKGVEERELVINTSKCAACGICEAACPVGAISVAPPSAVVRKGEDPIDVDESKCVLCGIC AFVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYCSLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCK ACEEACPADAITVERPKPSAADPEPEFTIEVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDP SSCVYCGWCGFVCPVDAIEVIKPYEGTLEVDDEECVGCGLCVEVCPCGALEFEKGGKAGKTKIVAHPETCAYCGACARAC PVNAITVVREGVTAMPELPTKAWKKALDRVLGPVEKE >Mature_356_residues AEVRLEPVKEVSPPLLRVVRKGVEERELVINTSKCAACGICEAACPVGAISVAPPSAVVRKGEDPIDVDESKCVLCGICA FVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYCSLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCKA CEEACPADAITVERPKPSAADPEPEFTIEVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDPS SCVYCGWCGFVCPVDAIEVIKPYEGTLEVDDEECVGCGLCVEVCPCGALEFEKGGKAGKTKIVAHPETCAYCGACARACP VNAITVVREGVTAMPELPTKAWKKALDRVLGPVEKE
Specific function: Involved In Electron Transfer. [C]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 8 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR016459 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: 1.2.99.5
Molecular weight: Translated: 38003; Mature: 37872
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 9.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 11.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVRLEPVKEVSPPLLRVVRKGVEERELVINTSKCAACGICEAACPVGAISVAPPSAVV CCCCCCCCHHHCCHHHHHHHHCCCCCCEEEEECCCHHHHCCHHHHCCCCEEECCCCHHHH RKGEDPIDVDESKCVLCGICAFVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYC HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCEEE SLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCKACEEACPADAITVERPKPSA EEHHHCCCHHHEEEECCCCCCCCEEEEEEEECCCCEEEEEHHHHHCCCCCEEEECCCCCC ADPEPEFTIEVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDP CCCCCCEEEEECCCCEEEEEHHHHHCCHHHHEECEEEEECCCCCCCCCCCCCCCCEECCC SSCVYCGWCGFVCPVDAIEVIKPYEGTLEVDDEECVGCGLCVEVCPCGALEFEKGGKAGK CCEEEEECCCHHCCCCHHHHHCCCCCCEEECCHHHCCCCHHHHHCCCCCEEECCCCCCCC TKIVAHPETCAYCGACARACPVNAITVVREGVTAMPELPTKAWKKALDRVLGPVEKE EEEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AEVRLEPVKEVSPPLLRVVRKGVEERELVINTSKCAACGICEAACPVGAISVAPPSAVV CCCCCCCHHHCCHHHHHHHHCCCCCCEEEEECCCHHHHCCHHHHCCCCEEECCCCHHHH RKGEDPIDVDESKCVLCGICAFVCPYDVIQLLVNGKPMTEAGLPNLPKSVEVDEEECVYC HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCEEE SLCADTCPQEAITVEREVPTPGDLVMGEIEIDEEKCIYCKACEEACPADAITVERPKPSA EEHHHCCCHHHEEEECCCCCCCCEEEEEEEECCCCEEEEEHHHHHCCCCCEEEECCCCCC ADPEPEFTIEVDEDKCVYCGVCMRTCPVDAIKVGCMVCYGTTRGEIPAKGEVDGSVDVDP CCCCCCEEEEECCCCEEEEEHHHHHCCHHHHEECEEEEECCCCCCCCCCCCCCCCEECCC SSCVYCGWCGFVCPVDAIEVIKPYEGTLEVDDEECVGCGLCVEVCPCGALEFEKGGKAGK CCEEEEECCCHHCCCCHHHHHCCCCCCEEECCHHHCCCCHHHHHCCCCCEEECCCCCCCC TKIVAHPETCAYCGACARACPVNAITVVREGVTAMPELPTKAWKKALDRVLGPVEKE EEEEECCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: formylmethanofuran; H2O; acceptor
Specific reaction: formylmethanofuran + H2O + acceptor = CO2 + methanofuran + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]