| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093719
Identifier: 20093719
GI number: 20093719
Start: 269014
End: 271053
Strand: Direct
Name: 20093719
Synonym: MK0279
Alternate gene names: NA
Gene position: 269014-271053 (Clockwise)
Preceding gene: 20093718
Following gene: 20093722
Centisome position: 15.87
GC content: 47.06
Gene sequence:
>2040_bases TTGAGTGACCCCGGGCTTTTCATGCTGATCTTACTAGTCCTGTTATTAGCGGTGGCCTCTTTGCCCGCGGGTTCTGTGGT TTTGGCCTCGGCCTTAGCCCCCGTGGCGGTGGTCGGCGGACTAGCACTCGAGTACGGCCTCGTGGACCCGAGGATCGTAC CCGCGTTCGGACTACTCGCGGTCCCCGGACTCATCCTAGGACTCCGAACAGCCCGAAAATACCCCAAACAACACCTACGT CATAGACTAACTATAGCAGTAATCCTGCTGACGGCATATCTCTCAGTGGACTTGACCTTATACGCTTTCAAAGGGAATAT CGGCGCTACTATGGGTGATCCTTCAAGACATGCCTCTTACGCGCTAACGTTGTTAACCGCGGGTGAGCCCCCGGTTTTCT ACGATACACTGAGACAGGAGTACCGTCCAGTCCATTATCCGTCCGGTCTCGGTCACATCGCGATTACGGAGTCGATCGTA TCGTGCCTGTACCATCCGAAGGATGTACAGGAGGCCGCAAGCTGGCAGGTTCAATTCGGATCAGTATTCCTTGAACTACT TGAACATCACTTGGACGCGGCGTTGATAACGTCCTCGATAGTCGATCTTCTGTTGATCGCACGCGGACGGTTACCAATCT ATATAATACCCCCTCTAGCATACATAACATACCTAACATGCACCGCACAATATGCAGAATTCATACCGTTCTTCCAATCA CTAGCAATGCTTGCCGCCTCGGCAGTGGCACTTATACTCAATTCACGATTGCTATCAGGGCTTCTCGCACTAGGAGCCAT AGCAATCCATGCCTATGGTGTTATAATTGTAACAACGTTAATTCTAGCTTTACTATGGGCTAAGAAAACCAGAATTACAA CTGTAACCCCAATACTTTTAGGAACTATAATCGGAGCTATTATGCAATATCCCTATGTACACTGGAGCGTAATGACATAT TTCCCACGCTATCCGGCCCACCCTAATCATCTACCGCCAGATCGTATACTTAGCCCAGTAGCGTGTCTATTACAGTTCTT TTTCACAGCATTTGCAGCGTATCCCATGATTCTATTCCCTACAACTAATAGCTTACCTTATGTGTTGCCATTTACAGTAA TCAATGTTTTAATCATTATTAAAGTCCGTAAATTACTTCCCTCTGTTCTTAGAGTAATGTGGATAACATGTATAGTTACA ATTCTAGCATTAGCTGTGGTTTCCGGAAGTATAGTCGGAGGACGTCTTTTAGTTGTAGTTCCATTACTAACAGCTATGAG TTTAGTTCTACCAGCAGCAAATAGAAACTTATTAGCACTAGGAGCATTATTTGGATATTGTGCGCTAACTATTCATTGGT GGCTTGCAATCATAATACATGGAAATGAAGGTATTAGTACACTACCGGTTTGGGTTCTAAAAGAACATTGGAATATATTC TATAAATCCCTTTGTAATAAAGACGTTATAGCCACTCTACCCGAAGGCTTGCTCCCATTTACATGTACATGGAAACCACG TGAAGTTGCTTACGTAGTTCGAACGTTCCCTGAACCTTACACCTCTATACTGTTGACAGCCAAGGAGGGTAGTGAGATAT TACTATACGCACCTCCGGTGCGAGCTGAAAGAGGATACATTGTAAAGAAGTTGCCACCTCCGGGGCGCGTCTGGGTGGCC GGTAACCGCGCTGGGTCACTCCGATGTAACGTCCTGATCGGAGCGGAACGGTACAACCGTCAGGTGATAATACACGTTAA CGTGGTTAACTACAGTTGGGTACCTATACCCACAATAAACATCAAAGGAAAGCTCCGGAAGAGGGCGATAGTGCTCTCAA CACCGAAATCGAGCACGTTACCGGCTATCAATGTCCACCGTATTCCGGAGGGTTTCCTTGTCAGGATCTCGTATTCGCAC GGTGTGAGAGTTGTGAAGATAACGATCTCCGGGGCCAGATGGGTTGGTGATAAACTGGTGTTCCACGGATCTCTGAGGGA CCTCATCGCGAACATACGAGTCACCGGCGACTTAGTCTGA
Upstream 100 bases:
>100_bases CTGGTGTTCCACGGATCTCTGAGGGACCTCATCGCGAACATACGAGTCACCGGCGACTTGGTTTAAGAGTGCGTGTGAAC GTGCCGTAGGGGGCCAGTTA
Downstream 100 bases:
>100_bases CGGTTGAGAGGGGAACTAGGTCGGGTAAGGCCCCTGTTCGTCATCGCGTAGCTCCGACGAAACCTCCCTCCTCATCCCCT CGAGTTCGTTCGGGGTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 679; Mature: 678
Protein sequence:
>679_residues MSDPGLFMLILLVLLLAVASLPAGSVVLASALAPVAVVGGLALEYGLVDPRIVPAFGLLAVPGLILGLRTARKYPKQHLR HRLTIAVILLTAYLSVDLTLYAFKGNIGATMGDPSRHASYALTLLTAGEPPVFYDTLRQEYRPVHYPSGLGHIAITESIV SCLYHPKDVQEAASWQVQFGSVFLELLEHHLDAALITSSIVDLLLIARGRLPIYIIPPLAYITYLTCTAQYAEFIPFFQS LAMLAASAVALILNSRLLSGLLALGAIAIHAYGVIIVTTLILALLWAKKTRITTVTPILLGTIIGAIMQYPYVHWSVMTY FPRYPAHPNHLPPDRILSPVACLLQFFFTAFAAYPMILFPTTNSLPYVLPFTVINVLIIIKVRKLLPSVLRVMWITCIVT ILALAVVSGSIVGGRLLVVVPLLTAMSLVLPAANRNLLALGALFGYCALTIHWWLAIIIHGNEGISTLPVWVLKEHWNIF YKSLCNKDVIATLPEGLLPFTCTWKPREVAYVVRTFPEPYTSILLTAKEGSEILLYAPPVRAERGYIVKKLPPPGRVWVA GNRAGSLRCNVLIGAERYNRQVIIHVNVVNYSWVPIPTINIKGKLRKRAIVLSTPKSSTLPAINVHRIPEGFLVRISYSH GVRVVKITISGARWVGDKLVFHGSLRDLIANIRVTGDLV
Sequences:
>Translated_679_residues MSDPGLFMLILLVLLLAVASLPAGSVVLASALAPVAVVGGLALEYGLVDPRIVPAFGLLAVPGLILGLRTARKYPKQHLR HRLTIAVILLTAYLSVDLTLYAFKGNIGATMGDPSRHASYALTLLTAGEPPVFYDTLRQEYRPVHYPSGLGHIAITESIV SCLYHPKDVQEAASWQVQFGSVFLELLEHHLDAALITSSIVDLLLIARGRLPIYIIPPLAYITYLTCTAQYAEFIPFFQS LAMLAASAVALILNSRLLSGLLALGAIAIHAYGVIIVTTLILALLWAKKTRITTVTPILLGTIIGAIMQYPYVHWSVMTY FPRYPAHPNHLPPDRILSPVACLLQFFFTAFAAYPMILFPTTNSLPYVLPFTVINVLIIIKVRKLLPSVLRVMWITCIVT ILALAVVSGSIVGGRLLVVVPLLTAMSLVLPAANRNLLALGALFGYCALTIHWWLAIIIHGNEGISTLPVWVLKEHWNIF YKSLCNKDVIATLPEGLLPFTCTWKPREVAYVVRTFPEPYTSILLTAKEGSEILLYAPPVRAERGYIVKKLPPPGRVWVA GNRAGSLRCNVLIGAERYNRQVIIHVNVVNYSWVPIPTINIKGKLRKRAIVLSTPKSSTLPAINVHRIPEGFLVRISYSH GVRVVKITISGARWVGDKLVFHGSLRDLIANIRVTGDLV >Mature_678_residues SDPGLFMLILLVLLLAVASLPAGSVVLASALAPVAVVGGLALEYGLVDPRIVPAFGLLAVPGLILGLRTARKYPKQHLRH RLTIAVILLTAYLSVDLTLYAFKGNIGATMGDPSRHASYALTLLTAGEPPVFYDTLRQEYRPVHYPSGLGHIAITESIVS CLYHPKDVQEAASWQVQFGSVFLELLEHHLDAALITSSIVDLLLIARGRLPIYIIPPLAYITYLTCTAQYAEFIPFFQSL AMLAASAVALILNSRLLSGLLALGAIAIHAYGVIIVTTLILALLWAKKTRITTVTPILLGTIIGAIMQYPYVHWSVMTYF PRYPAHPNHLPPDRILSPVACLLQFFFTAFAAYPMILFPTTNSLPYVLPFTVINVLIIIKVRKLLPSVLRVMWITCIVTI LALAVVSGSIVGGRLLVVVPLLTAMSLVLPAANRNLLALGALFGYCALTIHWWLAIIIHGNEGISTLPVWVLKEHWNIFY KSLCNKDVIATLPEGLLPFTCTWKPREVAYVVRTFPEPYTSILLTAKEGSEILLYAPPVRAERGYIVKKLPPPGRVWVAG NRAGSLRCNVLIGAERYNRQVIIHVNVVNYSWVPIPTINIKGKLRKRAIVLSTPKSSTLPAINVHRIPEGFLVRISYSHG VRVVKITISGARWVGDKLVFHGSLRDLIANIRVTGDLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74495; Mature: 74364
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPGLFMLILLVLLLAVASLPAGSVVLASALAPVAVVGGLALEYGLVDPRIVPAFGLLA CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VPGLILGLRTARKYPKQHLRHRLTIAVILLTAYLSVDLTLYAFKGNIGATMGDPSRHASY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCEE ALTLLTAGEPPVFYDTLRQEYRPVHYPSGLGHIAITESIVSCLYHPKDVQEAASWQVQFG EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SVFLELLEHHLDAALITSSIVDLLLIARGRLPIYIIPPLAYITYLTCTAQYAEFIPFFQS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH LAMLAASAVALILNSRLLSGLLALGAIAIHAYGVIIVTTLILALLWAKKTRITTVTPILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH GTIIGAIMQYPYVHWSVMTYFPRYPAHPNHLPPDRILSPVACLLQFFFTAFAAYPMILFP HHHHHHHHHCCCCEEEHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE TTNSLPYVLPFTVINVLIIIKVRKLLPSVLRVMWITCIVTILALAVVSGSIVGGRLLVVV CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH PLLTAMSLVLPAANRNLLALGALFGYCALTIHWWLAIIIHGNEGISTLPVWVLKEHWNIF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHH YKSLCNKDVIATLPEGLLPFTCTWKPREVAYVVRTFPEPYTSILLTAKEGSEILLYAPPV HHHHCCCCHHHHCCCCCCCEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCC RAERGYIVKKLPPPGRVWVAGNRAGSLRCNVLIGAERYNRQVIIHVNVVNYSWVPIPTIN CCCCCEEEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEEEEEEEEECEEEE IKGKLRKRAIVLSTPKSSTLPAINVHRIPEGFLVRISYSHGVRVVKITISGARWVGDKLV CCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEEEECCEECCCCEE FHGSLRDLIANIRVTGDLV EECCHHHHHHHHEEECCCC >Mature Secondary Structure SDPGLFMLILLVLLLAVASLPAGSVVLASALAPVAVVGGLALEYGLVDPRIVPAFGLLA CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH VPGLILGLRTARKYPKQHLRHRLTIAVILLTAYLSVDLTLYAFKGNIGATMGDPSRHASY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCEE ALTLLTAGEPPVFYDTLRQEYRPVHYPSGLGHIAITESIVSCLYHPKDVQEAASWQVQFG EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SVFLELLEHHLDAALITSSIVDLLLIARGRLPIYIIPPLAYITYLTCTAQYAEFIPFFQS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH LAMLAASAVALILNSRLLSGLLALGAIAIHAYGVIIVTTLILALLWAKKTRITTVTPILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH GTIIGAIMQYPYVHWSVMTYFPRYPAHPNHLPPDRILSPVACLLQFFFTAFAAYPMILFP HHHHHHHHHCCCCEEEHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE TTNSLPYVLPFTVINVLIIIKVRKLLPSVLRVMWITCIVTILALAVVSGSIVGGRLLVVV CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH PLLTAMSLVLPAANRNLLALGALFGYCALTIHWWLAIIIHGNEGISTLPVWVLKEHWNIF HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHH YKSLCNKDVIATLPEGLLPFTCTWKPREVAYVVRTFPEPYTSILLTAKEGSEILLYAPPV HHHHCCCCHHHHCCCCCCCEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCC RAERGYIVKKLPPPGRVWVAGNRAGSLRCNVLIGAERYNRQVIIHVNVVNYSWVPIPTIN CCCCCEEEEECCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEEEEEEEEEEEECEEEE IKGKLRKRAIVLSTPKSSTLPAINVHRIPEGFLVRISYSHGVRVVKITISGARWVGDKLV CCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEEEECCEECCCCEE FHGSLRDLIANIRVTGDLV EECCHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA