Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093703

Identifier: 20093703

GI number: 20093703

Start: 251649

End: 252227

Strand: Direct

Name: 20093703

Synonym: MK0263

Alternate gene names: NA

Gene position: 251649-252227 (Clockwise)

Preceding gene: 20093702

Following gene: 20093704

Centisome position: 14.85

GC content: 62.69

Gene sequence:

>579_bases
ATGGAAATGGGGCTCCTCTCCCGCCTCCGCTCCGCGTTTTCCCGGGATGAGGGACCGTCAGACGAGCGCGAGGGTAAGGG
CCTGATCGTCTTCGAAAGCGCCAGGGACGCGATGAAGGCGGAGAGGACCCTCAAGGAGGCCGGATACGACGTCCGGGCGG
TGGCCCCACCGCCGGAGATCCGCGAGGGGTGCGACCTGGCGATCGAGTACGACCTCGTCGACGAGGTAGGCGTGCGCCGA
ACGCTCGAGGAGATCGGTGTGGAACCGCTGAAGTTCGTATCACTCGAGGACCCTTCCCTCAAGCCCATCGAGCTGGTTCG
CGTCAAGGAGGTCGACGGATACATCATGGTCCGATGCGGCAACATGAAGGTGACCGTGGATCGGGACGGGACGATAGTGA
ACGTGTCGGGTGGAGGGTGTCCCGACGTCCCTTACCTGGCGCATGAACTCGTGGGCAAGAACGTTCTCGAGCTGTCGGAG
AACTCGATGCCGGCGAGCTTGGGATACACGCTCTGCGCGTACACCCTGGACAAAGCCGTGAGGAAGGCCAAGGAAGTACT
CTTAGGGGAGGGAAGTTGA

Upstream 100 bases:

>100_bases
GGCAACGTGACTGCGATGGCGTACCTGCTAGGGGTGTTCGTCGGTGCGGTGTTCTTCCACGCCTGCATCGTGCCGATCTT
CGGGCCGCCGAAGTGAGGGG

Downstream 100 bases:

>100_bases
TCATCGCGGGTACGGTTCCGATCGAAGGTCTCGGCCCCGTGGAGGGGAAGGTCGAGCCGCTGGACGATCGAATACGCGTC
GCCGGTCGTGAGATACCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MEMGLLSRLRSAFSRDEGPSDEREGKGLIVFESARDAMKAERTLKEAGYDVRAVAPPPEIREGCDLAIEYDLVDEVGVRR
TLEEIGVEPLKFVSLEDPSLKPIELVRVKEVDGYIMVRCGNMKVTVDRDGTIVNVSGGGCPDVPYLAHELVGKNVLELSE
NSMPASLGYTLCAYTLDKAVRKAKEVLLGEGS

Sequences:

>Translated_192_residues
MEMGLLSRLRSAFSRDEGPSDEREGKGLIVFESARDAMKAERTLKEAGYDVRAVAPPPEIREGCDLAIEYDLVDEVGVRR
TLEEIGVEPLKFVSLEDPSLKPIELVRVKEVDGYIMVRCGNMKVTVDRDGTIVNVSGGGCPDVPYLAHELVGKNVLELSE
NSMPASLGYTLCAYTLDKAVRKAKEVLLGEGS
>Mature_192_residues
MEMGLLSRLRSAFSRDEGPSDEREGKGLIVFESARDAMKAERTLKEAGYDVRAVAPPPEIREGCDLAIEYDLVDEVGVRR
TLEEIGVEPLKFVSLEDPSLKPIELVRVKEVDGYIMVRCGNMKVTVDRDGTIVNVSGGGCPDVPYLAHELVGKNVLELSE
NSMPASLGYTLCAYTLDKAVRKAKEVLLGEGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021778 [H]

Pfam domain/function: PF11823 DUF3343 [H]

EC number: NA

Molecular weight: Translated: 20989; Mature: 20989

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMGLLSRLRSAFSRDEGPSDEREGKGLIVFESARDAMKAERTLKEAGYDVRAVAPPPEI
CCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHH
REGCDLAIEYDLVDEVGVRRTLEEIGVEPLKFVSLEDPSLKPIELVRVKEVDGYIMVRCG
HCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEECCCEEEEEEC
NMKVTVDRDGTIVNVSGGGCPDVPYLAHELVGKNVLELSENSMPASLGYTLCAYTLDKAV
CEEEEEECCCCEEEECCCCCCCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHH
RKAKEVLLGEGS
HHHHHHHCCCCC
>Mature Secondary Structure
MEMGLLSRLRSAFSRDEGPSDEREGKGLIVFESARDAMKAERTLKEAGYDVRAVAPPPEI
CCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCHHH
REGCDLAIEYDLVDEVGVRRTLEEIGVEPLKFVSLEDPSLKPIELVRVKEVDGYIMVRCG
HCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEECCCEEEEEEC
NMKVTVDRDGTIVNVSGGGCPDVPYLAHELVGKNVLELSENSMPASLGYTLCAYTLDKAV
CEEEEEECCCCEEEECCCCCCCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHH
RKAKEVLLGEGS
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]