| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is SgbH [H]
Identifier: 20093593
GI number: 20093593
Start: 152432
End: 153412
Strand: Reverse
Name: SgbH [H]
Synonym: MK0153
Alternate gene names: 20093593
Gene position: 153412-152432 (Counterclockwise)
Preceding gene: 20093594
Following gene: 20093592
Centisome position: 9.05
GC content: 60.45
Gene sequence:
>981_bases ATGCTTACACAGGTAGCGTTGGATCTTACATCCCTGCCCAAAGCCATCGAAATAGCCGAAGCGAGCGTGGAGGCCGGAAT CCACGTACTTGAGGTCGGAACACCGCTCATCAAGGCCGAAGGATCGCGGGCGATCGAGCGGTTGGCCGAGGAGTTTCCGG AGCGTCCCATAGTCGCCGACACGAAAACGATGGACGTGGGGGCACTGGAGGCGGAGCTATCGATTAAACACGGGGCGAAC CTGGGATGCGTGCTGGGTGCGGCGCCCGAGGAGACGATTCGATCGTTCGTCACCAGGGCACATGAGCTCTGCGCCGGGGC ATTAGTGGACACTATCGGCGTCAATCCCGTAGACGTCCTGTCGAAGTTGAAGGGACTTGAGGAATTCCCGGACTACCTCC TGCTCCACGCGGCCATCGACGAGCCGATCACGGGGGAAGAGCTACTCCACAAGTTCGGGGTCGACCGGTGTCCCGCGAGA ACTGCGGTCGCAGGTGGTCTTACCCCGAGGAAGATAGAGGAGCTGGATGGTGTGGACTTGGTGATCGTGGGCGGGTACAT CACGTCCTCTGAGGACCCCGTGAAGGCCGCGGAGGCTGTCGTGGAAGCCGCCGGTGTGGAACCTTACGATTTCAGACCCG ACGAAGACCAGCGTGAGGCGTTGCTCGGTATTCGTAAACACAGTACCGTGGGGATCGTCGTGAAGGATTCTGAACGTGTC TCCGAAGTCTTGAACGCGGCCATCCGGCTCGTGGAATGGGTCCGAAACGAGCCCAGCTTGCGTACGGTCGGTGACGACGA CTCGGATCTCGTGCCGAAGTTCGAGGGTGACGGGCGCGATCTCACCCTGATCCTGGGAGCGGAGGAGTTCGATCGGGAGG ACCTGGAGAGTATCGCCAAGGAGAGCGTGAAGACGATCCTCGTGGCCGAGGAGCACGTACTCAAGCTGTACGGGGTAGCG GAAGCAGTCTACGAGATATGA
Upstream 100 bases:
>100_bases ACGCGGTGCGTCCACACTATTCAAAGAGAGCCGTTGTGAAAACCGACGCGAGTCCGGAGGAGTTCGAAGCCGTCCTCACA GAGGTGGCGGGGGACAGCGG
Downstream 100 bases:
>100_bases GGTAGGGGGCACGGAATTGACCGAGGATGTCTACGAACGTATCATGGAGATCGCACGCCGACGCGGGTTCATACTGCCTG CGTTCCGCATCTACGGGGGA
Product: 3-hexulose-6-phosphate synthase
Products: NA
Alternate protein names: HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MLTQVALDLTSLPKAIEIAEASVEAGIHVLEVGTPLIKAEGSRAIERLAEEFPERPIVADTKTMDVGALEAELSIKHGAN LGCVLGAAPEETIRSFVTRAHELCAGALVDTIGVNPVDVLSKLKGLEEFPDYLLLHAAIDEPITGEELLHKFGVDRCPAR TAVAGGLTPRKIEELDGVDLVIVGGYITSSEDPVKAAEAVVEAAGVEPYDFRPDEDQREALLGIRKHSTVGIVVKDSERV SEVLNAAIRLVEWVRNEPSLRTVGDDDSDLVPKFEGDGRDLTLILGAEEFDREDLESIAKESVKTILVAEEHVLKLYGVA EAVYEI
Sequences:
>Translated_326_residues MLTQVALDLTSLPKAIEIAEASVEAGIHVLEVGTPLIKAEGSRAIERLAEEFPERPIVADTKTMDVGALEAELSIKHGAN LGCVLGAAPEETIRSFVTRAHELCAGALVDTIGVNPVDVLSKLKGLEEFPDYLLLHAAIDEPITGEELLHKFGVDRCPAR TAVAGGLTPRKIEELDGVDLVIVGGYITSSEDPVKAAEAVVEAAGVEPYDFRPDEDQREALLGIRKHSTVGIVVKDSERV SEVLNAAIRLVEWVRNEPSLRTVGDDDSDLVPKFEGDGRDLTLILGAEEFDREDLESIAKESVKTILVAEEHVLKLYGVA EAVYEI >Mature_326_residues MLTQVALDLTSLPKAIEIAEASVEAGIHVLEVGTPLIKAEGSRAIERLAEEFPERPIVADTKTMDVGALEAELSIKHGAN LGCVLGAAPEETIRSFVTRAHELCAGALVDTIGVNPVDVLSKLKGLEEFPDYLLLHAAIDEPITGEELLHKFGVDRCPAR TAVAGGLTPRKIEELDGVDLVIVGGYITSSEDPVKAAEAVVEAAGVEPYDFRPDEDQREALLGIRKHSTVGIVVKDSERV SEVLNAAIRLVEWVRNEPSLRTVGDDDSDLVPKFEGDGRDLTLILGAEEFDREDLESIAKESVKTILVAEEHVLKLYGVA EAVYEI
Specific function: Catalyzes the condensation of ribulose 5-phosphate with formaldehyde to form 3-hexulose 6-phosphate [H]
COG id: COG0269
COG function: function code G; 3-hexulose-6-phosphate synthase and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPS/KGPDC family. HPS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR017120 - InterPro: IPR001754 - InterPro: IPR011060 - InterPro: IPR005493 [H]
Pfam domain/function: PF03737 Methyltransf_6; PF00215 OMPdecase [H]
EC number: =4.1.2.43 [H]
Molecular weight: Translated: 35141; Mature: 35141
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTQVALDLTSLPKAIEIAEASVEAGIHVLEVGTPLIKAEGSRAIERLAEEFPERPIVAD CCCHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCEECCCHHHHHHHHHHCCCCCCCCC TKTMDVGALEAELSIKHGANLGCVLGAAPEETIRSFVTRAHELCAGALVDTIGVNPVDVL CCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SKLKGLEEFPDYLLLHAAIDEPITGEELLHKFGVDRCPARTAVAGGLTPRKIEELDGVDL HHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHCCCCCE VIVGGYITSSEDPVKAAEAVVEAAGVEPYDFRPDEDQREALLGIRKHSTVGIVVKDSERV EEECCEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECHHHH SEVLNAAIRLVEWVRNEPSLRTVGDDDSDLVPKFEGDGRDLTLILGAEEFDREDLESIAK HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH ESVKTILVAEEHVLKLYGVAEAVYEI HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTQVALDLTSLPKAIEIAEASVEAGIHVLEVGTPLIKAEGSRAIERLAEEFPERPIVAD CCCHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCEECCCHHHHHHHHHHCCCCCCCCC TKTMDVGALEAELSIKHGANLGCVLGAAPEETIRSFVTRAHELCAGALVDTIGVNPVDVL CCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH SKLKGLEEFPDYLLLHAAIDEPITGEELLHKFGVDRCPARTAVAGGLTPRKIEELDGVDL HHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHCCCCCE VIVGGYITSSEDPVKAAEAVVEAAGVEPYDFRPDEDQREALLGIRKHSTVGIVVKDSERV EEECCEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECHHHH SEVLNAAIRLVEWVRNEPSLRTVGDDDSDLVPKFEGDGRDLTLILGAEEFDREDLESIAK HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH ESVKTILVAEEHVLKLYGVAEAVYEI HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA