| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is PgpB
Identifier: 20093637
GI number: 20093637
Start: 191179
End: 191640
Strand: Reverse
Name: PgpB
Synonym: MK0197
Alternate gene names: NA
Gene position: 191640-191179 (Counterclockwise)
Preceding gene: 20093638
Following gene: 20093636
Centisome position: 11.31
GC content: 56.93
Gene sequence:
>462_bases GTGGCTGAAATCGTAGTGCGGTTCGATCATCGCGTGATCGAGAAGATCCCGAGACGGCCCCACCCGGTCTTCGAGCTCAT CGGTTTCATCTTCAGTGGTTGGGTTTTATTCCCCTCTTCTCTGATCCTAATGCTGTTCGACCGTCCGCTGGGTTTCCAGG TGCTCGAAGCGCTGGTCCTTTCCATGGTATCCAGCGAGATTTTGAAGGTGGTCGTCGGTAGACCCCGACCCCAGAGAGAA GGTAGAACTCCGTGGGGGTATTCTTTCCCCAGCACCCATACCGCCAGAGTGGCTTCGCTAATCCCGGTGTTCTGGAAGCT GTCCTCCAATTTGGGGATCGTGGTCGTCGTAGTGGCCATCATCGTGGCGATATCCAGAGTGCTTTCCCGGGCTCACTACC CGTCAGACGTGGTGGCGGGGTTCCTCCTCGGCTACGTAGTGGGGTGGTTCGTCATTTGGTGA
Upstream 100 bases:
>100_bases GGTACGTGGATTACCGGACCGCTGTGCTGGAGTCCCTAACGTGCATCAAGAGAGCTGGGGCGGATTTGATACTCACGTAC TTCGCTCCGGAGGTGGTGCG
Downstream 100 bases:
>100_bases ACGAGCCGGAGCGTATCGCCGTCAGCTTAACCCTCGGAGCGCTTCTGGAGGTCTCAAGTTGGCCTAAGCCCGGAAACGTC CACAGAACCAGGGATTTCGA
Product: membrane-associated phospholipid phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MAEIVVRFDHRVIEKIPRRPHPVFELIGFIFSGWVLFPSSLILMLFDRPLGFQVLEALVLSMVSSEILKVVVGRPRPQRE GRTPWGYSFPSTHTARVASLIPVFWKLSSNLGIVVVVVAIIVAISRVLSRAHYPSDVVAGFLLGYVVGWFVIW
Sequences:
>Translated_153_residues MAEIVVRFDHRVIEKIPRRPHPVFELIGFIFSGWVLFPSSLILMLFDRPLGFQVLEALVLSMVSSEILKVVVGRPRPQRE GRTPWGYSFPSTHTARVASLIPVFWKLSSNLGIVVVVVAIIVAISRVLSRAHYPSDVVAGFLLGYVVGWFVIW >Mature_152_residues AEIVVRFDHRVIEKIPRRPHPVFELIGFIFSGWVLFPSSLILMLFDRPLGFQVLEALVLSMVSSEILKVVVGRPRPQREG RTPWGYSFPSTHTARVASLIPVFWKLSSNLGIVVVVVAIIVAISRVLSRAHYPSDVVAGFLLGYVVGWFVIW
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 - InterPro: IPR015414 [H]
Pfam domain/function: PF01569 PAP2; PF09335 SNARE_assoc [H]
EC number: NA
Molecular weight: Translated: 17239; Mature: 17108
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIVVRFDHRVIEKIPRRPHPVFELIGFIFSGWVLFPSSLILMLFDRPLGFQVLEALVL CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SMVSSEILKVVVGRPRPQREGRTPWGYSFPSTHTARVASLIPVFWKLSSNLGIVVVVVAI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH IVAISRVLSRAHYPSDVVAGFLLGYVVGWFVIW HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AEIVVRFDHRVIEKIPRRPHPVFELIGFIFSGWVLFPSSLILMLFDRPLGFQVLEALVL CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH SMVSSEILKVVVGRPRPQREGRTPWGYSFPSTHTARVASLIPVFWKLSSNLGIVVVVVAI HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH IVAISRVLSRAHYPSDVVAGFLLGYVVGWFVIW HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]