| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093579
Identifier: 20093579
GI number: 20093579
Start: 139012
End: 139761
Strand: Direct
Name: 20093579
Synonym: MK0139
Alternate gene names: NA
Gene position: 139012-139761 (Clockwise)
Preceding gene: 20093578
Following gene: 20093580
Centisome position: 8.2
GC content: 60.0
Gene sequence:
>750_bases TTGCTGATGGATCGATTCGAGATGTTCGGCTCGGAGCTCTACGTACTTCGGACTGCACACGCCGGGGTGGACGGCGACCG GGTGCGACGTAAAATTCTGGAGTTGGATCCCGAAGCCGTGCTGGTGGAGTTATGCGAAGGTAGGCTGCTCTCGTTCCTCG CCGAACTTCGCGGTGAGCGGGCAGGATCACGGACCGGTGGAATCACGGGGAGGTTAGTCGCCGTAGCCGAGCGCATCGTG GGTCGCGTCGTCGGAGGAGAGTTGGGCGAGGACGTCAAAGGGGCCATCGAAGCGGCACTGGAGCTGGAAGCCGAGATAGT CCCCGTTGACATGGACATCAGCTGGGTCTTCCGAAGGATGAAGATGAAAGCCTCGAGATGGGAACTGCTGAAGTTCCAAT TCTCCGTGGCGATCGACGTCCTACGATCGTTACTCCGACCAGGTCAAACCAGGGATGTCGTGCTATCCTCCGTTGCGGAC GAAGAGGCCGCTCGAGAGATGGTCCAGGGGCTCAGACGTGCTTTTCCCAGGATAGCCGAGGTATTAATCGACGAGCGCAA TCGCGTCATCGCGGAGAACACGATCGAGTTCCTCCACAGCCGTGAGGACGTGACCAAAGCCGTTCTCGTGATAGGTGCAG CCCACTACGGAGTGCTCGACATTCTTCGGGACGCGGAGCTGGAGAGCGCGTCGCGTCACGATGATGAGGATACGGCGAGC GGAGAGGGTGAAGAGGAGACCGCGGGCTGA
Upstream 100 bases:
>100_bases CGAACAACGCGGGAGGCTCGAGGACGTCGAGTTCTGCGCTCGTGTGGACGAGTTCGAGGTCGTACCGGTCTACGAGGACG GTATGGTGGTGCCTCAATAG
Downstream 100 bases:
>100_bases GCTGGCCGGCCGGAAGATTGAAAGATTCTTGAATAATTCAAATTTCTTTATAGGGCAACAACGGATGAGGAGGGCACCAC GATGCGCGTGCTGTTCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLMDRFEMFGSELYVLRTAHAGVDGDRVRRKILELDPEAVLVELCEGRLLSFLAELRGERAGSRTGGITGRLVAVAERIV GRVVGGELGEDVKGAIEAALELEAEIVPVDMDISWVFRRMKMKASRWELLKFQFSVAIDVLRSLLRPGQTRDVVLSSVAD EEAAREMVQGLRRAFPRIAEVLIDERNRVIAENTIEFLHSREDVTKAVLVIGAAHYGVLDILRDAELESASRHDDEDTAS GEGEEETAG
Sequences:
>Translated_249_residues MLMDRFEMFGSELYVLRTAHAGVDGDRVRRKILELDPEAVLVELCEGRLLSFLAELRGERAGSRTGGITGRLVAVAERIV GRVVGGELGEDVKGAIEAALELEAEIVPVDMDISWVFRRMKMKASRWELLKFQFSVAIDVLRSLLRPGQTRDVVLSSVAD EEAAREMVQGLRRAFPRIAEVLIDERNRVIAENTIEFLHSREDVTKAVLVIGAAHYGVLDILRDAELESASRHDDEDTAS GEGEEETAG >Mature_249_residues MLMDRFEMFGSELYVLRTAHAGVDGDRVRRKILELDPEAVLVELCEGRLLSFLAELRGERAGSRTGGITGRLVAVAERIV GRVVGGELGEDVKGAIEAALELEAEIVPVDMDISWVFRRMKMKASRWELLKFQFSVAIDVLRSLLRPGQTRDVVLSSVAD EEAAREMVQGLRRAFPRIAEVLIDERNRVIAENTIEFLHSREDVTKAVLVIGAAHYGVLDILRDAELESASRHDDEDTAS GEGEEETAG
Specific function: Unknown
COG id: COG1916
COG function: function code S; Uncharacterized homolog of PrgY (pheromone shutdown protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27615; Mature: 27615
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMDRFEMFGSELYVLRTAHAGVDGDRVRRKILELDPEAVLVELCEGRLLSFLAELRGER CCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC AGSRTGGITGRLVAVAERIVGRVVGGELGEDVKGAIEAALELEAEIVPVDMDISWVFRRM CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCCHHHHHHHH KMKASRWELLKFQFSVAIDVLRSLLRPGQTRDVVLSSVADEEAAREMVQGLRRAFPRIAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIDERNRVIAENTIEFLHSREDVTKAVLVIGAAHYGVLDILRDAELESASRHDDEDTAS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GEGEEETAG CCCCCCCCC >Mature Secondary Structure MLMDRFEMFGSELYVLRTAHAGVDGDRVRRKILELDPEAVLVELCEGRLLSFLAELRGER CCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC AGSRTGGITGRLVAVAERIVGRVVGGELGEDVKGAIEAALELEAEIVPVDMDISWVFRRM CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCCHHHHHHHH KMKASRWELLKFQFSVAIDVLRSLLRPGQTRDVVLSSVADEEAAREMVQGLRRAFPRIAE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIDERNRVIAENTIEFLHSREDVTKAVLVIGAAHYGVLDILRDAELESASRHDDEDTAS HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GEGEEETAG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA