| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093718
Identifier: 20093718
GI number: 20093718
Start: 266967
End: 268979
Strand: Direct
Name: 20093718
Synonym: MK0278
Alternate gene names: NA
Gene position: 266967-268979 (Clockwise)
Preceding gene: 20093717
Following gene: 20093719
Centisome position: 15.75
GC content: 46.05
Gene sequence:
>2013_bases TTGTGCGGTGATCCAGGGCTTCTCACGCTGGTCTTGCTCATCCTACTACTAGCGGTGGCCTCTTTGCCCGCGGGTTCTGT GGTTTTGGCCTCGGCCTTAGCCCCCGTGGCGGTGGTCGGCGGACTAGCACTCGAGTACGGCCTCGTAGATCCGAGGACCG TGCCCGTGTTCGGACTACTCGCGGTCCCCGGACTCATCCTAGGACTCCGAACAGCCCGAAAATACCCCAAACAACACCTA CGCCACAGGCTAATCATAGCGGTAATTATCACAGTGACTTTTTTTCTTTCAAATTTAACAATATACGTGTTTAAGGGAAC AGTATCTTTCGTAGCAGGCGGAGACGTACCCAGGCATGCTTCTCTAGCGTTGTCTTTCCTCACTACCGGTAAGCCTCCCG TTTTCTACGATACGTTGAGGCGGGAGTATCGTCCCGTTCATTACCCCTCGGGACTCGGACACGCGGCGATCACGGAGTCG ATCGTGTCGTTGTTATTCCATCCGAAAGATCTACGGGAAGCGGCGAGCTGGCGAGTTCAGTACGGTTCAACAATTATTGA ACTCGTTGAATACCATGTGAGCACAGCCATGATAGCATCAGCCATCATCGACATCATCCTCCTTACGCTCGGACGATTGC CTATTTTAGTAGCTACACTTGTAGCATGCGCAATATATTTGACGTATCCTGGACCGGTGCCGTTCTTTCAGTCACTAGCT ATGCTATCAGCATCGATCGTAGCTATAATTCTTAATTCACGATGGATTTCAACATTTTTAATACTAAGTGCTGTAGTAAT TCATTTCTATAGTGTGGTGGTCATGAGCTTACTTATTCCAGTTCTGATCCAAACTAGAAAACAATCCACTATATCGTTAC TCCTTGGTATGGCAACTGGAATCATTATACAATTCCCTTACGTACACTGGAGTGCGGCAGTGCATTTCCCACGTTATCCA GCCCACCCGAATCACTTACCACCAGATCGGGAGTTAGGGCCGATAGTGTACATAATACAATTTATGTTTACAGCATTTGC TGCATATCCACCGTTCATTTTCCCCAATGCTAGTGATATGCTATATACTATCCCATTTATAGCCGCTGTAATGTTAATAC TTATCAGAATTCGGAAATTATTACCGCAAGATCTCAAAATAATATGGATCATGTATATAACCACTATTGTTATCTTAGGA GTTACCTTCGGGCGATTCATTGGAAAACGATTTTTATTTACTGCACCATTGTTAACGACTTTAACTTTAGGTTTTGCAGC AGCAAATTACCACTTATTAGCGCTCAGTATACTAATTAGTTATTGCGCTTTAACTACTGATTGGTGGTACATATATTTCA TTAATACTCCACCAATCGATGTATTAGAAAAACATTGGAAACTATTCTATAATTCATTCTGCAAGGGTGAGACTATCGCT ACAGTATCAATAGGCTTACTGCCATTCACATCCACATGGAAACCACAAAAGGTAGCTCAGGTAGTTAGAACGTTCCCAGA ACCAGGTTTGCCCATATTGGTTACTGAAGAGGAAAACAACCTCACCCTAAGACTTCTACCGTTAACTCAAGTCAAAGGCA AATACATCGTGGAGAAGTTACCACCAACGAAACGTGTCTGGTCAGTCGACGACCGGGCAGGCTCATTCAGACGGAACGTC CTAGTAGCAGCGGAACGGTACGACTCACACGTCCTGACGTATGTGGCAATAATGAGCTACGGCTCGGTACCCACCGTGTT AGTCATTAAGGGGAAGACGTGGGGAGCCTCCATGGCCTTCATGACACTCATGGAGCCTACCGATGATTTATCAGTGTTTA TCAGGACGCGACATGTCCCCAACGGGTATTTAGTCAGAATCTCAGATTGGCAAGGTGTGAGGGTTATGAAGATAACGATC TCCGGGGCCAGATGGGTTGGTGATAAACTGGTGTTCCACGGATCTCTGAGGGACCTCATCGCGAACATACGAGTCACCGG CGACTTGGTTTAA
Upstream 100 bases:
>100_bases GTACTCTCGGACATCGGAGTCCCACCCTCATCACTCGAAGTGGAGCCGATCAGGGTCTATGACCACGTCCGTAGGGAGTT GAGACGGCGGGGGCTAACGG
Downstream 100 bases:
>100_bases GAGTGCGTGTGAACGTGCCGTAGGGGGCCAGTTATTGAGTGACCCCGGGCTTTTCATGCTGATCTTACTAGTCCTGTTAT TAGCGGTGGCCTCTTTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 670; Mature: 670
Protein sequence:
>670_residues MCGDPGLLTLVLLILLLAVASLPAGSVVLASALAPVAVVGGLALEYGLVDPRTVPVFGLLAVPGLILGLRTARKYPKQHL RHRLIIAVIITVTFFLSNLTIYVFKGTVSFVAGGDVPRHASLALSFLTTGKPPVFYDTLRREYRPVHYPSGLGHAAITES IVSLLFHPKDLREAASWRVQYGSTIIELVEYHVSTAMIASAIIDIILLTLGRLPILVATLVACAIYLTYPGPVPFFQSLA MLSASIVAIILNSRWISTFLILSAVVIHFYSVVVMSLLIPVLIQTRKQSTISLLLGMATGIIIQFPYVHWSAAVHFPRYP AHPNHLPPDRELGPIVYIIQFMFTAFAAYPPFIFPNASDMLYTIPFIAAVMLILIRIRKLLPQDLKIIWIMYITTIVILG VTFGRFIGKRFLFTAPLLTTLTLGFAAANYHLLALSILISYCALTTDWWYIYFINTPPIDVLEKHWKLFYNSFCKGETIA TVSIGLLPFTSTWKPQKVAQVVRTFPEPGLPILVTEEENNLTLRLLPLTQVKGKYIVEKLPPTKRVWSVDDRAGSFRRNV LVAAERYDSHVLTYVAIMSYGSVPTVLVIKGKTWGASMAFMTLMEPTDDLSVFIRTRHVPNGYLVRISDWQGVRVMKITI SGARWVGDKLVFHGSLRDLIANIRVTGDLV
Sequences:
>Translated_670_residues MCGDPGLLTLVLLILLLAVASLPAGSVVLASALAPVAVVGGLALEYGLVDPRTVPVFGLLAVPGLILGLRTARKYPKQHL RHRLIIAVIITVTFFLSNLTIYVFKGTVSFVAGGDVPRHASLALSFLTTGKPPVFYDTLRREYRPVHYPSGLGHAAITES IVSLLFHPKDLREAASWRVQYGSTIIELVEYHVSTAMIASAIIDIILLTLGRLPILVATLVACAIYLTYPGPVPFFQSLA MLSASIVAIILNSRWISTFLILSAVVIHFYSVVVMSLLIPVLIQTRKQSTISLLLGMATGIIIQFPYVHWSAAVHFPRYP AHPNHLPPDRELGPIVYIIQFMFTAFAAYPPFIFPNASDMLYTIPFIAAVMLILIRIRKLLPQDLKIIWIMYITTIVILG VTFGRFIGKRFLFTAPLLTTLTLGFAAANYHLLALSILISYCALTTDWWYIYFINTPPIDVLEKHWKLFYNSFCKGETIA TVSIGLLPFTSTWKPQKVAQVVRTFPEPGLPILVTEEENNLTLRLLPLTQVKGKYIVEKLPPTKRVWSVDDRAGSFRRNV LVAAERYDSHVLTYVAIMSYGSVPTVLVIKGKTWGASMAFMTLMEPTDDLSVFIRTRHVPNGYLVRISDWQGVRVMKITI SGARWVGDKLVFHGSLRDLIANIRVTGDLV >Mature_670_residues MCGDPGLLTLVLLILLLAVASLPAGSVVLASALAPVAVVGGLALEYGLVDPRTVPVFGLLAVPGLILGLRTARKYPKQHL RHRLIIAVIITVTFFLSNLTIYVFKGTVSFVAGGDVPRHASLALSFLTTGKPPVFYDTLRREYRPVHYPSGLGHAAITES IVSLLFHPKDLREAASWRVQYGSTIIELVEYHVSTAMIASAIIDIILLTLGRLPILVATLVACAIYLTYPGPVPFFQSLA MLSASIVAIILNSRWISTFLILSAVVIHFYSVVVMSLLIPVLIQTRKQSTISLLLGMATGIIIQFPYVHWSAAVHFPRYP AHPNHLPPDRELGPIVYIIQFMFTAFAAYPPFIFPNASDMLYTIPFIAAVMLILIRIRKLLPQDLKIIWIMYITTIVILG VTFGRFIGKRFLFTAPLLTTLTLGFAAANYHLLALSILISYCALTTDWWYIYFINTPPIDVLEKHWKLFYNSFCKGETIA TVSIGLLPFTSTWKPQKVAQVVRTFPEPGLPILVTEEENNLTLRLLPLTQVKGKYIVEKLPPTKRVWSVDDRAGSFRRNV LVAAERYDSHVLTYVAIMSYGSVPTVLVIKGKTWGASMAFMTLMEPTDDLSVFIRTRHVPNGYLVRISDWQGVRVMKITI SGARWVGDKLVFHGSLRDLIANIRVTGDLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74380; Mature: 74380
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGDPGLLTLVLLILLLAVASLPAGSVVLASALAPVAVVGGLALEYGLVDPRTVPVFGLL CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AVPGLILGLRTARKYPKQHLRHRLIIAVIITVTFFLSNLTIYVFKGTVSFVAGGDVPRHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCCCHH SLALSFLTTGKPPVFYDTLRREYRPVHYPSGLGHAAITESIVSLLFHPKDLREAASWRVQ HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH YGSTIIELVEYHVSTAMIASAIIDIILLTLGRLPILVATLVACAIYLTYPGPVPFFQSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEECCCCCHHHHHHH MLSASIVAIILNSRWISTFLILSAVVIHFYSVVVMSLLIPVLIQTRKQSTISLLLGMATG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH IIIQFPYVHWSAAVHFPRYPAHPNHLPPDRELGPIVYIIQFMFTAFAAYPPFIFPNASDM HEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH LYTIPFIAAVMLILIRIRKLLPQDLKIIWIMYITTIVILGVTFGRFIGKRFLFTAPLLTT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLGFAAANYHLLALSILISYCALTTDWWYIYFINTPPIDVLEKHWKLFYNSFCKGETIA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEE TVSIGLLPFTSTWKPQKVAQVVRTFPEPGLPILVTEEENNLTLRLLPLTQVKGKYIVEKL EEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECHHCCCCHHHHCC PPTKRVWSVDDRAGSFRRNVLVAAERYDSHVLTYVAIMSYGSVPTVLVIKGKTWGASMAF CCCCCEEECCCCCCCHHHHEEEEEHHHCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH MTLMEPTDDLSVFIRTRHVPNGYLVRISDWQGVRVMKITISGARWVGDKLVFHGSLRDLI HHHCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEEEECCCEECCCHHEEECCHHHHH ANIRVTGDLV HHHEEECCCC >Mature Secondary Structure MCGDPGLLTLVLLILLLAVASLPAGSVVLASALAPVAVVGGLALEYGLVDPRTVPVFGLL CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH AVPGLILGLRTARKYPKQHLRHRLIIAVIITVTFFLSNLTIYVFKGTVSFVAGGDVPRHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCCCHH SLALSFLTTGKPPVFYDTLRREYRPVHYPSGLGHAAITESIVSLLFHPKDLREAASWRVQ HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH YGSTIIELVEYHVSTAMIASAIIDIILLTLGRLPILVATLVACAIYLTYPGPVPFFQSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEECCCCCHHHHHHH MLSASIVAIILNSRWISTFLILSAVVIHFYSVVVMSLLIPVLIQTRKQSTISLLLGMATG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH IIIQFPYVHWSAAVHFPRYPAHPNHLPPDRELGPIVYIIQFMFTAFAAYPPFIFPNASDM HEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH LYTIPFIAAVMLILIRIRKLLPQDLKIIWIMYITTIVILGVTFGRFIGKRFLFTAPLLTT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLGFAAANYHLLALSILISYCALTTDWWYIYFINTPPIDVLEKHWKLFYNSFCKGETIA HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEE TVSIGLLPFTSTWKPQKVAQVVRTFPEPGLPILVTEEENNLTLRLLPLTQVKGKYIVEKL EEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECHHCCCCHHHHCC PPTKRVWSVDDRAGSFRRNVLVAAERYDSHVLTYVAIMSYGSVPTVLVIKGKTWGASMAF CCCCCEEECCCCCCCHHHHEEEEEHHHCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHH MTLMEPTDDLSVFIRTRHVPNGYLVRISDWQGVRVMKITISGARWVGDKLVFHGSLRDLI HHHCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEEEECCCEECCCHHEEECCHHHHH ANIRVTGDLV HHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA