| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is yheS [C]
Identifier: 20093531
GI number: 20093531
Start: 83902
End: 85701
Strand: Direct
Name: yheS [C]
Synonym: MK0091
Alternate gene names: 20093531
Gene position: 83902-85701 (Clockwise)
Preceding gene: 20093530
Following gene: 20093537
Centisome position: 4.95
GC content: 60.72
Gene sequence:
>1800_bases GTGGTATCGATCGGCAGGAGGGTAGCAGTCGTGGACAGGGAGCGGTGCAAAGGAGGATCCAAATGCGACTACGTCTGCCA ACGTTTCTGCCCTGGGGTCAGGACAGGGCGTGAGACCATCACGATCGACGAGGACACCAACAAGCCCGTGATCTCCGAGG AACTGTGCTCCGGCTGCGGTATCTGCGCCCAGAAGTGTCCCTTCGATGCGATCAAAGTTGTACGCCTCCCCGAGGAGCTA GAGGAAGAATGCGTACACAAGTACGAGGAGGGAGGGTTCCGACTCTACAGGCTCCCCGTTCCCAAACCCGGGAAGGTCAC CGGCGTGATCGGACGCAACGCGATCGGTAAGACCACCGCCGCTAAGATACTCACAGGAGAGCTCAAACCCAACCTAGGGG ATCCTGAAGCGGACCCCGACTGGGACGAGGTGATCCGAGCATTTTCGGGCACGGAGCTCCAGGAACACTTCCGACGTATC GCGGACGGTGATCTCCGACCCGTCATGAAGCCGCAGTACGTCGAGGCCCTGCCCAAGGTCGTTAAGGGCCGGGTGAAGGA CGTCCTCGAGGACGTAGACGAGCTCGGGGTTGTCGACGAGCTCATCGAGCGCCTCGGACTGACCGAGGTGACCGACCGAC GGATCTCCGACCTCAGCGGTGGAGAGCTGCAGCGTGTCGCTATCGCCGCGGCACTCTCTCGAGACGCGGACTTCCTGGTT TTCGACGAACCGTGTAGCTACCTCGACGTCGAACAACGACTCTCGCTGGCCCGGTCACTCCGTGAGATCGTCGAGGATCG AGGTATTCCGATGCTCGTCATCGAGCACGACTTAGCCACACTGGACTACGTCGCCGACGTGGTGCACGTCCTCTATGGAA AGCGTGGTGCGTACGGTGTGGTGTCCAAGCCGATGGGTGTAGGCAAGGGGATCAACGCGTACCTGAAGGGTTACTTGGAG GCCGAGAACGTCCGCTTCCGGGACGAGGAAGTGGTGCTCCCGGAGAAACCGGCGGAGGCCGAGGCGGGTGAGCGAGACAC CCTCGTGGAGTACGGCGAGCTCGTCAAGGAATACGACGGCGACTTCAGGCTCGAAGTGGAGCCGGGCGAAATTCGTGTCG GGGAGATCATCGGAGCCCTCGGGCCTAACGCCATCGGTAAGACGACCTTCGTTAAGCTCCTGGCCGGAGTACTCGAGCCT ACCGGAGGAGGAGTCGATGTCGACGTTAAGGTCTCGTACAAGCCGCAGTACCTGGAGGTGGATTCGGATGAACCCGTCGA GCAAGTGCTACGAAGGACCGCCGGTTCGGAGTGGGGATCGAGCTGGTACCGGAGCAACATCGTGGAGCCACTGGACTTAG AGTACCTGTTCGATAGACCCTTGTGTGAGCTGAGCGGCGGTGAGCTGCAGCGCGTAGCCGTGGCGGCCGCCCTATCCCGG GAAGCCGATCTGTACCTTCTAGACGAGCCTAGCGCGTATTTGGACGTTGAAGAGAGGATCAACACCGCCCGCGTCATCAG ACGGGTGATCGAAGCACGGGATGCTGCCGCCATCGTAGTCGACCACGACTTACTCCTGCTAGACTACATCAGTGACAGGA TGATGGTGTTCGAAGGCGAGCCAGGAAAGCACGGACGTGCGAATCCGCCGGAGAGTAAACGGGAAGCCATGAACAGGTTT CTGTCGAACTTAGGCGTGACGTTCAGGCGGGACCCGGAGACACGGAGGCCGAGAGCCAACAAGCCCGGCAGTCACCGTGA CCGTGAACAGAAGCGTCGTGGTGAGTACTTCTACGCGTAG
Upstream 100 bases:
>100_bases GCGTATCGGCGGCGCCAAGGGCTGGTTAGCGTACGGTCTAGGGGCGTACCTCTCGGCGTGGATACTAGTTTGGACGTACT TCATTAACCGGTAATCGGGG
Downstream 100 bases:
>100_bases GGGACCTCCCACGGCACTAGCCGACGAAAACGCGTCGGTCTCGAGCTCCACCGATTCTCGGACAGCAACATACCCCGACA ACGTCCCGGAGGCCCTTTAT
Product: putative ATPase RIL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MVSIGRRVAVVDRERCKGGSKCDYVCQRFCPGVRTGRETITIDEDTNKPVISEELCSGCGICAQKCPFDAIKVVRLPEEL EEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTAAKILTGELKPNLGDPEADPDWDEVIRAFSGTELQEHFRRI ADGDLRPVMKPQYVEALPKVVKGRVKDVLEDVDELGVVDELIERLGLTEVTDRRISDLSGGELQRVAIAAALSRDADFLV FDEPCSYLDVEQRLSLARSLREIVEDRGIPMLVIEHDLATLDYVADVVHVLYGKRGAYGVVSKPMGVGKGINAYLKGYLE AENVRFRDEEVVLPEKPAEAEAGERDTLVEYGELVKEYDGDFRLEVEPGEIRVGEIIGALGPNAIGKTTFVKLLAGVLEP TGGGVDVDVKVSYKPQYLEVDSDEPVEQVLRRTAGSEWGSSWYRSNIVEPLDLEYLFDRPLCELSGGELQRVAVAAALSR EADLYLLDEPSAYLDVEERINTARVIRRVIEARDAAAIVVDHDLLLLDYISDRMMVFEGEPGKHGRANPPESKREAMNRF LSNLGVTFRRDPETRRPRANKPGSHRDREQKRRGEYFYA
Sequences:
>Translated_599_residues MVSIGRRVAVVDRERCKGGSKCDYVCQRFCPGVRTGRETITIDEDTNKPVISEELCSGCGICAQKCPFDAIKVVRLPEEL EEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTAAKILTGELKPNLGDPEADPDWDEVIRAFSGTELQEHFRRI ADGDLRPVMKPQYVEALPKVVKGRVKDVLEDVDELGVVDELIERLGLTEVTDRRISDLSGGELQRVAIAAALSRDADFLV FDEPCSYLDVEQRLSLARSLREIVEDRGIPMLVIEHDLATLDYVADVVHVLYGKRGAYGVVSKPMGVGKGINAYLKGYLE AENVRFRDEEVVLPEKPAEAEAGERDTLVEYGELVKEYDGDFRLEVEPGEIRVGEIIGALGPNAIGKTTFVKLLAGVLEP TGGGVDVDVKVSYKPQYLEVDSDEPVEQVLRRTAGSEWGSSWYRSNIVEPLDLEYLFDRPLCELSGGELQRVAVAAALSR EADLYLLDEPSAYLDVEERINTARVIRRVIEARDAAAIVVDHDLLLLDYISDRMMVFEGEPGKHGRANPPESKREAMNRF LSNLGVTFRRDPETRRPRANKPGSHRDREQKRRGEYFYA >Mature_599_residues MVSIGRRVAVVDRERCKGGSKCDYVCQRFCPGVRTGRETITIDEDTNKPVISEELCSGCGICAQKCPFDAIKVVRLPEEL EEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTAAKILTGELKPNLGDPEADPDWDEVIRAFSGTELQEHFRRI ADGDLRPVMKPQYVEALPKVVKGRVKDVLEDVDELGVVDELIERLGLTEVTDRRISDLSGGELQRVAIAAALSRDADFLV FDEPCSYLDVEQRLSLARSLREIVEDRGIPMLVIEHDLATLDYVADVVHVLYGKRGAYGVVSKPMGVGKGINAYLKGYLE AENVRFRDEEVVLPEKPAEAEAGERDTLVEYGELVKEYDGDFRLEVEPGEIRVGEIIGALGPNAIGKTTFVKLLAGVLEP TGGGVDVDVKVSYKPQYLEVDSDEPVEQVLRRTAGSEWGSSWYRSNIVEPLDLEYLFDRPLCELSGGELQRVAVAAALSR EADLYLLDEPSAYLDVEERINTARVIRRVIEARDAAAIVVDHDLLLLDYISDRMMVFEGEPGKHGRANPPESKREAMNRF LSNLGVTFRRDPETRRPRANKPGSHRDREQKRRGEYFYA
Specific function: Unknown
COG id: COG1245
COG function: function code R; Predicted ATPase, RNase L inhibitor (RLI) homolog
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI108773784, Length=594, Percent_Identity=44.9494949494949, Blast_Score=534, Evalue=1e-152, Organism=Homo sapiens, GI108773782, Length=594, Percent_Identity=44.9494949494949, Blast_Score=534, Evalue=1e-152, Organism=Escherichia coli, GI1789751, Length=556, Percent_Identity=24.1007194244604, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI2367384, Length=519, Percent_Identity=26.2042389210019, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1788165, Length=197, Percent_Identity=29.9492385786802, Blast_Score=83, Evalue=7e-17, Organism=Escherichia coli, GI1787758, Length=190, Percent_Identity=28.9473684210526, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1788761, Length=237, Percent_Identity=29.535864978903, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1789962, Length=198, Percent_Identity=28.7878787878788, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787182, Length=503, Percent_Identity=24.4532803180915, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87081791, Length=196, Percent_Identity=29.0816326530612, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1789891, Length=193, Percent_Identity=26.4248704663212, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1786803, Length=205, Percent_Identity=25.8536585365854, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI87081782, Length=231, Percent_Identity=29.004329004329, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI145693107, Length=216, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1787029, Length=193, Percent_Identity=31.6062176165803, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1787500, Length=214, Percent_Identity=26.1682242990654, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790739, Length=207, Percent_Identity=25.6038647342995, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI87081709, Length=202, Percent_Identity=30.1980198019802, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1786398, Length=200, Percent_Identity=32, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1787712, Length=201, Percent_Identity=26.3681592039801, Blast_Score=63, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17555800, Length=593, Percent_Identity=44.3507588532884, Blast_Score=525, Evalue=1e-149, Organism=Saccharomyces cerevisiae, GI6320296, Length=607, Percent_Identity=43.163097199341, Blast_Score=506, Evalue=1e-144, Organism=Saccharomyces cerevisiae, GI6324314, Length=327, Percent_Identity=26.2996941896024, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6323278, Length=234, Percent_Identity=28.6324786324786, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24661270, Length=593, Percent_Identity=43.5075885328836, Blast_Score=523, Evalue=1e-148, Organism=Drosophila melanogaster, GI21355589, Length=593, Percent_Identity=43.5075885328836, Blast_Score=523, Evalue=1e-148,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013283 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR007209 [H]
Pfam domain/function: PF00005 ABC_tran; PF04068 RLI [H]
EC number: NA
Molecular weight: Translated: 66849; Mature: 66849
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSIGRRVAVVDRERCKGGSKCDYVCQRFCPGVRTGRETITIDEDTNKPVISEELCSGCG CCCCCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCCC ICAQKCPFDAIKVVRLPEELEEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTA CHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCCHHH AKILTGELKPNLGDPEADPDWDEVIRAFSGTELQEHFRRIADGDLRPVMKPQYVEALPKV HHHEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH VKGRVKDVLEDVDELGVVDELIERLGLTEVTDRRISDLSGGELQRVAIAAALSRDADFLV HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE FDEPCSYLDVEQRLSLARSLREIVEDRGIPMLVIEHDLATLDYVADVVHVLYGKRGAYGV ECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCC VSKPMGVGKGINAYLKGYLEAENVRFRDEEVVLPEKPAEAEAGERDTLVEYGELVKEYDG CCCCCCCCCCHHHHHHHHHHHCCCEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCC DFRLEVEPGEIRVGEIIGALGPNAIGKTTFVKLLAGVLEPTGGGVDVDVKVSYKPQYLEV CEEEEECCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEC DSDEPVEQVLRRTAGSEWGSSWYRSNIVEPLDLEYLFDRPLCELSGGELQRVAVAAALSR CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHHHCC EADLYLLDEPSAYLDVEERINTARVIRRVIEARDAAAIVVDHDLLLLDYISDRMMVFEGE CCCEEEEECCCHHEEHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEEECC PGKHGRANPPESKREAMNRFLSNLGVTFRRDPETRRPRANKPGSHRDREQKRRGEYFYA CCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure MVSIGRRVAVVDRERCKGGSKCDYVCQRFCPGVRTGRETITIDEDTNKPVISEELCSGCG CCCCCCEEEEEEHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHCCCC ICAQKCPFDAIKVVRLPEELEEECVHKYEEGGFRLYRLPVPKPGKVTGVIGRNAIGKTTA CHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCCHHH AKILTGELKPNLGDPEADPDWDEVIRAFSGTELQEHFRRIADGDLRPVMKPQYVEALPKV HHHEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHH VKGRVKDVLEDVDELGVVDELIERLGLTEVTDRRISDLSGGELQRVAIAAALSRDADFLV HHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEE FDEPCSYLDVEQRLSLARSLREIVEDRGIPMLVIEHDLATLDYVADVVHVLYGKRGAYGV ECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCC VSKPMGVGKGINAYLKGYLEAENVRFRDEEVVLPEKPAEAEAGERDTLVEYGELVKEYDG CCCCCCCCCCHHHHHHHHHHHCCCEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCC DFRLEVEPGEIRVGEIIGALGPNAIGKTTFVKLLAGVLEPTGGGVDVDVKVSYKPQYLEV CEEEEECCCCEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEC DSDEPVEQVLRRTAGSEWGSSWYRSNIVEPLDLEYLFDRPLCELSGGELQRVAVAAALSR CCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCCHHCCCCHHHHHHHHHHHCC EADLYLLDEPSAYLDVEERINTARVIRRVIEARDAAAIVVDHDLLLLDYISDRMMVFEGE CCCEEEEECCCHHEEHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCEEEEECC PGKHGRANPPESKREAMNRFLSNLGVTFRRDPETRRPRANKPGSHRDREQKRRGEYFYA CCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]