Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20093702

Identifier: 20093702

GI number: 20093702

Start: 251171

End: 251644

Strand: Direct

Name: 20093702

Synonym: MK0262

Alternate gene names: NA

Gene position: 251171-251644 (Clockwise)

Preceding gene: 20093701

Following gene: 20093703

Centisome position: 14.82

GC content: 64.56

Gene sequence:

>474_bases
GTGGCGGAGTACCTGCACGCCATCGGGACGCTCGCGTTCGGCGTGCTGATCGGCTACCTGGGCCAGCGGTCCGCGATGTG
CTTCATAGGAGGAATCCGAGACGTGTACCTACTACGCGACACGTGGCTCGTGCAGGGCCTGATCGGGTTCCTCATCGGTG
CCTTCTTCGGGCTGGTGGTGTTCGGAGCCGCGGGTATGATCAAGAAGTTCCCGTGGTTCCTGTACAAGGGAGCGTCCGCC
ATCCCGGGTGACGTCCTCGGCAAGAAGCCGGGGTTCGCCGCCCACGCGGCGGTGACGGTGATAGGCGGTCTCGGCGTGGG
TTTCCTGTCGGTGGTTCAGGGTGGCTGTCCGTTCAGGAACTACGTGATGGCGGCCGAGGGCAACGTGACTGCGATGGCGT
ACCTGCTAGGGGTGTTCGTCGGTGCGGTGTTCTTCCACGCCTGCATCGTGCCGATCTTCGGGCCGCCGAAGTGA

Upstream 100 bases:

>100_bases
GGGACGTCGTAGCGCTCCTCGGACTGATCTCCATAGCCGTCGGCGTGATACTGGGCGCCGAGTTCTACCTCAAGAGAAAG
GCGTGAGGGGGGAACGGAGC

Downstream 100 bases:

>100_bases
GGGGATGGAAATGGGGCTCCTCTCCCGCCTCCGCTCCGCGTTTTCCCGGGATGAGGGACCGTCAGACGAGCGCGAGGGTA
AGGGCCTGATCGTCTTCGAA

Product: transporter component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MAEYLHAIGTLAFGVLIGYLGQRSAMCFIGGIRDVYLLRDTWLVQGLIGFLIGAFFGLVVFGAAGMIKKFPWFLYKGASA
IPGDVLGKKPGFAAHAAVTVIGGLGVGFLSVVQGGCPFRNYVMAAEGNVTAMAYLLGVFVGAVFFHACIVPIFGPPK

Sequences:

>Translated_157_residues
MAEYLHAIGTLAFGVLIGYLGQRSAMCFIGGIRDVYLLRDTWLVQGLIGFLIGAFFGLVVFGAAGMIKKFPWFLYKGASA
IPGDVLGKKPGFAAHAAVTVIGGLGVGFLSVVQGGCPFRNYVMAAEGNVTAMAYLLGVFVGAVFFHACIVPIFGPPK
>Mature_156_residues
AEYLHAIGTLAFGVLIGYLGQRSAMCFIGGIRDVYLLRDTWLVQGLIGFLIGAFFGLVVFGAAGMIKKFPWFLYKGASAI
PGDVLGKKPGFAAHAAVTVIGGLGVGFLSVVQGGCPFRNYVMAAEGNVTAMAYLLGVFVGAVFFHACIVPIFGPPK

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16484; Mature: 16353

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYLHAIGTLAFGVLIGYLGQRSAMCFIGGIRDVYLLRDTWLVQGLIGFLIGAFFGLVV
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGAAGMIKKFPWFLYKGASAIPGDVLGKKPGFAAHAAVTVIGGLGVGFLSVVQGGCPFRN
HHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YVMAAEGNVTAMAYLLGVFVGAVFFHACIVPIFGPPK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AEYLHAIGTLAFGVLIGYLGQRSAMCFIGGIRDVYLLRDTWLVQGLIGFLIGAFFGLVV
HHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGAAGMIKKFPWFLYKGASAIPGDVLGKKPGFAAHAAVTVIGGLGVGFLSVVQGGCPFRN
HHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
YVMAAEGNVTAMAYLLGVFVGAVFFHACIVPIFGPPK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA