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The map label for this gene is 20093662

Identifier: 20093662

GI number: 20093662

Start: 209784

End: 210659

Strand: Direct

Name: 20093662

Synonym: MK0222

Alternate gene names: NA

Gene position: 209784-210659 (Clockwise)

Preceding gene: 20093661

Following gene: 20093663

Centisome position: 12.38

GC content: 58.11

Gene sequence:

>876_bases
ATGGCACGAGACGGACGACGGAAGTCACCCGTCGACGTCAGGATAATCGTGGAGGGAGCCGCCGACGCCGAGACCATCTC
TAAAGTGATCCAACGGATGGCGCTCGGAGGAGAGTACAACATCACAGTGACGTCCATCATCCCTACTACCCACGCCCACA
TCGCACGACGGACCGCCGAAGGTGCGGACTTAGTGCTCATTGCCACCGACGCGGACAAGCCTGGTCGCAAACTGGCCAAG
AAGTTCCAGGAAGAGCTACGCGGCGTCGTAGGTCGAGTGGAACGCGTGAAGATGCCCATCGGACACGACGTGGAACACGT
GGACCTGGAAATAGTGGAGAAGGAGCTCCGCAGCGCCCTCGTCCGCGCCGGCCTCAAAAGTCTCAGGGACATTAAGGAGC
TGCGCGAGGAGATCAAGGAGCTTCAAGAGGAAATCGAAGAGAAGGAAGAGCTCATCGAGGAACTCGAGGAGAAAGAATCG
GAGTTGGAAGAACTGCGCGAGAGACTAAAGGAGATCGAGAAGGAAAAAGCGCTCCTGGAGGAGGAACGGGACAGACTACT
GGATGAAGTCGAGCGGCTCAGAGACCGCCTCGAAGAGCTTGAGGAGGAGCTGGAATCCGCGGATCATCTGCGGATCATGG
ACCTCGAGTCCGTGTGTGAAGAGGCGGAGCTGAGCCCGGAGGACGTAGAGCCGGAGGTCCTAGAGGAGCTCGGAGAAGAG
CTCGAAATCCCGATAGTGGTAGGGTCCACCCGAATTGCAGCACCGTCCAGGGAGGACGCTGTCAGGGTACTAAAGATCTA
CAAGCTCGCCCGAAAAGTGGTCGATGGCGAGGGGGAGGAGGAAAACGAAACGACTCCAGGAGATCCTGAAGTCTGA

Upstream 100 bases:

>100_bases
TGTGCAGCCTGTGGGTTCGGTCGCTCACGGCGCATCCGTCGGTACAGCTGGCAGAACAAGAAGGTGAACCGCAAGCGACG
CCGCTAAGGGAGCCCCGGTA

Downstream 100 bases:

>100_bases
TGATTTCTTTCTAGAGAAGGTGGAGAAGCTCGAGGAGCTCGCAGAAGGTGAACCCTGTGCCCTCGTCAGGCGCCAAAACG
TTGAGTGGATAACCCATTTT

Product: TOPRIM domain-containing protein

Products: NA

Alternate protein names: Prim Domain Protein; TOPRIM-Domain-Containing Protein Potential Nuclease; Prim-Domain-Containing Protein Potential Nuclease

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MARDGRRKSPVDVRIIVEGAADAETISKVIQRMALGGEYNITVTSIIPTTHAHIARRTAEGADLVLIATDADKPGRKLAK
KFQEELRGVVGRVERVKMPIGHDVEHVDLEIVEKELRSALVRAGLKSLRDIKELREEIKELQEEIEEKEELIEELEEKES
ELEELRERLKEIEKEKALLEEERDRLLDEVERLRDRLEELEEELESADHLRIMDLESVCEEAELSPEDVEPEVLEELGEE
LEIPIVVGSTRIAAPSREDAVRVLKIYKLARKVVDGEGEEENETTPGDPEV

Sequences:

>Translated_291_residues
MARDGRRKSPVDVRIIVEGAADAETISKVIQRMALGGEYNITVTSIIPTTHAHIARRTAEGADLVLIATDADKPGRKLAK
KFQEELRGVVGRVERVKMPIGHDVEHVDLEIVEKELRSALVRAGLKSLRDIKELREEIKELQEEIEEKEELIEELEEKES
ELEELRERLKEIEKEKALLEEERDRLLDEVERLRDRLEELEEELESADHLRIMDLESVCEEAELSPEDVEPEVLEELGEE
LEIPIVVGSTRIAAPSREDAVRVLKIYKLARKVVDGEGEEENETTPGDPEV
>Mature_290_residues
ARDGRRKSPVDVRIIVEGAADAETISKVIQRMALGGEYNITVTSIIPTTHAHIARRTAEGADLVLIATDADKPGRKLAKK
FQEELRGVVGRVERVKMPIGHDVEHVDLEIVEKELRSALVRAGLKSLRDIKELREEIKELQEEIEEKEELIEELEEKESE
LEELRERLKEIEKEKALLEEERDRLLDEVERLRDRLEELEEELESADHLRIMDLESVCEEAELSPEDVEPEVLEELGEEL
EIPIVVGSTRIAAPSREDAVRVLKIYKLARKVVDGEGEEENETTPGDPEV

Specific function: Unknown

COG id: COG4026

COG function: function code R; Uncharacterized protein containing TOPRIM domain, potential nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33154; Mature: 33023

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARDGRRKSPVDVRIIVEGAADAETISKVIQRMALGGEYNITVTSIIPTTHAHIARRTAE
CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCC
GADLVLIATDADKPGRKLAKKFQEELRGVVGRVERVKMPIGHDVEHVDLEIVEKELRSAL
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VRAGLKSLRDIKELREEIKELQEEIEEKEELIEELEEKESELEELRERLKEIEKEKALLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERDRLLDEVERLRDRLEELEEELESADHLRIMDLESVCEEAELSPEDVEPEVLEELGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHH
LEIPIVVGSTRIAAPSREDAVRVLKIYKLARKVVDGEGEEENETTPGDPEV
CCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARDGRRKSPVDVRIIVEGAADAETISKVIQRMALGGEYNITVTSIIPTTHAHIARRTAE
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCC
GADLVLIATDADKPGRKLAKKFQEELRGVVGRVERVKMPIGHDVEHVDLEIVEKELRSAL
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VRAGLKSLRDIKELREEIKELQEEIEEKEELIEELEEKESELEELRERLKEIEKEKALLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERDRLLDEVERLRDRLEELEEELESADHLRIMDLESVCEEAELSPEDVEPEVLEELGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCCCHHHHHHHHHH
LEIPIVVGSTRIAAPSREDAVRVLKIYKLARKVVDGEGEEENETTPGDPEV
CCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA