| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093535
Identifier: 20093535
GI number: 20093535
Start: 88185
End: 88820
Strand: Reverse
Name: 20093535
Synonym: MK0095
Alternate gene names: NA
Gene position: 88820-88185 (Counterclockwise)
Preceding gene: 20093536
Following gene: 20093534
Centisome position: 5.24
GC content: 61.32
Gene sequence:
>636_bases ATGTCCGTGGCGATAGTGGAACATCTCGACCGGTGGTCTCCCTGGCTCGACCTCGAGTACATGGAGGCCTACCGGACCGC GAGGAAGCACGGGTGGGAGTTCACGGTCACGAACGCGGACCCTGAGGTGCTGGCGAAGGCCAAGTATCCGGCACTGCCGT ACTCCGCGTCCAAGCTCCCCCTTCGAGGCGACCGTGTGATAGTCCTCGACCCGGACGCCGAGGATCCTCTGACTCCCGAG GACGATCCCGACGTGGTGATCGTCGGAGGTATCCTCGGCGACTACCCCCGTCGACATCGTACTCGGGAGGAGCTTACACC GCGGTTCCCCGACGCCGAGGTTCGACATTTAGGACCTTACCATTTCAGCATCGACGGCGCCCTTAGAGTGGCTCTCACGG TACTCGAGTGTGGAGTTCCGTTGGAGGAGATACAAGTGGTGGAGAGGCCCGAGATCGAGGTCGCACCGGGTCATACGGTG CGATTGGATTGCGACTACCCCTCCGAGGGAAAGCCGATGCTTCCGGAGGGTCTGGTCGAGTACCTGAAGGAGGGTATCGT CGACTATGAAGAAGCTGAGTTTAGCGCTCGTAGGCGCTGGAGGCATCGGAACGACGGTGTTGAGGGAGATCCGTGA
Upstream 100 bases:
>100_bases AATCTCCGGAGAAGGCGTCTTCCGGGGAGGAAGGGAAAAGGAAGAAGCAGGAGAGCTCACCGGCTAAACCTTCAGATCTG GAGATCTGAGGTGTCGCGTG
Downstream 100 bases:
>100_bases AGGACGGCTCGAAGGTAAGGTGGAACCGGTTCTGGTCTGTGATCGTCACCCGGAGAAGCTCAAACGCATCGAGCGGTGGT TCCCCGACTGCGATACCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSVAIVEHLDRWSPWLDLEYMEAYRTARKHGWEFTVTNADPEVLAKAKYPALPYSASKLPLRGDRVIVLDPDAEDPLTPE DDPDVVIVGGILGDYPRRHRTREELTPRFPDAEVRHLGPYHFSIDGALRVALTVLECGVPLEEIQVVERPEIEVAPGHTV RLDCDYPSEGKPMLPEGLVEYLKEGIVDYEEAEFSARRRWRHRNDGVEGDP
Sequences:
>Translated_211_residues MSVAIVEHLDRWSPWLDLEYMEAYRTARKHGWEFTVTNADPEVLAKAKYPALPYSASKLPLRGDRVIVLDPDAEDPLTPE DDPDVVIVGGILGDYPRRHRTREELTPRFPDAEVRHLGPYHFSIDGALRVALTVLECGVPLEEIQVVERPEIEVAPGHTV RLDCDYPSEGKPMLPEGLVEYLKEGIVDYEEAEFSARRRWRHRNDGVEGDP >Mature_210_residues SVAIVEHLDRWSPWLDLEYMEAYRTARKHGWEFTVTNADPEVLAKAKYPALPYSASKLPLRGDRVIVLDPDAEDPLTPED DPDVVIVGGILGDYPRRHRTREELTPRFPDAEVRHLGPYHFSIDGALRVALTVLECGVPLEEIQVVERPEIEVAPGHTVR LDCDYPSEGKPMLPEGLVEYLKEGIVDYEEAEFSARRRWRHRNDGVEGDP
Specific function: Unknown
COG id: COG2428
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324595, Length=203, Percent_Identity=30.0492610837438, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24020; Mature: 23889
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAIVEHLDRWSPWLDLEYMEAYRTARKHGWEFTVTNADPEVLAKAKYPALPYSASKLP CCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCCCCC LRGDRVIVLDPDAEDPLTPEDDPDVVIVGGILGDYPRRHRTREELTPRFPDAEVRHLGPY CCCCEEEEECCCCCCCCCCCCCCCEEEECCHHCCCCHHHCCHHHCCCCCCCCHHHHCCCE HFSIDGALRVALTVLECGVPLEEIQVVERPEIEVAPGHTVRLDCDYPSEGKPMLPEGLVE EEEHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCHHHHHH YLKEGIVDYEEAEFSARRRWRHRNDGVEGDP HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SVAIVEHLDRWSPWLDLEYMEAYRTARKHGWEFTVTNADPEVLAKAKYPALPYSASKLP CCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCCCCC LRGDRVIVLDPDAEDPLTPEDDPDVVIVGGILGDYPRRHRTREELTPRFPDAEVRHLGPY CCCCEEEEECCCCCCCCCCCCCCCEEEECCHHCCCCHHHCCHHHCCCCCCCCHHHHCCCE HFSIDGALRVALTVLECGVPLEEIQVVERPEIEVAPGHTVRLDCDYPSEGKPMLPEGLVE EEEHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCHHHHHH YLKEGIVDYEEAEFSARRRWRHRNDGVEGDP HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA