| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093702
Identifier: 20093702
GI number: 20093702
Start: 251171
End: 251644
Strand: Direct
Name: 20093702
Synonym: MK0262
Alternate gene names: NA
Gene position: 251171-251644 (Clockwise)
Preceding gene: 20093701
Following gene: 20093703
Centisome position: 14.82
GC content: 64.56
Gene sequence:
>474_bases GTGGCGGAGTACCTGCACGCCATCGGGACGCTCGCGTTCGGCGTGCTGATCGGCTACCTGGGCCAGCGGTCCGCGATGTG CTTCATAGGAGGAATCCGAGACGTGTACCTACTACGCGACACGTGGCTCGTGCAGGGCCTGATCGGGTTCCTCATCGGTG CCTTCTTCGGGCTGGTGGTGTTCGGAGCCGCGGGTATGATCAAGAAGTTCCCGTGGTTCCTGTACAAGGGAGCGTCCGCC ATCCCGGGTGACGTCCTCGGCAAGAAGCCGGGGTTCGCCGCCCACGCGGCGGTGACGGTGATAGGCGGTCTCGGCGTGGG TTTCCTGTCGGTGGTTCAGGGTGGCTGTCCGTTCAGGAACTACGTGATGGCGGCCGAGGGCAACGTGACTGCGATGGCGT ACCTGCTAGGGGTGTTCGTCGGTGCGGTGTTCTTCCACGCCTGCATCGTGCCGATCTTCGGGCCGCCGAAGTGA
Upstream 100 bases:
>100_bases GGGACGTCGTAGCGCTCCTCGGACTGATCTCCATAGCCGTCGGCGTGATACTGGGCGCCGAGTTCTACCTCAAGAGAAAG GCGTGAGGGGGGAACGGAGC
Downstream 100 bases:
>100_bases GGGGATGGAAATGGGGCTCCTCTCCCGCCTCCGCTCCGCGTTTTCCCGGGATGAGGGACCGTCAGACGAGCGCGAGGGTA AGGGCCTGATCGTCTTCGAA
Product: transporter component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MAEYLHAIGTLAFGVLIGYLGQRSAMCFIGGIRDVYLLRDTWLVQGLIGFLIGAFFGLVVFGAAGMIKKFPWFLYKGASA IPGDVLGKKPGFAAHAAVTVIGGLGVGFLSVVQGGCPFRNYVMAAEGNVTAMAYLLGVFVGAVFFHACIVPIFGPPK
Sequences:
>Translated_157_residues MAEYLHAIGTLAFGVLIGYLGQRSAMCFIGGIRDVYLLRDTWLVQGLIGFLIGAFFGLVVFGAAGMIKKFPWFLYKGASA IPGDVLGKKPGFAAHAAVTVIGGLGVGFLSVVQGGCPFRNYVMAAEGNVTAMAYLLGVFVGAVFFHACIVPIFGPPK >Mature_156_residues AEYLHAIGTLAFGVLIGYLGQRSAMCFIGGIRDVYLLRDTWLVQGLIGFLIGAFFGLVVFGAAGMIKKFPWFLYKGASAI PGDVLGKKPGFAAHAAVTVIGGLGVGFLSVVQGGCPFRNYVMAAEGNVTAMAYLLGVFVGAVFFHACIVPIFGPPK
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16484; Mature: 16353
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEYLHAIGTLAFGVLIGYLGQRSAMCFIGGIRDVYLLRDTWLVQGLIGFLIGAFFGLVV CHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGAAGMIKKFPWFLYKGASAIPGDVLGKKPGFAAHAAVTVIGGLGVGFLSVVQGGCPFRN HHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH YVMAAEGNVTAMAYLLGVFVGAVFFHACIVPIFGPPK EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEYLHAIGTLAFGVLIGYLGQRSAMCFIGGIRDVYLLRDTWLVQGLIGFLIGAFFGLVV HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGAAGMIKKFPWFLYKGASAIPGDVLGKKPGFAAHAAVTVIGGLGVGFLSVVQGGCPFRN HHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH YVMAAEGNVTAMAYLLGVFVGAVFFHACIVPIFGPPK EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA