Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is SgbH [H]

Identifier: 20093593

GI number: 20093593

Start: 152432

End: 153412

Strand: Reverse

Name: SgbH [H]

Synonym: MK0153

Alternate gene names: 20093593

Gene position: 153412-152432 (Counterclockwise)

Preceding gene: 20093594

Following gene: 20093592

Centisome position: 9.05

GC content: 60.45

Gene sequence:

>981_bases
ATGCTTACACAGGTAGCGTTGGATCTTACATCCCTGCCCAAAGCCATCGAAATAGCCGAAGCGAGCGTGGAGGCCGGAAT
CCACGTACTTGAGGTCGGAACACCGCTCATCAAGGCCGAAGGATCGCGGGCGATCGAGCGGTTGGCCGAGGAGTTTCCGG
AGCGTCCCATAGTCGCCGACACGAAAACGATGGACGTGGGGGCACTGGAGGCGGAGCTATCGATTAAACACGGGGCGAAC
CTGGGATGCGTGCTGGGTGCGGCGCCCGAGGAGACGATTCGATCGTTCGTCACCAGGGCACATGAGCTCTGCGCCGGGGC
ATTAGTGGACACTATCGGCGTCAATCCCGTAGACGTCCTGTCGAAGTTGAAGGGACTTGAGGAATTCCCGGACTACCTCC
TGCTCCACGCGGCCATCGACGAGCCGATCACGGGGGAAGAGCTACTCCACAAGTTCGGGGTCGACCGGTGTCCCGCGAGA
ACTGCGGTCGCAGGTGGTCTTACCCCGAGGAAGATAGAGGAGCTGGATGGTGTGGACTTGGTGATCGTGGGCGGGTACAT
CACGTCCTCTGAGGACCCCGTGAAGGCCGCGGAGGCTGTCGTGGAAGCCGCCGGTGTGGAACCTTACGATTTCAGACCCG
ACGAAGACCAGCGTGAGGCGTTGCTCGGTATTCGTAAACACAGTACCGTGGGGATCGTCGTGAAGGATTCTGAACGTGTC
TCCGAAGTCTTGAACGCGGCCATCCGGCTCGTGGAATGGGTCCGAAACGAGCCCAGCTTGCGTACGGTCGGTGACGACGA
CTCGGATCTCGTGCCGAAGTTCGAGGGTGACGGGCGCGATCTCACCCTGATCCTGGGAGCGGAGGAGTTCGATCGGGAGG
ACCTGGAGAGTATCGCCAAGGAGAGCGTGAAGACGATCCTCGTGGCCGAGGAGCACGTACTCAAGCTGTACGGGGTAGCG
GAAGCAGTCTACGAGATATGA

Upstream 100 bases:

>100_bases
ACGCGGTGCGTCCACACTATTCAAAGAGAGCCGTTGTGAAAACCGACGCGAGTCCGGAGGAGTTCGAAGCCGTCCTCACA
GAGGTGGCGGGGGACAGCGG

Downstream 100 bases:

>100_bases
GGTAGGGGGCACGGAATTGACCGAGGATGTCTACGAACGTATCATGGAGATCGCACGCCGACGCGGGTTCATACTGCCTG
CGTTCCGCATCTACGGGGGA

Product: 3-hexulose-6-phosphate synthase

Products: NA

Alternate protein names: HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MLTQVALDLTSLPKAIEIAEASVEAGIHVLEVGTPLIKAEGSRAIERLAEEFPERPIVADTKTMDVGALEAELSIKHGAN
LGCVLGAAPEETIRSFVTRAHELCAGALVDTIGVNPVDVLSKLKGLEEFPDYLLLHAAIDEPITGEELLHKFGVDRCPAR
TAVAGGLTPRKIEELDGVDLVIVGGYITSSEDPVKAAEAVVEAAGVEPYDFRPDEDQREALLGIRKHSTVGIVVKDSERV
SEVLNAAIRLVEWVRNEPSLRTVGDDDSDLVPKFEGDGRDLTLILGAEEFDREDLESIAKESVKTILVAEEHVLKLYGVA
EAVYEI

Sequences:

>Translated_326_residues
MLTQVALDLTSLPKAIEIAEASVEAGIHVLEVGTPLIKAEGSRAIERLAEEFPERPIVADTKTMDVGALEAELSIKHGAN
LGCVLGAAPEETIRSFVTRAHELCAGALVDTIGVNPVDVLSKLKGLEEFPDYLLLHAAIDEPITGEELLHKFGVDRCPAR
TAVAGGLTPRKIEELDGVDLVIVGGYITSSEDPVKAAEAVVEAAGVEPYDFRPDEDQREALLGIRKHSTVGIVVKDSERV
SEVLNAAIRLVEWVRNEPSLRTVGDDDSDLVPKFEGDGRDLTLILGAEEFDREDLESIAKESVKTILVAEEHVLKLYGVA
EAVYEI
>Mature_326_residues
MLTQVALDLTSLPKAIEIAEASVEAGIHVLEVGTPLIKAEGSRAIERLAEEFPERPIVADTKTMDVGALEAELSIKHGAN
LGCVLGAAPEETIRSFVTRAHELCAGALVDTIGVNPVDVLSKLKGLEEFPDYLLLHAAIDEPITGEELLHKFGVDRCPAR
TAVAGGLTPRKIEELDGVDLVIVGGYITSSEDPVKAAEAVVEAAGVEPYDFRPDEDQREALLGIRKHSTVGIVVKDSERV
SEVLNAAIRLVEWVRNEPSLRTVGDDDSDLVPKFEGDGRDLTLILGAEEFDREDLESIAKESVKTILVAEEHVLKLYGVA
EAVYEI

Specific function: Catalyzes the condensation of ribulose 5-phosphate with formaldehyde to form 3-hexulose 6-phosphate [H]

COG id: COG0269

COG function: function code G; 3-hexulose-6-phosphate synthase and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HPS/KGPDC family. HPS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017120
- InterPro:   IPR001754
- InterPro:   IPR011060
- InterPro:   IPR005493 [H]

Pfam domain/function: PF03737 Methyltransf_6; PF00215 OMPdecase [H]

EC number: =4.1.2.43 [H]

Molecular weight: Translated: 35141; Mature: 35141

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQVALDLTSLPKAIEIAEASVEAGIHVLEVGTPLIKAEGSRAIERLAEEFPERPIVAD
CCCHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCEECCCHHHHHHHHHHCCCCCCCCC
TKTMDVGALEAELSIKHGANLGCVLGAAPEETIRSFVTRAHELCAGALVDTIGVNPVDVL
CCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
SKLKGLEEFPDYLLLHAAIDEPITGEELLHKFGVDRCPARTAVAGGLTPRKIEELDGVDL
HHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHCCCCCE
VIVGGYITSSEDPVKAAEAVVEAAGVEPYDFRPDEDQREALLGIRKHSTVGIVVKDSERV
EEECCEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECHHHH
SEVLNAAIRLVEWVRNEPSLRTVGDDDSDLVPKFEGDGRDLTLILGAEEFDREDLESIAK
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
ESVKTILVAEEHVLKLYGVAEAVYEI
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTQVALDLTSLPKAIEIAEASVEAGIHVLEVGTPLIKAEGSRAIERLAEEFPERPIVAD
CCCHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCEECCCHHHHHHHHHHCCCCCCCCC
TKTMDVGALEAELSIKHGANLGCVLGAAPEETIRSFVTRAHELCAGALVDTIGVNPVDVL
CCCCCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
SKLKGLEEFPDYLLLHAAIDEPITGEELLHKFGVDRCPARTAVAGGLTPRKIEELDGVDL
HHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHCCCCCE
VIVGGYITSSEDPVKAAEAVVEAAGVEPYDFRPDEDQREALLGIRKHSTVGIVVKDSERV
EEECCEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECHHHH
SEVLNAAIRLVEWVRNEPSLRTVGDDDSDLVPKFEGDGRDLTLILGAEEFDREDLESIAK
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH
ESVKTILVAEEHVLKLYGVAEAVYEI
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA