Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093577

Identifier: 20093577

GI number: 20093577

Start: 137551

End: 138318

Strand: Reverse

Name: 20093577

Synonym: MK0137

Alternate gene names: NA

Gene position: 138318-137551 (Counterclockwise)

Preceding gene: 20093581

Following gene: 20093576

Centisome position: 8.16

GC content: 57.03

Gene sequence:

>768_bases
GTGGTGGCGGTCGCGTTCCCGTGGAGTCTCTTCTCTGAGGAGACCGACCCCAAGATCTACGCTTATCGGGTGGGGACCCT
GGCGCGCGCCCTGGCCATATACCGAGTGGAGGAGGTTTACCTATACGGTGACGGCGTCGGAACCCGTAGGAACGCGGAAC
GGCTACGGAAGCTCTTAGAGTATCAGGAGTGTCCCCAGTACCTTAGGAAGAGGGTGTTCAGACTGGACCGTGACCTCAGG
TACGCCGGAGTCATGCCGCCGTTGAGGGCTCCCCACCATAAGGTCCACTCGCCGAAGGAAGGTGAGGTACGGGAGGGTTA
CGTCGTTAGGAGAAGTCGGAACGGAGCGCTCGTAGACGTAGGTGCCGACCGCCTCGCGCGCACCAGATGGCGCTTTAAAC
CACACGAACGGGTGACTGTGCGGATCGTCTCCGAGGACCCGCTGGAGGTGGAACCGGCCGAGCCCGAGGAGTACTGGGGG
TATCGAGTGAGGATTGTAAATGAGCTTAATGAGGTGTTAAGGGAGTTTAAGGAGGGTATCATTGTGACTTCAAGATACGG
TGAAGACGTTCGAGAAGTCGAGTTTAAGAGTCCGGTGAAGTGCCTGGTATTCGGGTCTAGCGAGGTGAGTGTCCTGGACG
TAGATCCGGGGGTTCGAGACGAGTATCCGGTGATTAACTTCGTGCCAAATCAAGGGGTGCAGGTAGTGAGAACTGAGGAG
GCCGTTCACACCACCCTTGCCGTACTTAACTACTTGGGATTAATATAA

Upstream 100 bases:

>100_bases
CCCGCAGCGCGTCCACGACCACTCCTATCTCGTACCCTTCCTGCGGTTCGAGGCCCGACGCCACCCGCAACTCGATCTCC
CCCGAAGGGGGCGTTACGTC

Downstream 100 bases:

>100_bases
AGACCTCCGCCGGCTCTCCGTCATCACACCGGCCGTCGGCCGGGGATTACCTCGTCATCGGTCCACATGTAAGTCAGTCC
GGTAACCGCACGGCGATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MVAVAFPWSLFSEETDPKIYAYRVGTLARALAIYRVEEVYLYGDGVGTRRNAERLRKLLEYQECPQYLRKRVFRLDRDLR
YAGVMPPLRAPHHKVHSPKEGEVREGYVVRRSRNGALVDVGADRLARTRWRFKPHERVTVRIVSEDPLEVEPAEPEEYWG
YRVRIVNELNEVLREFKEGIIVTSRYGEDVREVEFKSPVKCLVFGSSEVSVLDVDPGVRDEYPVINFVPNQGVQVVRTEE
AVHTTLAVLNYLGLI

Sequences:

>Translated_255_residues
MVAVAFPWSLFSEETDPKIYAYRVGTLARALAIYRVEEVYLYGDGVGTRRNAERLRKLLEYQECPQYLRKRVFRLDRDLR
YAGVMPPLRAPHHKVHSPKEGEVREGYVVRRSRNGALVDVGADRLARTRWRFKPHERVTVRIVSEDPLEVEPAEPEEYWG
YRVRIVNELNEVLREFKEGIIVTSRYGEDVREVEFKSPVKCLVFGSSEVSVLDVDPGVRDEYPVINFVPNQGVQVVRTEE
AVHTTLAVLNYLGLI
>Mature_255_residues
MVAVAFPWSLFSEETDPKIYAYRVGTLARALAIYRVEEVYLYGDGVGTRRNAERLRKLLEYQECPQYLRKRVFRLDRDLR
YAGVMPPLRAPHHKVHSPKEGEVREGYVVRRSRNGALVDVGADRLARTRWRFKPHERVTVRIVSEDPLEVEPAEPEEYWG
YRVRIVNELNEVLREFKEGIIVTSRYGEDVREVEFKSPVKCLVFGSSEVSVLDVDPGVRDEYPVINFVPNQGVQVVRTEE
AVHTTLAVLNYLGLI

Specific function: Unknown

COG id: COG2106

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI38679912, Length=297, Percent_Identity=32.996632996633, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17551846, Length=264, Percent_Identity=29.1666666666667, Blast_Score=90, Evalue=9e-19,
Organism=Drosophila melanogaster, GI20129839, Length=290, Percent_Identity=30, Blast_Score=104, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003750 [H]

Pfam domain/function: PF02598 DUF171 [H]

EC number: NA

Molecular weight: Translated: 29504; Mature: 29504

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVAFPWSLFSEETDPKIYAYRVGTLARALAIYRVEEVYLYGDGVGTRRNAERLRKLLE
CEEEEECHHHHCCCCCCEEEEEEHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHH
YQECPQYLRKRVFRLDRDLRYAGVMPPLRAPHHKVHSPKEGEVREGYVVRRSRNGALVDV
HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEC
GADRLARTRWRFKPHERVTVRIVSEDPLEVEPAEPEEYWGYRVRIVNELNEVLREFKEGI
CHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHCCE
IVTSRYGEDVREVEFKSPVKCLVFGSSEVSVLDVDPGVRDEYPVINFVPNQGVQVVRTEE
EEEECCCCHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEHHH
AVHTTLAVLNYLGLI
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAVAFPWSLFSEETDPKIYAYRVGTLARALAIYRVEEVYLYGDGVGTRRNAERLRKLLE
CEEEEECHHHHCCCCCCEEEEEEHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHH
YQECPQYLRKRVFRLDRDLRYAGVMPPLRAPHHKVHSPKEGEVREGYVVRRSRNGALVDV
HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEC
GADRLARTRWRFKPHERVTVRIVSEDPLEVEPAEPEEYWGYRVRIVNELNEVLREFKEGI
CHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCEEHHHHHHHHHHHHHCCE
IVTSRYGEDVREVEFKSPVKCLVFGSSEVSVLDVDPGVRDEYPVINFVPNQGVQVVRTEE
EEEECCCCHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCCEEEEEHHH
AVHTTLAVLNYLGLI
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2406244 [H]